Chain A from PDB Type:PROTEIN Length:113
aligned with HIUH_DANRE | Q06S87 from UniProtKB/Swiss-Prot Length:138
Alignment length:113
35 45 55 65 75 85 95 105 115 125 135
HIUH_DANRE 26 SPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTYRGS 138
SCOP domains d3iwva_ A: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee..eee....ee....eeeeeee......eeeeeeee..................eeeeeeehhhhhhhhh........eeeeeee......ee..eeee..eeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----TRANSTHYRETIN_1 -------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
3iwv A 7 SPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTTRGS 119
16 26 36 46 56 66 76 86 96 106 116
Chain B from PDB Type:PROTEIN Length:117
aligned with HIUH_DANRE | Q06S87 from UniProtKB/Swiss-Prot Length:138
Alignment length:117
31 41 51 61 71 81 91 101 111 121 131
HIUH_DANRE 22 ATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTYRGS 138
SCOP domains d3iwvb_ B: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......ee..eee....ee....eeeeeee......eeeeeeee..................eeeeeeehhhhhhhh.........eeeeeee......ee..eee...eeeee... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------TRANSTHYRETIN_1 -------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3iwv B 3 ATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTTRGS 119
12 22 32 42 52 62 72 82 92 102 112
Chain C from PDB Type:PROTEIN Length:117
aligned with HIUH_DANRE | Q06S87 from UniProtKB/Swiss-Prot Length:138
Alignment length:117
31 41 51 61 71 81 91 101 111 121 131
HIUH_DANRE 22 ATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTYRGS 138
SCOP domains d3iwvc_ C: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......ee..eee....ee....eeeeeeee....eeeeeeeee..................eeeeeeehhhhhhhhh........eeeeeee......ee..eeee..eeeee... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------TRANSTHYRETIN_1 -------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3iwv C 3 ATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTTRGS 119
12 22 32 42 52 62 72 82 92 102 112
Chain D from PDB Type:PROTEIN Length:114
aligned with HIUH_DANRE | Q06S87 from UniProtKB/Swiss-Prot Length:138
Alignment length:114
34 44 54 64 74 84 94 104 114 124 134
HIUH_DANRE 25 LSPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTYRGS 138
SCOP domains d3iwvd_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...ee..eee....ee....eeeeeee......eeeeeeee..................eeeeeeehhhhhhhhh........eeeeeee......ee..eee...eeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TRANSTHYRETIN_1 -------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
3iwv D 6 LSPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTTRGS 119
15 25 35 45 55 65 75 85 95 105 115
Legend: |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |