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(-) Description

Title :  CRYSTAL STRUCTURE OF THE DIP2311 PROTEIN FROM CORYNEBACTERIUM DIPHTHERIAE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET CDR35
 
Authors :  F. Forouhar, S. Lew, J. Seetharaman, M. Mao, R. Xiao, C. Ciccosanti, W. A. Buchwald, M. Maglaqui, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (Nesg)
Date :  31 Jan 10  (Deposition) - 16 Feb 10  (Release) - 16 Feb 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Multi-Domained Alpha-Beta Protein, Structural Genomics, Psi- 2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, S. Lew, J. Seetharaman, M. Mao, R. Xiao, C. Ciccosanti, W. A. Buchwald, M. Maglaqui, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Northeast Structural Genomics Consortium Target Cdr35
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 469008
    Expression System Vector: PET 21-23C
    Gene: DIP2311
    Organism Scientific: CORYNEBACTERIUM DIPHTHERIAE
    Organism Taxid: 1717
    Strain: NCTC13129

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 40)

Asymmetric Unit (3, 40)
No.NameCountTypeFull Name
1CL6Ligand/IonCHLORIDE ION
2CO4Ligand/IonCOBALT (II) ION
3MSE30Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2CO-1Ligand/IonCOBALT (II) ION
3MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2CO-1Ligand/IonCOBALT (II) ION
3MSE9Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 6)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2CO-1Ligand/IonCOBALT (II) ION
3MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2CO-1Ligand/IonCOBALT (II) ION
3MSE9Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:41 , PHE A:42 , ASP A:90 , ASP A:154BINDING SITE FOR RESIDUE CO A 601
02AC2SOFTWAREMSE A:177 , TYR A:356 , PRO A:357 , ALA A:358BINDING SITE FOR RESIDUE CL A 584
03AC3SOFTWAREALA A:358BINDING SITE FOR RESIDUE CL A 585
04AC4SOFTWAREASN A:279 , ARG A:298BINDING SITE FOR RESIDUE CL A 586
05AC5SOFTWAREASP B:41 , PHE B:42 , ASP B:90 , ASP B:154BINDING SITE FOR RESIDUE CO B 601
06AC6SOFTWAREMSE B:177 , TYR B:356 , PRO B:357 , ALA B:358BINDING SITE FOR RESIDUE CL B 584
07AC7SOFTWAREASP C:41 , PHE C:42 , ASP C:90 , ASP C:154BINDING SITE FOR RESIDUE CO C 601
08AC8SOFTWAREASP C:175 , PRO C:176 , MSE C:177 , PRO C:357 , ALA C:358BINDING SITE FOR RESIDUE CL C 584
09AC9SOFTWAREASP D:41 , PHE D:42 , ASP D:90 , ASP D:154BINDING SITE FOR RESIDUE CO D 601
10BC1SOFTWAREASP D:175 , MSE D:177 , TYR D:356 , PRO D:357 , ALA D:358BINDING SITE FOR RESIDUE CL D 584

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:74 -A:156
2B:74 -B:156
3C:74 -C:156
4D:74 -D:156

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Gly A:398 -Pro A:399
2Val A:422 -Pro A:423
3Gly B:398 -Pro B:399
4Val B:422 -Pro B:423
5Gly C:398 -Pro C:399
6Val C:422 -Pro C:423
7Gly D:398 -Pro D:399
8Val D:422 -Pro D:423

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3LMM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3LMM)

(-) Exons   (0, 0)

(no "Exon" information available for 3LMM)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:492
 aligned with Q6NEG3_CORDI | Q6NEG3 from UniProtKB/TrEMBL  Length:575

