3LUM - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Biological Unit 7 (Jmol Viewer)

Title :   STRUCTURE OF ULILYSIN MUTANT M290L

Authors :   C. Tallant, R. Garcia-Castellanos, U. Baumann, F. X. Gomis-Ruth

Date :   18 Feb 10 (Deposition) - 02 Mar 10 (Release) - 19 May 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: A,C  (1x)
Biol. Unit 6: B  (2x)
Biol. Unit 7: D  (2x)

Keywords :   Metallopeptidase, Hydrolase, Metal Ion Binding, Calcium Ion Binding, Calcium, Disulfide Bond, Metal-Binding, Metalloprotease, Protease, Zinc, Zymogen (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Tallant, R. Garcia-Castellanos, U. Baumann, F. X. Gomis-Ruth
On The Relevance Of The Met-Turn Methionine In Metzincins.
J. Biol. Chem. V. 285 13951 2010
PubMed-ID: 20202937 | Reference-DOI: 10.1074/JBC.M109.083378

Molecule 1 - ULILYSIN
	Chains	:	A, B, C, D
	EC Number	:	3.4.24.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A
	Expression System Strain	:	BL21(DE3) STAR
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 61-322
	Gene	:	MA_3214
	Mutation	:	YES
	Organism Scientific	:	METHANOSARCINA ACETIVORANS
	Organism Taxid	:	2214

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:	A		C
Biological Unit 6 (2x)	:		B
Biological Unit 7 (2x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 32)

No.	Name	Count	Type	Full Name
1	ARG	4	Mod. Amino Acid	ARGININE
2	CA	11	Ligand/Ion	CALCIUM ION
3	GOL	9	Ligand/Ion	GLYCEROL
4	VAL	4	Mod. Amino Acid	VALINE
5	ZN	4	Ligand/Ion	ZINC ION

Biological Unit 1 (3, 3)

No.	Name	Count	Type	Full Name
1	ARG	1	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	1	Ligand/Ion	GLYCEROL
4	VAL	1	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (3, 4)

No.	Name	Count	Type	Full Name
1	ARG	1	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	2	Ligand/Ion	GLYCEROL
4	VAL	1	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 3 (3, 7)

No.	Name	Count	Type	Full Name
1	ARG	1	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	5	Ligand/Ion	GLYCEROL
4	VAL	1	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 4 (3, 3)

No.	Name	Count	Type	Full Name
1	ARG	1	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	1	Ligand/Ion	GLYCEROL
4	VAL	1	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 5 (3, 10)

No.	Name	Count	Type	Full Name
1	ARG	2	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	6	Ligand/Ion	GLYCEROL
4	VAL	2	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 6 (3, 8)

No.	Name	Count	Type	Full Name
1	ARG	2	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	4	Ligand/Ion	GLYCEROL
4	VAL	2	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 7 (3, 6)

