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(-) Description

Title :  CAMKIINTIDE INHIBITOR COMPLEX
 
Authors :  J. Kuriyan, L. H. Chao, P. Pellicena, S. Deindl, L. A. Barclay, H. Schulm
Date :  06 Nov 09  (Deposition) - 09 Feb 10  (Release) - 26 May 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.37
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J
Biol. Unit 1:  A (1x),D (1x)
Biol. Unit 2:  B (1x),I (1x)
Biol. Unit 3:  C,H  (1x)
Biol. Unit 4:  E (1x),J (1x)
Biol. Unit 5:  F,G  (1x)
Biol. Unit 6:  B  (1x)
Biol. Unit 7:  D  (1x)
Biol. Unit 8:  J  (1x)
Keywords :  Camkii, Camkiintide, Atp-Binding, Kinase, Nucleotide-Binding, Serine/Threonine-Protein Kinase, Cell Junction, Cell Membrane, Membrane, Postsynaptic Cell Membrane, Protein Kinase Inhibitor, Synapse, Synaptosome, Transferase- Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. H. Chao, P. Pellicena, S. Deindl, L. A. Barclay, H. Schulman, J. Kuriyan
Intersubunit Capture Of Regulatory Segments Is A Component Of Cooperative Camkii Activation.
Nat. Struct. Mol. Biol. V. 17 264 2010
PubMed-ID: 20139983  |  Reference-DOI: 10.1038/NSMB.1751

(-) Compounds

Molecule 1 - CALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE II
    ChainsA, C, E, G, I
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneUNC-43, K11E8.1, K11E8.1D
    MutationYES
    Organism CommonNEMATODE
    Organism ScientificCAENORHABDITIS ELEGANS
    Organism Taxid6239
 
Molecule 2 - CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE II INHIBITOR 1
    ChainsB, D, F, H, J
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneCAMK2N1
    Organism CommonRAT
    Organism ScientificRATTUS NORVEGICUS
    Organism Taxid10116
    SynonymCALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE II INHIBITOR ALPHA, CAM-KIINALPHA, CAMKIINALPHA

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric Unit ABCDEFGHIJ
Biological Unit 1 (1x)A (1x)  D (1x)      
Biological Unit 2 (1x) B (1x)      I (1x) 
Biological Unit 3 (1x)  C    H  
Biological Unit 4 (1x)    E (1x)    J (1x)
Biological Unit 5 (1x)     FG   
Biological Unit 6 (1x) B        
Biological Unit 7 (1x)   D      
Biological Unit 8 (1x)         J

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3KL8)

(-) Sites  (0, 0)

(no "Site" information available for 3KL8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3KL8)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Thr A:46 -Lys A:47
2Lys A:48 -Leu A:49
3Ser A:233 -Pro A:234
4Ser C:233 -Pro C:234
5Ser E:233 -Pro E:234
6Lys F:281 -Arg F:282
7Ser G:233 -Pro G:234
8Ser I:233 -Pro I:234

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3KL8)

(-) PROSITE Motifs  (2, 10)

Asymmetric Unit (2, 10)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  5A:27-42
C:19-42
E:25-42
G:25-42
I:20-42
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  5A:131-143
C:131-143
E:131-143
G:131-143
I:131-143
Biological Unit 1 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  1A:27-42
-
-
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  1A:131-143
-
-
-
-
Biological Unit 2 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  1-
-
-
-
I:20-42
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  1-
-
-
-
I:131-143
Biological Unit 3 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  1-
C:19-42
-
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  1-
C:131-143
-
-
-
Biological Unit 4 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  1-
-
E:25-42
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  1-
-
E:131-143
-
-
Biological Unit 5 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  1-
-
-
G:25-42
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  1-
-
-
G:131-143
-
Biological Unit 6 (, 0)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  0-
-
-
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  0-
-
-
-
-
Biological Unit 7 (, 0)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  0-
-
-
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  0-
-
-
-
-
Biological Unit 8 (, 0)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.KCC2D_CAEEL18-41
 
 
 
 
  0-
-
-
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.KCC2D_CAEEL130-142
 
 
 
 
  0-
-
-
-
-

(-) Exons   (0, 0)

