3KQ4 - JenaLib

Asymmetric Unit (72, 72)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:311 , VAL A:335 , SER A:336 , VAL A:337 , GLU A:349	BINDING SITE FOR RESIDUE NAG A 2001
02	AC2	SOFTWARE	ASN A:413 , PHE A:414 , THR A:415 , NAG A:2003	BINDING SITE FOR RESIDUE NAG A 2002
03	AC3	SOFTWARE	GLN A:321 , NAG A:2002 , BMA A:2004	BINDING SITE FOR RESIDUE NAG A 2003
04	AC4	SOFTWARE	NAG A:2003 , MAN A:2005 , MAN A:2006	BINDING SITE FOR RESIDUE BMA A 2004
05	AC5	SOFTWARE	BMA A:2004	BINDING SITE FOR RESIDUE MAN A 2005
06	AC6	SOFTWARE	BMA A:2004	BINDING SITE FOR RESIDUE MAN A 2006
07	AC7	SOFTWARE	GLY A:90 , HIS A:91 , SER A:130 , TYR A:133 , ASP A:171 , ASP A:222 , TYR A:224 , SER A:225 , LEU A:228 , GLN A:270 , THR A:364 , SER A:365 , TRP A:366 , GLY A:367 , VAL A:369 , VAL A:370 , TRP A:386 , PHE A:388 , LEU A:395 , ASN A:396 , GLU A:397 , GLY A:398 , TYR A:417	BINDING SITE FOR RESIDUE B12 A 2007
08	AC8	SOFTWARE	ASN B:984	BINDING SITE FOR RESIDUE NAG B 2001
09	AC9	SOFTWARE	PRO B:1065 , THR B:1091 , ASN B:1092 , NAG B:2003	BINDING SITE FOR RESIDUE NAG B 2002
10	BC1	SOFTWARE	NAG B:2002 , BMA B:2004 , MAN B:2006	BINDING SITE FOR RESIDUE NAG B 2003
11	BC2	SOFTWARE	NAG B:2003 , MAN B:2005 , MAN B:2006	BINDING SITE FOR RESIDUE BMA B 2004
12	BC3	SOFTWARE	BMA B:2004	BINDING SITE FOR RESIDUE MAN B 2005
13	BC4	SOFTWARE	NAG B:2003 , BMA B:2004	BINDING SITE FOR RESIDUE MAN B 2006
14	BC5	SOFTWARE	ASN B:1168	BINDING SITE FOR RESIDUE NAG B 2007
15	BC6	SOFTWARE	ASN B:1217	BINDING SITE FOR RESIDUE NAG B 2008
16	BC7	SOFTWARE	ASN B:1285 , THR B:1313	BINDING SITE FOR RESIDUE NAG B 2009
17	BC8	SOFTWARE	ASN B:1280 , ASN B:1307 , GLN B:1367 , LEU B:1369 , NAG B:2011	BINDING SITE FOR RESIDUE NAG B 2010
18	BC9	SOFTWARE	GLN B:1367 , NAG B:2010	BINDING SITE FOR RESIDUE NAG B 2011
19	CC1	SOFTWARE	ASN B:1319 , SER B:1360	BINDING SITE FOR RESIDUE NAG B 2012
20	CC2	SOFTWARE	ASN B:1332	BINDING SITE FOR RESIDUE NAG B 2013
21	CC3	SOFTWARE	GLU B:980 , ASP B:988 , ASP B:1027 , ASP B:1029 , LEU B:1030	BINDING SITE FOR RESIDUE CA B 2014
22	CC4	SOFTWARE	GLU B:1096 , ASP B:1105 , ASP B:1146 , ILE B:1148 , ASP B:1149	BINDING SITE FOR RESIDUE CA B 2015
23	CC5	SOFTWARE	GLU B:1213 , ASP B:1221 , ASP B:1262 , GLY B:1264 , GLN B:1265 , GLN B:1266	BINDING SITE FOR RESIDUE CA B 2016
24	CC6	SOFTWARE	GLU B:1328 , ASP B:1336 , ASP B:1373 , VAL B:1375	BINDING SITE FOR RESIDUE CA B 2017