    Alignment length:492
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498  
         Q6NEG3_CORDI     9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACMANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPMAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKNNTVVEGFVHKPVPEIPRLAVREAMLNAMIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRMYQAMIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVE 500
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh........hhhhh..eee.................hhhhhhhhhhhhhhhhhh...eeeee..............hhhhhhhhhhhhhh...eeeeee....eeeeeee..............eee....eee.hhhhhhhhhhhhh..hhhh.eeeee.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eeehhhhhhhh......eeeeee......eeeee......hhhhhhhhhhhhhhhhh..eeeee..eeeee...hhhhhhhhhhhhhhhh.......eeeeee....eeeeeee...................hhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eeeee...eeeeeee....hhhhhhhhhheehhhhh.hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhh.ee..ee.eeee..eeeehhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3lmm A   9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACmANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPmAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKNNTVVEGFVHKPVPEIPRLAVREAmLNAmIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRmYQAmIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVE 500
                                    18        28        38        48        58        68      | 78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298      |308|      318       328       338       348       358       368       378|   |  388       398       408       418       428       438       448       458       468       478       488       498  
                                                                                             75-MSE                                                                                               177-MSE                                                                                                                         305-MSE                                                                   379-MSE                                                                                                                     
                                                                                                                                                                                                                                                                                                                                      309-MSE                                                                   383-MSE                                                                                                                 


Chain B from PDB  Type:PROTEIN  Length:555
 aligned with Q6NEG3_CORDI | Q6NEG3 from UniProtKB/TrEMBL  Length:575

    Alignment length:566
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568      
         Q6NEG3_CORDI     9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACMANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPMAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKNNTVVEGFVHKPVPEIPRLAVREAMLNAMIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRMYQAMIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVEPSPFSPVRYLSTDQAELTNAAMLWLSEVGDLATSDLMAMCGVSRGTAKACVDGLVDEERVVAVGGGRSRRYRLV 574
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh........hhhhh..eee.....ee..ee......hhhhhhhhhhhhhhhhhh...eeeee..............hhhhhhhhhhhh.....eeeeee....eeeeeee..............eee....eee.hhhhhhhhhhhhh..hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhh......eeeeee......eeeee......hhhhhhhhhhhhhhhhh..-----------....hhhhhhhhhhhhhhhh.......eeeeee....eeeeeee...................hhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eeeee...eeeeeee....hhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhee..ee.eeee..eeeehhhhhhhhh...............hhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee.hhhhheeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lmm B   9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACmANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPmAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKN-----------VPEIPRLAVREAmLNAmIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRmYQAmIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVEPSPFSPVRYLSTDQAELTNAAmLWLSEVGDLATSDLmAmCGVSRGTAKACVDGLVDEERVVAVGGGRSRRYRLV 574
                                    18        28        38        48        58        68      | 78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278  |      -    |  298      |308|      318       328       338       348       358       368       378|   |  388       398       408       418       428       438       448       458       468       478       488       498       508       518   |   528       538|      548       558       568      
                                                                                             75-MSE                                                                                               177-MSE                                                                                                 281         293         305-MSE                                                                   379-MSE                                                                                                                                        522-MSE        537-MSE                                 
                                                                                                                                                                                                                                                                                                                                      309-MSE                                                                   383-MSE                                                                                                                                                     539-MSE                               


Chain C from PDB  Type:PROTEIN  Length:477
 aligned with Q6NEG3_CORDI | Q6NEG3 from UniProtKB/TrEMBL  Length:575

    Alignment length:488
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488        
         Q6NEG3_CORDI     9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACMANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPMAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKNNTVVEGFVHKPVPEIPRLAVREAMLNAMIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRMYQAMIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREIL 496
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh...............eee.....ee..ee......hhhhhhhhhhhhhhhhhh...eeeee..............hhhhhhhhhhhhhh...eeeeee....eeeeeee..............eee....eee.hhhhhhhhhhhhh..hhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeehhhhhhhh......eeeeee......eeeee......hhhhhhhhhhhhhhhhh..-----------....hhhhhhhhhhhhhhhh.......eeeeee....eeeeeee...................hhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eeeee...eeeeeee....hhhhhhhhhheehhhhh.hhhhhhhhhhhh...eehhhhhhhhhh.hhhhhhhhhhhhhh.ee..ee.eeee..eeeehhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lmm C   9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACmANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPmAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKN-----------VPEIPRLAVREAmLNAmIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRmYQAmIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREIL 496
                                    18        28        38        48        58        68      | 78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278  |      -    |  298      |308|      318       328       338       348       358       368       378|   |  388       398       408       418       428       438       448       458       468       478       488        
                                                                                             75-MSE                                                                                               177-MSE                                                                                                 281         293         305-MSE                                                                   379-MSE                                                                                                                 
                                                                                                                                                                                                                                                                                                                                      309-MSE                                                                   383-MSE                                                                                                             