No.	Name	Count	Type	Full Name
1	ARG	2	Mod. Amino Acid	ARGININE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	2	Ligand/Ion	GLYCEROL
4	VAL	2	Mod. Amino Acid	VALINE
5	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (32, 32)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS A:228 , HIS A:232 , HIS A:238 , HOH A:1421	BINDING SITE FOR RESIDUE ZN A 999
02	AC2	SOFTWARE	TRP A:240 , GLU A:243 , PRO A:249 , GLN A:262 , ALA A:263 , HOH A:413	BINDING SITE FOR RESIDUE CA A 997
03	AC3	SOFTWARE	ASP A:254 , VAL A:256 , THR A:259 , HOH A:354 , HOH A:359 , HOH A:409 , HOH A:554	BINDING SITE FOR RESIDUE CA A 998
04	AC4	SOFTWARE	ASP A:152 , HOH A:397 , HOH A:400 , HOH A:466 , ASP C:152 , HOH C:497	BINDING SITE FOR RESIDUE CA A 1401
05	AC5	SOFTWARE	PRO A:68 , THR A:127 , LYS A:128 , TYR A:170 , HOH A:891	BINDING SITE FOR RESIDUE GOL A 1404
06	AC6	SOFTWARE	ILE A:187 , LEU A:188 , GLY A:189 , PHE A:220 , ARG A:224 , THR A:225 , GLU A:229 , VAL A:293 , ASP A:295 , VAL A:502 , HOH A:741 , HOH A:1421 , HOH A:1425	BINDING SITE FOR RESIDUE ARG A 501
07	AC7	SOFTWARE	ARG A:501 , HOH A:741 , HOH A:818 , HOH A:1378	BINDING SITE FOR RESIDUE VAL A 502
08	AC8	SOFTWARE	PRO B:68 , THR B:127 , LYS B:128 , TYR B:170 , HOH B:1143	BINDING SITE FOR RESIDUE GOL B 1405
09	AC9	SOFTWARE	GLY B:195 , GLY B:196 , ALA B:198 , PRO B:316 , ARG B:317	BINDING SITE FOR RESIDUE GOL B 1406
10	BC1	SOFTWARE	HIS B:228 , HIS B:232 , HIS B:238 , HOH B:1422	BINDING SITE FOR RESIDUE ZN B 999
11	BC2	SOFTWARE	TRP B:240 , GLU B:243 , PRO B:249 , GLN B:262 , ALA B:263 , HOH B:354	BINDING SITE FOR RESIDUE CA B 997
12	BC3	SOFTWARE	ASP B:254 , VAL B:256 , THR B:259 , HOH B:341 , HOH B:367 , HOH B:449 , HOH B:480	BINDING SITE FOR RESIDUE CA B 998
13	BC4	SOFTWARE	ASP B:152 , HOH B:481 , HOH B:484	BINDING SITE FOR RESIDUE CA B 1401
14	BC5	SOFTWARE	ILE B:187 , LEU B:188 , GLY B:189 , PHE B:220 , THR B:225 , GLU B:229 , VAL B:293 , ASP B:295 , VAL B:502 , HOH B:1399 , HOH B:1422	BINDING SITE FOR RESIDUE ARG B 501
15	BC6	SOFTWARE	PHE B:267 , TYR B:292 , ARG B:501 , HOH B:820 , HOH B:1230 , HOH B:1399	BINDING SITE FOR RESIDUE VAL B 502
16	BC7	SOFTWARE	PRO C:68 , THR C:127 , LYS C:128 , TYR C:170 , HOH C:1129	BINDING SITE FOR RESIDUE GOL C 1402
17	BC8	SOFTWARE	THR C:139 , TRP C:165 , HOH C:379 , HOH C:671 , HOH C:685 , HOH C:861 , ARG D:140	BINDING SITE FOR RESIDUE GOL C 1403
18	BC9	SOFTWARE	PRO C:194 , GLY C:195 , GLY C:196 , ASP C:201 , PRO C:316 , ARG C:317 , HOH C:981 , HOH C:1315	BINDING SITE FOR RESIDUE GOL C 1407
19	CC1	SOFTWARE	ARG C:140 , HOH C:394 , HOH C:552 , HOH C:574 , THR D:139 , TRP D:165 , HOH D:553 , HOH D:1198	BINDING SITE FOR RESIDUE GOL C 1408
20	CC2	SOFTWARE	GLN B:303 , GLN C:303 , HOH C:786 , HOH C:1100	BINDING SITE FOR RESIDUE GOL C 1410
21	CC3	SOFTWARE	HIS C:228 , HIS C:232 , HIS C:238 , HOH C:1423	BINDING SITE FOR RESIDUE ZN C 999
22	CC4	SOFTWARE	TRP C:240 , GLU C:243 , PRO C:249 , GLN C:262 , ALA C:263 , HOH C:349	BINDING SITE FOR RESIDUE CA C 997
23	CC5	SOFTWARE	ASP C:254 , VAL C:256 , THR C:259 , HOH C:355 , HOH C:365 , HOH C:404 , HOH C:567	BINDING SITE FOR RESIDUE CA C 998
24	CC6	SOFTWARE	ILE C:187 , LEU C:188 , GLY C:189 , PHE C:220 , ARG C:224 , THR C:225 , GLU C:229 , VAL C:293 , ASP C:295 , VAL C:502 , HOH C:797 , HOH C:1423 , HOH C:1428	BINDING SITE FOR RESIDUE ARG C 501
25	CC7	SOFTWARE	GLN C:185 , TYR C:292 , ARG C:501 , HOH C:797 , HOH C:843 , HOH C:1134 , HOH C:1296	BINDING SITE FOR RESIDUE VAL C 502
26	CC8	SOFTWARE	PRO D:68 , THR D:127 , LYS D:128 , TYR D:170 , HOH D:1080	BINDING SITE FOR RESIDUE GOL D 1409
27	CC9	SOFTWARE	HIS D:228 , HIS D:232 , HIS D:238 , HOH D:1424	BINDING SITE FOR RESIDUE ZN D 999
28	DC1	SOFTWARE	TRP D:240 , GLU D:243 , PRO D:249 , GLN D:262 , ALA D:263 , HOH D:398	BINDING SITE FOR RESIDUE CA D 997
29	DC2	SOFTWARE	ASP D:254 , VAL D:256 , THR D:259 , HOH D:326 , HOH D:346 , HOH D:369 , HOH D:387	BINDING SITE FOR RESIDUE CA D 998
30	DC3	SOFTWARE	ASP D:152 , HOH D:359 , HOH D:620	BINDING SITE FOR RESIDUE CA D 1401
31	DC4	SOFTWARE	ILE D:187 , LEU D:188 , GLY D:189 , THR D:225 , GLU D:229 , VAL D:293 , ASP D:295 , VAL D:502 , HOH D:1424 , HOH D:1432 , HOH D:1433	BINDING SITE FOR RESIDUE ARG D 501
32	DC5	SOFTWARE	GLN D:185 , ARG D:501 , HOH D:1386 , HOH D:1431 , HOH D:1432	BINDING SITE FOR RESIDUE VAL D 502

Asymmetric Unit

No.	Residues
1	A:250	-	A:277
2	A:269	-	A:297
3	B:250	-	B:277
4	B:269	-	B:297
5	C:250	-	C:277
6	C:269	-	C:297
7	D:250	-	D:277
8	D:269	-	D:297

