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(-) Description

Title :  CRYSTAL STRUCTURE OF CBS DOMAIN-CONTAINING PROTEIN OF UNKNOWN FUNCTION FROM BACILLUS ANTHRACIS STR. AMES ANCESTOR
 
Authors :  Y. Kim, R. Mulligan, J. Hasseman, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Date :  09 Feb 10  (Deposition) - 02 Mar 10  (Release) - 02 Mar 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Cbs Domain, Csgid, Structural Genomics, Unknown Function, Center For Structural Genomics Of Infectious Diseases (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Kim, R. Mulligan, J. Hasseman, W. F. Anderson, A. Joachimiak
Crystal Structure Of Cbs Domain-Containing Protein Of Unknown Function From Bacillus Anthracis Str. Ames Ancestor
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CBS DOMAIN PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21 MAGIC
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: BAS3893, BA_4196, GBAA4196, GBAA_4196
    Organism Common: ANTHRAX
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 1392
    Strain: AMES ANCESTOR

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric Unit (3, 11)
No.NameCountTypeFull Name
1FMT4Ligand/IonFORMIC ACID
2GOL1Ligand/IonGLYCEROL
3SO46Ligand/IonSULFATE ION
Biological Unit 1 (3, 22)
No.NameCountTypeFull Name
1FMT8Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
3SO412Ligand/IonSULFATE ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:91 , GLN A:92 , ASP A:93 , HOH A:175BINDING SITE FOR RESIDUE SO4 A 161
02AC2SOFTWAREASN A:31 , GLY A:32 , HIS A:35 , HOH A:155 , HOH A:207BINDING SITE FOR RESIDUE SO4 A 162
03AC3SOFTWAREILE A:19 , THR A:130 , ARG A:132 , ALA A:133 , HOH A:148BINDING SITE FOR RESIDUE SO4 A 163
04AC4SOFTWARESER A:21 , HIS A:26 , TYR A:55 , LYS A:85 , HOH A:183 , HOH A:240 , HOH A:241BINDING SITE FOR RESIDUE SO4 A 164
05AC5SOFTWAREGLN A:28 , ILE A:29 , ASN A:31 , HIS A:35 , HIS A:58 , HOH A:172 , HOH A:238 , HOH A:239BINDING SITE FOR RESIDUE SO4 A 165
06AC6SOFTWAREMET A:109 , ARG A:132 , LYS A:136BINDING SITE FOR RESIDUE SO4 A 166
07AC7SOFTWARELEU A:40 , GLY A:44 , TYR A:45 , THR A:63 , HOH A:176BINDING SITE FOR RESIDUE FMT A 167
08AC8SOFTWARESER A:43BINDING SITE FOR RESIDUE FMT A 168
09AC9SOFTWAREHIS A:26 , GLN A:28 , LYS A:42 , ASP A:52 , TYR A:55BINDING SITE FOR RESIDUE FMT A 169
10BC1SOFTWARESER A:102 , LYS A:105BINDING SITE FOR RESIDUE FMT A 170
11BC2SOFTWAREASP A:68 , GLY A:69 , LEU A:71 , ARG A:80 , MET A:84 , GLN A:88 , VAL A:89 , HOH A:158 , HOH A:186BINDING SITE FOR RESIDUE GOL A 171

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3LQN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3LQN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3LQN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3LQN)

(-) Exons   (0, 0)

(no "Exon" information available for 3LQN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:138
 aligned with Q81MQ0_BACAN | Q81MQ0 from UniProtKB/TrEMBL  Length:147

    Alignment length:138
                                    14        24        34        44        54        64        74        84        94       104       114       124       134        
         Q81MQ0_BACAN     5 PKDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPFICAVNEDGYFEGILTRRAILKLLNKKV 142
               SCOP domains d3lqna_ A: automated matches                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------CBS-3lqnA01 A:86-140                                   -- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhee.hhh.......hhhhhhhhhhhhh..eeeee.....eeeeeehhhhhhhh......hhhhhhhhhhhhh......eee...hhhhhhhhhh...eeeee.....eeeeeehhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3lqn A   5 PKDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPFICAVNEDGYFEGILTRRAILKLLNKKV 142
                                    14        24        34        44        54        64        74        84        94       104       114       124       134
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3LQN)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: CBS] (51)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q81MQ0_BACAN | Q81MQ0)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

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