(no "Exon" information available for 3KL8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:256
 aligned with KCC2D_CAEEL | O62305 from UniProtKB/Swiss-Prot  Length:720

    Alignment length:264
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269    
          KCC2D_CAEEL    10 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 273
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee...--------.eeee......eeeeeee.....hhhhhhhhhhhhhhhh.........eeeeee....eeeee......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee........eee......ee.................hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh....hhhhh.hhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------PROTEIN_KINASE_ATP      ----------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3kl8 A  11 DNYDVKEE--------VRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 274
                                   | -      | 30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    
                                  18       27                                                                                                                                                                                                                                                       

Chain B from PDB  Type:PROTEIN  Length:18
 aligned with CK2N1_RAT | Q9JI15 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:18
                                    51        
            CK2N1_RAT    42 KRPPKLGQIGRSKRVVIE  59
               SCOP domains ------------------ SCOP domains
               CATH domains ------------------ CATH domains
               Pfam domains ------------------ Pfam domains
         Sec.struct. author ....hhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------ SAPs(SNPs)
                    PROSITE ------------------ PROSITE
                 Transcript ------------------ Transcript
                 3kl8 B 281 KRPPKLGQIGRSKRVVIA 298
                                   290        

Chain C from PDB  Type:PROTEIN  Length:256
 aligned with KCC2D_CAEEL | O62305 from UniProtKB/Swiss-Prot  Length:720

    Alignment length:267
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       
          KCC2D_CAEEL     7 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 273
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee.-----.eeeeee......eeeeeee..------hhhhhhhhhhhhhhh.......eeeeee....eeeee......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee........eee......ee.........ee......hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh....hhhhh.hhhhhh......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------PROTEIN_KINASE_ATP      ----------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kl8 C   8 KFSDNYDVKEEL-----SVVRRCVHKTTGLEFAAKIINT------DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 274
                                    17 |     |27        37        |-     |  57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       
                                      19    25                   46     53                                                                                                                                                                                                                             

Chain D from PDB  Type:PROTEIN  Length:16
 aligned with CK2N1_RAT | Q9JI15 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:16
                                    51      
            CK2N1_RAT    42 KRPPKLGQIGRSKRVV  57
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author ....hhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                 3kl8 D 281 KRPPKLGQIGRSKRVV 296
                                   290      

Chain E from PDB  Type:PROTEIN  Length:256
 aligned with KCC2D_CAEEL | O62305 from UniProtKB/Swiss-Prot  Length:720

    Alignment length:267
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       
          KCC2D_CAEEL     7 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 273
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee...------.eeeeee......eeeeeee.-----..hhhhhhhhhhhhh.........eeeeee....eeeee......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee........eee......ee.................hhhhhh......hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh....hhhhh.hhhhhh......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------PROTEIN_KINASE_ATP      ----------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kl8 E   8 KFSDNYDVKEE------SVVRRCVHKTTGLEFAAKIIN-----ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 274
                                    17|      |27        37       | -   |    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       
                                     18     25                  45    51                                                                                                                                                                                                                               

Chain F from PDB  Type:PROTEIN  Length:17
 aligned with CK2N1_RAT | Q9JI15 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:17
                                    51       
            CK2N1_RAT    42 KRPPKLGQIGRSKRVVI  58
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ....hhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
                 Transcript ----------------- Transcript
                 3kl8 F 281 KRPPKLGQIGRSKRVVI 297
                                   290       

Chain G from PDB  Type:PROTEIN  Length:259
 aligned with KCC2D_CAEEL | O62305 from UniProtKB/Swiss-Prot  Length:720

    Alignment length:269
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264         
          KCC2D_CAEEL     5 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 273
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .-......ee...------.eeeeee......eeeeeee..---...hhhhhhhhhhhhhhh.......eeeeee....eeeee......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee........eee......ee.................hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh....hhhhh.hhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------PROTEIN_KINASE_ATP      ----------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kl8 G   6 T-KFSDNYDVKEE------SVVRRCVHKTTGLEFAAKIINT---SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 274
                            | |     15  |     25        35        45|   |   55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265         
                            6 8        18     25                   46  50                                                                                                                                                                                                                                