Asymmetric Unit

No.	Residues
1	Pro A:218	-	Pro A:219
2	Tyr A:272	-	Pro A:273
3	Gly A:280	-	Pro A:281
4	Pro B:218	-	Pro B:219
5	Tyr B:272	-	Pro B:273
6	Gly B:280	-	Pro B:281
7	Pro C:218	-	Pro C:219
8	Tyr C:272	-	Pro C:273
9	Gly C:280	-	Pro C:281
10	Pro D:218	-	Pro D:219
11	Tyr D:272	-	Pro D:273
12	Gly D:280	-	Pro D:281

(no "SAP(SNP)/Variant" information available for 3LUM)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	4	A:225-234 B:225-234 C:225-234 D:225-234

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	1	A:225-234 - - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	1	- B:225-234 - -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	1	- - C:225-234 -

Biological Unit 4 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	1	- - - D:225-234

Biological Unit 5 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	2	A:225-234 - C:225-234 -

Biological Unit 6 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	2	- B:225-234 - -

Biological Unit 7 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	ULIL_METAC	225-234	2	- - - D:225-234

(no "Exon" information available for 3LUM)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:262
 aligned with ULIL_METAC | Q8TL28 from UniProtKB/Swiss-Prot  Length:342

    Alignment length:262
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  
           ULIL_METAC    61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYMDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee.hhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh....eeeee............eeeee.....ee..hhhhhhhhh..........eeeeee..ee.....ee.eee.....hhhhh.eeee.hhh............hhhhhhhhhhhh...........................................................hhhhh...hhhhhhhhhhhhhh.hhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lum A  61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYLDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain B from PDB  Type:PROTEIN  Length:262
 aligned with ULIL_METAC | Q8TL28 from UniProtKB/Swiss-Prot  Length:342

    Alignment length:262
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  
           ULIL_METAC    61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYMDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee.hhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh....eeeee............eeeee.....ee..hhhhhhhhh..........eeeeee..ee........eee.....hhhhh.eeee.hhh............hhhhhhhhhhhh...........................................................hhhhh...hhhhhhhhhhhhhh.hhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lum B  61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYLDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain C from PDB  Type:PROTEIN  Length:262
 aligned with ULIL_METAC | Q8TL28 from UniProtKB/Swiss-Prot  Length:342

    Alignment length:262
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  
           ULIL_METAC    61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYMDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee.hhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh....eeeee............eeeee.....ee..hhhhhhhhh..........eeeeee..ee.....ee.eee.....hhhhh.eeee.hhh............hhhhhhhhhhhh...........................................................hhhhh...hhhhhhhhhhhhhh.hhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lum C  61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYLDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Chain D from PDB  Type:PROTEIN  Length:262
 aligned with ULIL_METAC | Q8TL28 from UniProtKB/Swiss-Prot  Length:342

    Alignment length:262
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320  
           ULIL_METAC    61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYMDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee.hhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh....eeeee............eeeee.....ee..hhhhhhhhh..........eeeeee..ee.....ee.eee.....hhhhh.eeee.hhh............hhhhhhhhhhhh...........................................................hhhhh...hhhhhhhhhhhhhh.hhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lum D  61 RMEIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGIEFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKSEIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWGDELRFEDPCSRSDEVDDTPNQADPNFGCPSYPHVSCSNGPNGDMFMNYLDYVDDKCMVMFTQGQATRVNACLDGPRSSFLA 322
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3LUM)

(no "CATH Domain" information available for 3LUM)

(no "Pfam Domain" information available for 3LUM)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (ULIL_METAC | Q8TL28)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008237	metallopeptidase activity	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
biological process
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		ARG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		CA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
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		ZN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
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	Cis Peptide Bonds
		Gly A:280 - Pro A:281	[ RasMol ]
		Gly B:280 - Pro B:281	[ RasMol ]
		Gly C:280 - Pro C:281	[ RasMol ]
		Gly D:280 - Pro D:281	[ RasMol ]
		Pro A:218 - Pro A:219	[ RasMol ]
		Pro B:218 - Pro B:219	[ RasMol ]
		Pro C:218 - Pro C:219	[ RasMol ]
		Pro D:218 - Pro D:219	[ RasMol ]
		Tyr A:272 - Pro A:273	[ RasMol ]
		Tyr B:272 - Pro B:273	[ RasMol ]
		Tyr C:272 - Pro C:273	[ RasMol ]
		Tyr D:272 - Pro D:273	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]
		Biological Unit 5	[ Jena3D ]
		Biological Unit 6	[ Jena3D ]
		Biological Unit 7	[ Jena3D ]

Jmol
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Access by PDB/NDB ID
	3lum
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		Orientation in Membranes	:	OPM
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	3.4.24.-
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UniProtKB/Swiss-Prot
	ULIL_METAC \| Q8TL28	:	2cki 2j83 3lun

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 32)

Sites (32, 32)

SS Bonds (8, 8)

Cis Peptide Bonds (12, 12)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (5, 5)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File