25	CC7	SOFTWARE	ASN C:311 , VAL C:335 , SER C:336 , VAL C:337 , GLU C:349	BINDING SITE FOR RESIDUE NAG C 2001
26	CC8	SOFTWARE	ASN C:413 , PHE C:414 , THR C:415 , NAG C:2003	BINDING SITE FOR RESIDUE NAG C 2002
27	CC9	SOFTWARE	GLN C:321 , NAG C:2002 , BMA C:2004	BINDING SITE FOR RESIDUE NAG C 2003
28	DC1	SOFTWARE	NAG C:2003 , MAN C:2005 , MAN C:2006	BINDING SITE FOR RESIDUE BMA C 2004
29	DC2	SOFTWARE	BMA C:2004	BINDING SITE FOR RESIDUE MAN C 2005
30	DC3	SOFTWARE	BMA C:2004	BINDING SITE FOR RESIDUE MAN C 2006
31	DC4	SOFTWARE	GLY C:90 , HIS C:91 , SER C:130 , TYR C:133 , ASP C:171 , ASP C:222 , TYR C:224 , SER C:225 , LEU C:228 , GLN C:270 , THR C:364 , SER C:365 , TRP C:366 , GLY C:367 , VAL C:369 , VAL C:370 , TRP C:386 , PHE C:388 , LEU C:395 , ASN C:396 , GLU C:397 , GLY C:398 , TYR C:417	BINDING SITE FOR RESIDUE B12 C 2007
32	DC5	SOFTWARE	ASN D:984	BINDING SITE FOR RESIDUE NAG D 2001
33	DC6	SOFTWARE	PRO D:1065 , THR D:1091 , ASN D:1092 , NAG D:2003	BINDING SITE FOR RESIDUE NAG D 2002
34	DC7	SOFTWARE	NAG D:2002 , BMA D:2004 , MAN D:2006	BINDING SITE FOR RESIDUE NAG D 2003
35	DC8	SOFTWARE	NAG D:2003 , MAN D:2005 , MAN D:2006	BINDING SITE FOR RESIDUE BMA D 2004
36	DC9	SOFTWARE	BMA D:2004	BINDING SITE FOR RESIDUE MAN D 2005
37	EC1	SOFTWARE	NAG D:2003 , BMA D:2004	BINDING SITE FOR RESIDUE MAN D 2006
38	EC2	SOFTWARE	ASN D:1168	BINDING SITE FOR RESIDUE NAG D 2007
39	EC3	SOFTWARE	ASN D:1217	BINDING SITE FOR RESIDUE NAG D 2008
40	EC4	SOFTWARE	ASN D:1285 , THR D:1313	BINDING SITE FOR RESIDUE NAG D 2009
41	EC5	SOFTWARE	ASN D:1280 , ASN D:1307 , GLN D:1367 , LEU D:1369 , NAG D:2011	BINDING SITE FOR RESIDUE NAG D 2010
42	EC6	SOFTWARE	GLN D:1367 , NAG D:2010	BINDING SITE FOR RESIDUE NAG D 2011
43	EC7	SOFTWARE	ASN D:1319 , SER D:1360	BINDING SITE FOR RESIDUE NAG D 2012
44	EC8	SOFTWARE	ASN D:1332	BINDING SITE FOR RESIDUE NAG D 2013
45	EC9	SOFTWARE	GLU D:980 , ASP D:988 , ASP D:1027 , ASP D:1029 , LEU D:1030	BINDING SITE FOR RESIDUE CA D 2014
46	FC1	SOFTWARE	GLU D:1096 , ASP D:1105 , ASP D:1146 , ILE D:1148 , ASP D:1149	BINDING SITE FOR RESIDUE CA D 2015
47	FC2	SOFTWARE	GLU D:1213 , ASP D:1221 , ASP D:1262 , GLY D:1264 , GLN D:1265 , GLN D:1266	BINDING SITE FOR RESIDUE CA D 2016
48	FC3	SOFTWARE	GLU D:1328 , ASP D:1336 , ASP D:1373 , VAL D:1375	BINDING SITE FOR RESIDUE CA D 2017