Chain H from PDB  Type:PROTEIN  Length:17
 aligned with CK2N1_RAT | Q9JI15 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:17
                                    51       
            CK2N1_RAT    42 KRPPKLGQIGRSKRVVI  58
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ....hhhhhh.....ee Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
                 Transcript ----------------- Transcript
                 3kl8 H 281 KRPPKLGQIGRSKRVVI 297
                                   290       

Chain I from PDB  Type:PROTEIN  Length:254
 aligned with KCC2D_CAEEL | O62305 from UniProtKB/Swiss-Prot  Length:720

    Alignment length:267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       
          KCC2D_CAEEL     5 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 271
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) - -----Pkina  se-  3kl8I01 I:13-270                                                                                                                                                                                                                                      -- Pfam domains (1)
           Pfam domains (2) - -----Pkina  se-  3kl8I02 I:13-270                                                                                                                                                                                                                                      -- Pfam domains (2)
           Pfam domains (3) - -----Pkina  se-  3kl8I03 I:13-270                                                                                                                                                                                                                                      -- Pfam domains (3)
           Pfam domains (4) - -----Pkina  se-  3kl8I04 I:13-270                                                                                                                                                                                                                                      -- Pfam domains (4)
           Pfam domains (5) - -----Pkina  se-  3kl8I05 I:13-270                                                                                                                                                                                                                                      -- Pfam domains (5)
         Sec.struct. author .-..........--...--.eeeeee......eeeeeee..--------hhhhhhhhhhh.........eeeeee....eeeee......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee........eee......ee.................hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh..hhhhh.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------PROTEIN_KINASE_ATP      ----------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kl8 I   6 T-KFSDNYDVKE--GKG--SVVRRCVHKTTGLEFAAKIINT--------QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 272
                            | |     15 |  | | 25        35        45|       55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       
                            6 8       17 20 | 25                   46       55                                                                                                                                                                                                                         
                                           22                                                                                                                                                                                                                                                          

Chain J from PDB  Type:PROTEIN  Length:17
 aligned with CK2N1_RAT | Q9JI15 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:17
                                    52       
            CK2N1_RAT    43 RPPKLGQIGRSKRVVIE  59
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ...hhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
                 Transcript ----------------- Transcript
                 3kl8 J 282 RPPKLGQIGRSKRVVIA 298
                                   291       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3KL8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3KL8)

(-) Pfam Domains  (1, 5)

Asymmetric Unit
(-)
Clan: PKinase (934)

(-) Gene Ontology  (37, 38)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G,I   (KCC2D_CAEEL | O62305)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0005516    calmodulin binding    Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
    GO:0004683    calmodulin-dependent protein kinase activity    Catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate. These reactions require the presence of calcium-bound calmodulin.
    GO:0044325    ion channel binding    Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0000165    MAPK cascade    An intracellular protein kinase cascade containing at least a MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
    GO:0072375    medium-term memory    The memory process that deals with the storage, retrieval and modification of information received at a time ago that is intermediate between that of short and long term memory (30min - 7hrs in Drosophila melanogaster).
    GO:0018105    peptidyl-serine phosphorylation    The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.
    GO:0018107    peptidyl-threonine phosphorylation    The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0010628    positive regulation of gene expression    Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
cellular component
    GO:0030424    axon    The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
    GO:1904115    axon cytoplasm    Any cytoplasm that is part of a axon.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043204    perikaryon    The portion of the cell soma (neuronal cell body) that excludes the nucleus.

Chain B,D,F,H,J   (CK2N1_RAT | Q9JI15)
molecular function
    GO:0008427    calcium-dependent protein kinase inhibitor activity    Stops, prevents or reduces the activity of a calcium-dependent protein kinase.
    GO:0019901    protein kinase binding    Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
    GO:0004860    protein kinase inhibitor activity    Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein.
biological process
    GO:0007268    chemical synaptic transmission    The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.
    GO:1904030    negative regulation of cyclin-dependent protein kinase activity    Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.
cellular component
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0030425    dendrite    A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0014069    postsynaptic density of dendrite    An electron dense network of proteins within and adjacent to the postsynaptic membrane of the dendrite of asymetric synapses. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
    GO:0045211    postsynaptic membrane    A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.
    GO:0045202    synapse    The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KCC2D_CAEEL | O623052bdw 2f86 3kk8 3kk9

(-) Related Entries Specified in the PDB File

3kk8 3kk9