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(-) Description

Title :  CRYSTAL STRUCTURE OF RV3275C-E60A FROM MYCOBACTERIUM TUBERCULOSIS AT 1.7A RESOLUTION
 
Authors :  H. Kim, M. Yu, L. -W. Hung, T. C. Terwilliger, C. -Y. Kim, Integrated Cen Structure And Function Innovation (Isfi), Tb Structural Geno Consortium (Tbsgc)
Date :  04 Feb 10  (Deposition) - 16 Jun 10  (Release) - 16 Jun 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B,C,D  (2x)
Biol. Unit 2:  A (1x),B (1x),C (1x),D (1x)
Keywords :  Alpha And Beta Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Integrated Center For Structure And Function Innovation, Isfi, Tb Structural Genomics Consortium, Tbsgc, Decarboxylase, Lyase, Purine Biosynthesis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Kim, M. Yu, L. -W. Hung, T. C. Terwilliger, C. -Y. Kim
Crystal Structure Of Rv3275C-E60A From Mycobacterium Tuberculosis At 1. 7A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE CATALYTIC SUBUNIT
    Chains: A, B, C, D
    EC Number: 4.1.1.21
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: CUSTOM
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MT3375, MTCY71.15C, PURE, RV3275C
    Mutation: YES
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 1773
    Strain: H37RV
    Synonym: AIR CARBOXYLASE, AIRC

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (2x): ABCD
Biological Unit 2 (1x): A (1x)B (1x)C (1x)D (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 24)

Asymmetric Unit (2, 24)
No.NameCountTypeFull Name
1FMT22Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
Biological Unit 1 (2, 48)
No.NameCountTypeFull Name
1FMT44Ligand/IonFORMIC ACID
2GOL4Ligand/IonGLYCEROL
Biological Unit 2 (2, 12)
No.NameCountTypeFull Name
1FMT11Ligand/IonFORMIC ACID
2GOL1Ligand/IonGLYCEROL

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:19 , GLY A:71BINDING SITE FOR RESIDUE FMT A 175
02AC2SOFTWAREARG A:56 , ALA A:82 , HOH C:325 , FMT D:175BINDING SITE FOR RESIDUE FMT A 176
03AC3SOFTWAREGLY A:15 , SER A:43 , ALA A:44 , HIS A:45 , ARG A:46 , HOH A:188 , HOH A:400BINDING SITE FOR RESIDUE FMT A 177
04AC4SOFTWARETHR A:47 , PRO A:48 , GLU A:49 , ALA A:50 , HOH A:224BINDING SITE FOR RESIDUE FMT A 178
05AC5SOFTWAREGLY B:15 , ASP B:19 , ALA B:70 , GLY B:71 , LEU B:95BINDING SITE FOR RESIDUE GOL B 175
06AC6SOFTWAREFMT B:178 , THR C:47 , PRO C:48 , GLU C:49 , ALA C:50BINDING SITE FOR RESIDUE FMT B 176
07AC7SOFTWARETHR B:47 , PRO B:48 , GLU B:49 , ALA B:50 , GOL C:175 , HOH C:238 , HOH C:355BINDING SITE FOR RESIDUE FMT B 177
08AC8SOFTWAREARG B:56 , ALA B:82 , FMT B:176BINDING SITE FOR RESIDUE FMT B 178
09AC9SOFTWAREVAL B:41BINDING SITE FOR RESIDUE FMT B 179
10BC1SOFTWAREGLY B:15 , SER B:43 , ALA B:44 , HIS B:45 , ARG B:46 , FMT B:182 , HOH B:187BINDING SITE FOR RESIDUE FMT B 180
11BC2SOFTWARELYS A:160 , SER B:16 , ASP B:17 , ARG B:46 , HOH B:349BINDING SITE FOR RESIDUE FMT B 181
12BC3SOFTWAREHIS B:45 , ARG B:46 , FMT B:180 , HOH B:209 , PRO C:111 , HOH C:211BINDING SITE FOR RESIDUE FMT B 182
13BC4SOFTWAREGLN A:150 , ASP A:151 , HOH A:192 , HOH A:285 , PRO B:48 , FMT B:177 , ARG C:56 , ALA C:82 , ALA C:83 , HOH C:204 , HOH C:332BINDING SITE FOR RESIDUE GOL C 175
14BC5SOFTWAREASP C:19 , ALA C:70 , GLY C:71BINDING SITE FOR RESIDUE FMT C 176
15BC6SOFTWAREGLU C:32 , PHE C:33 , ARG C:145 , ARG C:152 , HOH C:209BINDING SITE FOR RESIDUE FMT C 177
16BC7SOFTWARELYS B:160 , SER C:16 , ASP C:17 , ARG C:46BINDING SITE FOR RESIDUE FMT C 178
17BC8SOFTWAREGLY C:15 , SER C:43 , ALA C:44 , HIS C:45 , HOH C:193 , HOH C:407BINDING SITE FOR RESIDUE FMT C 179
18BC9SOFTWAREFMT A:176 , THR D:47 , PRO D:48 , GLU D:49 , ALA D:50BINDING SITE FOR RESIDUE FMT D 175
19CC1SOFTWAREGLY D:15 , SER D:43 , ALA D:44 , HIS D:45 , HOH D:202BINDING SITE FOR RESIDUE FMT D 176
20CC2SOFTWAREVAL A:41 , HOH A:323 , HOH D:329BINDING SITE FOR RESIDUE FMT D 177
21CC3SOFTWAREHIS A:45 , HOH A:210 , ALA D:82 , GLN D:150 , HOH D:243BINDING SITE FOR RESIDUE FMT D 178
22CC4SOFTWAREASP D:19 , GLY D:71BINDING SITE FOR RESIDUE FMT D 179
23CC5SOFTWAREGLU D:32 , ARG D:145BINDING SITE FOR RESIDUE FMT D 180
24CC6SOFTWAREGLY D:5 , HOH D:233 , HOH D:408BINDING SITE FOR RESIDUE FMT D 181