49	FC4	SOFTWARE	ASN E:311 , VAL E:335 , SER E:336 , VAL E:337 , GLU E:349	BINDING SITE FOR RESIDUE NAG E 2001
50	FC5	SOFTWARE	GLN E:321 , ASN E:413 , PHE E:414 , THR E:415 , NAG E:2003	BINDING SITE FOR RESIDUE NAG E 2002
51	FC6	SOFTWARE	GLN E:321 , NAG E:2002 , BMA E:2004	BINDING SITE FOR RESIDUE NAG E 2003
52	FC7	SOFTWARE	NAG E:2003 , MAN E:2005 , MAN E:2006	BINDING SITE FOR RESIDUE BMA E 2004
53	FC8	SOFTWARE	BMA E:2004	BINDING SITE FOR RESIDUE MAN E 2005
54	FC9	SOFTWARE	BMA E:2004	BINDING SITE FOR RESIDUE MAN E 2006
55	GC1	SOFTWARE	GLY E:90 , HIS E:91 , SER E:130 , TYR E:133 , ASP E:171 , ASP E:222 , TYR E:224 , SER E:225 , LEU E:228 , GLN E:270 , THR E:364 , SER E:365 , TRP E:366 , GLY E:367 , VAL E:369 , VAL E:370 , TRP E:386 , PHE E:388 , LEU E:395 , ASN E:396 , GLU E:397 , GLY E:398 , TYR E:417	BINDING SITE FOR RESIDUE B12 E 2007
56	GC2	SOFTWARE	ASN F:984	BINDING SITE FOR RESIDUE NAG F 2001
57	GC3	SOFTWARE	PRO F:1065 , THR F:1091 , ASN F:1092 , NAG F:2003	BINDING SITE FOR RESIDUE NAG F 2002
58	GC4	SOFTWARE	NAG F:2002 , BMA F:2004 , MAN F:2006	BINDING SITE FOR RESIDUE NAG F 2003
59	GC5	SOFTWARE	NAG F:2003 , MAN F:2005 , MAN F:2006	BINDING SITE FOR RESIDUE BMA F 2004
60	GC6	SOFTWARE	BMA F:2004	BINDING SITE FOR RESIDUE MAN F 2005
61	GC7	SOFTWARE	NAG F:2003 , BMA F:2004	BINDING SITE FOR RESIDUE MAN F 2006
62	GC8	SOFTWARE	ASN F:1168	BINDING SITE FOR RESIDUE NAG F 2007
63	GC9	SOFTWARE	ASN F:1217	BINDING SITE FOR RESIDUE NAG F 2008
64	HC1	SOFTWARE	ASN F:1285 , THR F:1313	BINDING SITE FOR RESIDUE NAG F 2009
65	HC2	SOFTWARE	ASN F:1280 , ASN F:1307 , GLN F:1367 , LEU F:1369 , NAG F:2011	BINDING SITE FOR RESIDUE NAG F 2010
66	HC3	SOFTWARE	GLN F:1367 , NAG F:2010	BINDING SITE FOR RESIDUE NAG F 2011
67	HC4	SOFTWARE	ASN F:1319 , SER F:1360	BINDING SITE FOR RESIDUE NAG F 2012
68	HC5	SOFTWARE	ASN F:1332	BINDING SITE FOR RESIDUE NAG F 2013
69	HC6	SOFTWARE	GLU F:980 , ASP F:988 , ASP F:1027 , ASP F:1029 , LEU F:1030	BINDING SITE FOR RESIDUE CA F 2014
70	HC7	SOFTWARE	GLU F:1096 , ASP F:1105 , ASP F:1146 , ILE F:1148 , ASP F:1149	BINDING SITE FOR RESIDUE CA F 2015
71	HC8	SOFTWARE	GLU F:1213 , ASP F:1221 , ASP F:1262 , GLY F:1264 , GLN F:1265 , GLN F:1266	BINDING SITE FOR RESIDUE CA F 2016
72	HC9	SOFTWARE	GLU F:1328 , ASP F:1336 , ASP F:1373 , VAL F:1375	BINDING SITE FOR RESIDUE CA F 2017

