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(-) Description

Title :  THE CRYSTAL STRUCTURE OF SMU.1108C FROM STREPTOCOCCUS MUTANS UA159
 
Authors :  X. -D. Su, M. J. Feng, X. Liu
Date :  29 Dec 09  (Deposition) - 08 Dec 10  (Release) - 08 Dec 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  X. -D. Su, M. J. Feng, X. Liu
The Crystal Structure Of Smu. 1108C From Streptococcus Mutan Ua159
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE UNCHARACTERIZED PROTEIN SMU.1108C
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28A
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    GeneSMU.1108C
    Organism ScientificSTREPTOCOCCUS MUTANS
    Organism Taxid210007
    StrainUA159

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1MG1Ligand/IonMAGNESIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:9 , ASP A:11 , ASP A:218 , HOH A:336 , HOH A:394 , HOH A:414 , HOH A:448BINDING SITE FOR RESIDUE MG A 271

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3L7Y)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ser A:141 -Pro A:142

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3L7Y)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3L7Y)

(-) Exons   (0, 0)

(no "Exon" information available for 3L7Y)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:266
 aligned with Q8DU45_STRMU | Q8DU45 from UniProtKB/TrEMBL  Length:270

    Alignment length:267
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       
         Q8DU45_STRMU     2 SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 268
               SCOP domains d3l7ya_ A: automated matches                                                                                                                                                                                                                                                SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----Hydrolase_3-3l7yA01 A:6-262                                                                                                                                                                                                                                      ------ Pfam domains
         Sec.struct. author ...eeee.............hhhhhhhhhhhhhhh..eeeee...hhhhhhh....hhhh.eeeehhh.eeee..eeeee...hhhhhhhhhhhhhhhh...eeeeee...eeee...hhhhhhhhh.....eeee.......-..eeeeeee.hhhhhhhhhhhhhh......eeeee....eeeeee...hhhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhh.eeee....hhhhhhhh.ee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3l7y A   2 SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLP-ERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 268
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141  | |  151       161       171       181       191       201       211       221       231       241       251       261       
                                                                                                                                                                        144 |                                                                                                                          
                                                                                                                                                                          146                                                                                                                          

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3L7Y)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: HAD (186)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q8DU45_STRMU | Q8DU45)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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