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3LP6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3LP6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3LP6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3LP6)

(-) Exons   (0, 0)

(no "Exon" information available for 3LP6)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:164
 aligned with PURE_MYCTO | P9WHM0 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:164
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165    
           PURE_MYCTO     6 ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAG 169
               SCOP domains d3lp6a_ A: automated matches                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhhh...eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lp6 A   6 ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAG 169
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165    


Chain A from PDB  Type:PROTEIN  Length:164
 aligned with PURE_MYCTU | P9WHM1 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:164
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165    
           PURE_MYCTU     6 ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAG 169
               SCOP domains d3lp6a_ A: automated matches                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhhh...eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lp6 A   6 ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAG 169
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165    


Chain B from PDB  Type:PROTEIN  Length:167
 aligned with PURE_MYCTO | P9WHM0 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:167
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       
           PURE_MYCTO     7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
               SCOP domains d3lp6b_ B: automated matches                                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh......eeeeeee...hhhhhhhhhh...eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lp6 B   7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       


Chain B from PDB  Type:PROTEIN  Length:167
 aligned with PURE_MYCTU | P9WHM1 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:167
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       
           PURE_MYCTU     7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
               SCOP domains d3lp6b_ B: automated matches                                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh......eeeeeee...hhhhhhhhhh...eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lp6 B   7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       


Chain C from PDB  Type:PROTEIN  Length:170
 aligned with PURE_MYCTO | P9WHM0 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:170
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173
           PURE_MYCTO     4 AGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
               SCOP domains d3lp6c_ C: automated matches                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhh....eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lp6 C   4 AGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173


Chain C from PDB  Type:PROTEIN  Length:170
 aligned with PURE_MYCTU | P9WHM1 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:170
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173
           PURE_MYCTU     4 AGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
               SCOP domains d3lp6c_ C: automated matches                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhh....eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lp6 C   4 AGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTR 173
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173


Chain D from PDB  Type:PROTEIN  Length:168
 aligned with PURE_MYCTO | P9WHM0 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:168
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160        
           PURE_MYCTO     1 MTPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLA 168
               SCOP domains d3lp6d_ D: automated matches                                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) -------AIRC-3lp6D01 D:8-157                                                                                                                                  ----------- Pfam domains (1)
           Pfam domains (2) -------AIRC-3lp6D02 D:8-157                                                                                                                                  ----------- Pfam domains (2)
           Pfam domains (3) -------AIRC-3lp6D03 D:8-157                                                                                                                                  ----------- Pfam domains (3)
           Pfam domains (4) -------AIRC-3lp6D04 D:8-157                                                                                                                                  ----------- Pfam domains (4)
         Sec.struct. author .........eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhh.....eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3lp6 D   1 MTPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLA 168
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160        


Chain D from PDB  Type:PROTEIN  Length:168
 aligned with PURE_MYCTU | P9WHM1 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:168
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160        
           PURE_MYCTU     1 MTPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLA 168
               SCOP domains d3lp6d_ D: automated matches                                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) -------AIRC-3lp6D01 D:8-157                                                                                                                                  ----------- Pfam domains (1)
           Pfam domains (2) -------AIRC-3lp6D02 D:8-157                                                                                                                                  ----------- Pfam domains (2)
           Pfam domains (3) -------AIRC-3lp6D03 D:8-157                                                                                                                                  ----------- Pfam domains (3)
           Pfam domains (4) -------AIRC-3lp6D04 D:8-157                                                                                                                                  ----------- Pfam domains (4)
         Sec.struct. author .........eeeee.hhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhh.....eeeeee...hhhhhhhhhhhhh.......ee....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3lp6 D   1 MTPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLA 168
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3LP6)

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: no clan defined [family: AIRC] (12)

(-) Gene Ontology  (5, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (PURE_MYCTU | P9WHM1)
molecular function
    GO:0034023    5-(carboxyamino)imidazole ribonucleotide mutase activity    Catalysis of the reaction: 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
biological process
    GO:0006189    'de novo' IMP biosynthetic process    The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
    GO:0040007    growth    The increase in size or mass of an entire organism, a part of an organism or a cell.
    GO:0006164    purine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

Chain A,B,C,D   (PURE_MYCTO | P9WHM0)
molecular function
    GO:0034023    5-(carboxyamino)imidazole ribonucleotide mutase activity    Catalysis of the reaction: 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
biological process
    GO:0006189    'de novo' IMP biosynthetic process    The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
    GO:0006164    purine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

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 Related Entries

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