SS Bonds (30, 30)

Cis Peptide Bonds (15, 15)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (6, 18)

PROSITE Motifs (2, 15)

Exons (9, 27)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:385
 aligned with IF_HUMAN | P27352 from UniProtKB/Swiss-Prot  Length:417

    Alignment length:393
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414   
            IF_HUMAN     25 SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGQLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY  417
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh............hhhhhhhhhh..........hhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhh.............--------....eeeeeeeee............eeee.....hhhhhhhhhhhhhhhh.eeeeee..eeeeeee..ee.hhhh.eeeeeee..ee..............eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------L------------------R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------COBALAMIN_BIND------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1----------------------------------------------------------Exon 1.3a  PDB: A:86-124               ----------------------------------------------Exon 1.4a  PDB: A:171-231 UniProt: 171-231                   Exon 1.5  PDB: A:232-291 UniProt: 232-291                   ------------------------------------------------------------------Exon 1.7a  PDB: A:358-398                ------------------- Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2  PDB: A:27-86 UniProt: 27-86                       -------------------------------------Exon 1.3c  PDB: A:124-171 UniProt: 124-171      -----------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: A:291-358 (gaps) UniProt: 291-358                   ---------------------------------------Exon 1.8b            Transcript 1 (2)
                3kq4 A   25 SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGHLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLP--------SASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY  417
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294    |    -   |   314       324       334       344       354       364       374       384       394       404       414   
                                                                                                                                                                                                                                                                                                            299      308

Chain B from PDB  Type:PROTEIN  Length:457
 aligned with CUBN_HUMAN | O60494 from UniProtKB/Swiss-Prot  Length:3623

    Alignment length:457
                                   941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381       
          CUBN_HUMAN    932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFV 1388
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...eee................eeeee....eeeee................eeeee......eeeee........ee....eeeeeee............eeeeee....eeeee......ee............eeeeee........eeeeeeee...........eeeee........eeeee........ee.....eeeeee........eeeeeee......ee.....eeeee............eeeeee.......eeeeeee............eeeeee......eeeeee........ee.....eeeeee..........eeeeee....eee.....eeee............eeeeeee.......eeeeeeee..........eeeeee..eeeeee........ee....eeeeeee.........eeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------V--------------------------------------------------------------H------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) CUB  PDB: B:932-1042 UniProt: 932-1042                                                                         -----CUB  PDB: B:1048-1161 UniProt: 1048-1161                                                                          ---CUB  PDB: B:1165-1277 UniProt: 1165-1277                                                                         CUB  PDB: B:1278-1388 UniProt: 1278-1389                                                                        PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3kq4 B  932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFV 1388
                                   941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381

Chain C from PDB  Type:PROTEIN  Length:385
 aligned with IF_HUMAN | P27352 from UniProtKB/Swiss-Prot  Length:417

    Alignment length:393
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414   
            IF_HUMAN     25 SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGQLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY  417
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh............hhhhhhhhhh..........hhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhh.............--------....eeeeeeeee............eeee.....hhhhhhhhhhhhhhhh.eeeeee..eeeeeee..ee.hhhh.eeeeeee..ee..............eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------L------------------R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------COBALAMIN_BIND------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1----------------------------------------------------------Exon 1.3a  PDB: C:86-124               ----------------------------------------------Exon 1.4a  PDB: C:171-231 UniProt: 171-231                   Exon 1.5  PDB: C:232-291 UniProt: 232-291                   ------------------------------------------------------------------Exon 1.7a  PDB: C:358-398                ------------------- Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2  PDB: C:27-86 UniProt: 27-86                       -------------------------------------Exon 1.3c  PDB: C:124-171 UniProt: 124-171      -----------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: C:291-358 (gaps) UniProt: 291-358                   ---------------------------------------Exon 1.8b            Transcript 1 (2)
                3kq4 C   25 SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGHLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLP--------SASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY  417
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294    |    -   |   314       324       334       344       354       364       374       384       394       404       414   
                                                                                                                                                                                                                                                                                                            299      308