Chain D from PDB  Type:PROTEIN  Length:556
 aligned with Q6NEG3_CORDI | Q6NEG3 from UniProtKB/TrEMBL  Length:575

    Alignment length:567
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       
         Q6NEG3_CORDI     9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACMANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPMAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKNNTVVEGFVHKPVPEIPRLAVREAMLNAMIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRMYQAMIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVEPSPFSPVRYLSTDQAELTNAAMLWLSEVGDLATSDLMAMCGVSRGTAKACVDGLVDEERVVAVGGGRSRRYRLVE 575
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------AAA_4-3lmmD01 D:36-160                                                                                                       ---------------------------------------------------------------------------------------------------------------------------------------------------------------HATPase_c_4-3lmmD05 D:320-405                                                         -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------AAA_4-3lmmD02 D:36-160                                                                                                       ---------------------------------------------------------------------------------------------------------------------------------------------------------------HATPase_c_4-3lmmD06 D:320-405                                                         -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ---------------------------AAA_4-3lmmD03 D:36-160                                                                                                       ---------------------------------------------------------------------------------------------------------------------------------------------------------------HATPase_c_4-3lmmD07 D:320-405                                                         -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ---------------------------AAA_4-3lmmD04 D:36-160                                                                                                       ---------------------------------------------------------------------------------------------------------------------------------------------------------------HATPase_c_4-3lmmD08 D:320-405                                                         -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
         Sec.struct. author hhhhhhhhhhhhhhhh................eee.....ee..ee......hhhhhhhhhhhhhhhhhh...eeeee..............hhhhhhhhhhhhhh...eeeeee....eeeeeee.........................hhhhhhhhhhhhh.......eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeehhhhhhhh......eeeeeeee..eeeeeee......hhhhhhhhhhhhhhhhh..-----------....hhhhhhhhhhhhhhhh.......eeeeee....eeeeeee...................hhhhhhhhhhh.....hhhhhhhhhhhhhhhh....eeeee...eeeeeee....hhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhee..ee.eeee..eeeehhhhhhhh................hhhhhhhhhhhhhhhh..eehhhhhhhh..hhhhhhhhhhhhhhh..eeee......eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lmm D   9 EGRREQLIAQVESILASAADGRVQKTKETQSVDFKEEAGRRNGPQIEPGKPENPEAADKLADEVACmANTPGGGALIVGIEDKTGRIIGTELDIDWLRQGIFTRIDVAPDVVAKRVLGQRVLAIYVAAAAEPIEDTSDRLRWRVGDSCRPVDRAEWWEYQRAQSGFDPmAQVTTATLGDARPAALALARKWDPAFAELTDEELLRGIGALDAEGFLSQAGKLLFTSLDRTAIELSIFDVHGGQVLNRVVPEPEKSCLEQLDYLEQALNVVNKN-----------VPEIPRLAVREAmLNAmIHRDWNRSEPIDVRWIELDSTLIVRSPGGFPAAITSENVLSNRAARYPALADLYRALGLVDKQGVGVDRmYQAmIALGHRPPTIEEIAGPFVETTLVGGRPVLPVLELVSSIVPEARQDDYRIAIVLYLLFQRPFITIDVVARGLQSGKEAARNALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVEPSPFSPVRYLSTDQAELTNAAmLWLSEVGDLATSDLmAmCGVSRGTAKACVDGLVDEERVVAVGGGRSRRYRLVE 575
                                    18        28        38        48        58        68      | 78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278  |      -    |  298      |308|      318       328       338       348       358       368       378|   |  388       398       408       418       428       438       448       458       468       478       488       498       508       518   |   528       538|      548       558       568       
                                                                                             75-MSE                                                                                               177-MSE                                                                                                 281         293         305-MSE                                                                   379-MSE                                                                                                                                        522-MSE        537-MSE                                  
                                                                                                                                                                                                                                                                                                                                      309-MSE                                                                   383-MSE                                                                                                                                                     539-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3LMM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3LMM)

(-) Pfam Domains  (2, 8)

Asymmetric Unit
(-)
Clan: P-loop_NTPase (1112)
(-)
Clan: no clan defined [family: HATPase_c_4] (1)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q6NEG3_CORDI | Q6NEG3)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

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Asymmetric Unit
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