3LE1 - JenaLib

Title :   CRYSTAL STRUCTURE OF APOHPR MONOMER FROM THERMOANAEROBACTER TENGCONGENSIS

Authors :   T. M. Fu, X. D. Su

Date :   14 Jan 10 (Deposition) - 15 Dec 10 (Release) - 15 Dec 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.51

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Hpr Pts Phosphotransfer, Kinase, Phosphotransferase System, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. M. Fu, X. D. Su
Dimerization Of Hpr By Reversible Domain Swapping.
To Be Published
PubMed: search

Compounds

Molecule 1 - PHOSPHOTRANSFERASE SYSTEM, HPR-RELATED PROTEINS
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	FRUB, TTE1820
	Organism Scientific	:	THERMOANAEROBACTER TENGCONGENSIS
	Organism Taxid	:	273068
	Strain	:	MB4T

Structural Features

Chains, Units

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (1, 6)

Asymmetric Unit (1, 6)

No.	Name	Count	Type	Full Name
1	CD	6	Ligand/Ion	CADMIUM ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION

Sites (6, 6)

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU A:71 , CD A:90 , HOH A:99 , HOH A:129 , LYS B:75	BINDING SITE FOR RESIDUE CD A 89
2	AC2	SOFTWARE	GLU A:71 , CD A:89 , HOH A:99 , GLU B:71 , HOH B:93	BINDING SITE FOR RESIDUE CD A 90
3	AC3	SOFTWARE	HOH A:107 , HOH A:108 , HOH A:110 , HOH A:115	BINDING SITE FOR RESIDUE CD A 92
4	AC4	SOFTWARE	HOH A:94 , HOH A:104 , HOH A:113 , HOH A:114	BINDING SITE FOR RESIDUE CD A 91
5	AC5	SOFTWARE	HOH B:98 , HOH B:106 , HOH B:113	BINDING SITE FOR RESIDUE CD B 89
6	AC6	SOFTWARE	HOH B:129	BINDING SITE FOR RESIDUE CD B 91

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:87
 aligned with Q8R910_CALS4 | Q8R910 from UniProtKB/TrEMBL  Length:88

    Alignment length:87
                                    10        20        30        40        50        60        70        80       
          Q8R910_CALS4    1 MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEEEAIKALVDLIESKFGE 87
               SCOP domains d3le1a_ A: automated matches                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......hhhhhhhhhhhhh....eeeeee..eeee..hhhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                  3le1 A  1 MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEEEAIKALVDLIESKFGE 87
                                    10        20        30        40        50        60        70        80

Chain B from PDB  Type:PROTEIN  Length:85
 aligned with Q8R910_CALS4 | Q8R910 from UniProtKB/TrEMBL  Length:88

    Alignment length:85
                                    10        20        30        40        50        60        70        80     
          Q8R910_CALS4    1 MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEEEAIKALVDLIESKF 85
               SCOP domains d3le1b_ B: automated matches                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......hhhhhhhhhhhhh....eeeeee..eeee...hhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                  3le1 B  1 MKEVTIEIKNKTGLHARPAALFVQTASKFSSQIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEEEAIKALVDLIESKF 85
                                    10        20        30        40        50        60        70        80

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	-	→ Gap	(green background, '-', border residues have a numbering label)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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Asymmetric Unit
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	Cis Peptide Bonds
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Biological Units
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		Biological Unit 2	[ Jena3D ]

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Description