Chain D from PDB  Type:PROTEIN  Length:457
 aligned with CUBN_HUMAN | O60494 from UniProtKB/Swiss-Prot  Length:3623

    Alignment length:457
                                   941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381       
          CUBN_HUMAN    932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFV 1388
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...eee................eeeee....eeeee................eeeee......eeeee........ee....eeeeeee............eeeeee....eeeee......ee............eeeeee........eeeeeeee...........eeeee........eeeee........ee.....eeeeee........eeeeeee......ee.....eeeee............eeeeee.......eeeeeee............eeeeee......eeeeee........ee.....eeeeee..........eeeeee....eee.....eeee............eeeeeee.......eeeeeeee..........eeeeee..eeeeee........ee....eeeeeee.........eeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------V--------------------------------------------------------------H------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) CUB  PDB: D:932-1042 UniProt: 932-1042                                                                         -----CUB  PDB: D:1048-1161 UniProt: 1048-1161                                                                          ---CUB  PDB: D:1165-1277 UniProt: 1165-1277                                                                         CUB  PDB: D:1278-1388 UniProt: 1278-1389                                                                        PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3kq4 D  932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFV 1388
                                   941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381

Chain E from PDB  Type:PROTEIN  Length:385
 aligned with IF_HUMAN | P27352 from UniProtKB/Swiss-Prot  Length:417

    Alignment length:393
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414   
            IF_HUMAN     25 SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGQLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY  417
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Cobalamin_bind-3kq4E01 E:25-313                                                                                                                                                                                                                                                                  -------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) Cobalamin_bind-3kq4E02 E:25-313                                                                                                                                                                                                                                                                  -------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) Cobalamin_bind-3kq4E03 E:25-313                                                                                                                                                                                                                                                                  -------------------------------------------------------------------------------------------------------- Pfam domains (3)
         Sec.struct. author .......hhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh............hhhhhhhhhh..........hhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhh.............--------....eeeeeeeee............eeee.....hhhhhhhhhhhhhhhh.eeeeee..eeeeeee..ee.hhhh.eeeeeee..ee..............eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------L------------------R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------COBALAMIN_BIND------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1----------------------------------------------------------Exon 1.3a  PDB: E:86-124               ----------------------------------------------Exon 1.4a  PDB: E:171-231 UniProt: 171-231                   Exon 1.5  PDB: E:232-291 UniProt: 232-291                   ------------------------------------------------------------------Exon 1.7a  PDB: E:358-398                ------------------- Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2  PDB: E:27-86 UniProt: 27-86                       -------------------------------------Exon 1.3c  PDB: E:124-171 UniProt: 124-171      -----------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: E:291-358 (gaps) UniProt: 291-358                   ---------------------------------------Exon 1.8b            Transcript 1 (2)
                3kq4 E   25 SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGHLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLP--------SASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY  417
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294    |    -   |   314       324       334       344       354       364       374       384       394       404       414   
                                                                                                                                                                                                                                                                                                            299      308

Chain F from PDB  Type:PROTEIN  Length:457
 aligned with CUBN_HUMAN | O60494 from UniProtKB/Swiss-Prot  Length:3623

    Alignment length:457
                                   941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381       
          CUBN_HUMAN    932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFV 1388
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F01 F:1278-1386                                                                                      -- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F02 F:1278-1386                                                                                      -- Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F03 F:1278-1386                                                                                      -- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F04 F:1278-1386                                                                                      -- Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F05 F:1278-1386                                                                                      -- Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F06 F:1278-1386                                                                                      -- Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F07 F:1278-1386                                                                                      -- Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F08 F:1278-1386                                                                                      -- Pfam domains (8)
           Pfam domains (9) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F09 F:1278-1386                                                                                      -- Pfam domains (9)
          Pfam domains (10) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F10 F:1278-1386                                                                                      -- Pfam domains (10)
          Pfam domains (11) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F11 F:1278-1386                                                                                      -- Pfam domains (11)
          Pfam domains (12) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUB-3kq4F12 F:1278-1386                                                                                      -- Pfam domains (12)
         Sec.struct. author ...ee...eee................eeeee....eeeee................eeeee......eeeee........ee....eeeeeee............eeeeee....eeeee......ee............eeeeee........eeeeeeee...........eeeee........eeeee........ee.....eeeeee........eeeeeee......ee.....eeeee............eeeeee.......eeeeeee............eeeeee......eeeeee........ee.....eeeeee..........eeeeee....eee.....eeee............eeeeeee.......eeeeeeee..........eeeeee..eeeeee........ee....eeeeeee.........eeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------V--------------------------------------------------------------H------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) CUB  PDB: F:932-1042 UniProt: 932-1042                                                                         -----CUB  PDB: F:1048-1161 UniProt: 1048-1161                                                                          ---CUB  PDB: F:1165-1277 UniProt: 1165-1277                                                                         CUB  PDB: F:1278-1388 UniProt: 1278-1389                                                                        PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3kq4 F  932 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFV 1388
                                   941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (2, 15)

Gene Ontology (44, 51)

Asymmetric Unit(hide GO term definitions)

Chain A,C,E (IF_HUMAN | P27352)

molecular function
	GO:0031419	cobalamin binding	Interacting selectively and non-covalently with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
biological process
	GO:0009235	cobalamin metabolic process	The chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
	GO:0015889	cobalamin transport	The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006824	cobalt ion transport	The directed movement of cobalt (Co) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006811	ion transport	The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0016324	apical plasma membrane	The region of the plasma membrane located at the apical end of the cell.
	GO:0005768	endosome	A vacuole to which materials ingested by endocytosis are delivered.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0043202	lysosomal lumen	The volume enclosed within the lysosomal membrane.
	GO:0005902	microvillus	Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.

Chain B,D,F (CUBN_HUMAN | O60494)

molecular function
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0031419	cobalamin binding	Interacting selectively and non-covalently with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
	GO:0004872	receptor activity	Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
	GO:0005215	transporter activity	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
biological process
	GO:0008203	cholesterol metabolic process	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues.
	GO:0009235	cobalamin metabolic process	The chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
	GO:0015889	cobalamin transport	The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006897	endocytosis	A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0042157	lipoprotein metabolic process	The chemical reactions and pathways involving any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.
	GO:0042953	lipoprotein transport	The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0015031	protein transport	The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006898	receptor-mediated endocytosis	An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles.
	GO:0008202	steroid metabolic process	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.
	GO:0001894	tissue homeostasis	A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
	GO:0042359	vitamin D metabolic process	The chemical reactions and pathways involving vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0045177	apical part of cell	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.
	GO:0016324	apical plasma membrane	The region of the plasma membrane located at the apical end of the cell.
	GO:0005903	brush border	The dense covering of microvilli on the apical surface of a epithelial cells in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell.
	GO:0031526	brush border membrane	The portion of the plasma membrane surrounding the brush border.
	GO:0005905	clathrin-coated pit	A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0030139	endocytic vesicle	A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0005768	endosome	A vacuole to which materials ingested by endocytosis are delivered.
	GO:0010008	endosome membrane	The lipid bilayer surrounding an endosome.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0031232	extrinsic component of external side of plasma membrane	The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.
	GO:0043202	lysosomal lumen	The volume enclosed within the lysosomal membrane.
	GO:0005765	lysosomal membrane	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
	GO:0005764	lysosome	A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 72)

Sites (72, 72)

SS Bonds (30, 30)

Cis Peptide Bonds (15, 15)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (6, 18)

PROSITE Motifs (2, 15)

Exons (9, 27)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (2, 15)

Gene Ontology (44, 51)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File