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(-) Description

Title :  STRUCTURE OF PUTATIVE 3-OXOACYL-REDUCTASE FROM BACILLUS THURINGIENSIS
 
Authors :  U. A. Ramagopal, J. Kim, R. Toro, S. K. Burley, S. C. Almo, New York Sgx Center For Structural Genomics (Nysgxrc)
Date :  01 Jul 09  (Deposition) - 28 Jul 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.39
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Structural Genomics, 3-Oxoacyl-Reductase, Psi-2, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. A. Ramagopal, J. Kim, R. Toro, S. K. Burley, S. C. Almo
Structure Of Putative 3-Oxoacyl-Reductase From Bacillus Thuringiensis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - 3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BC-PSGX4(BC)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: SEQUENCE DATABASE RESIDUES 37-287
    Gene: BTHUR0006_42590
    Organism Scientific: BACILLUS THURINGIENSIS SEROVAR KURSTAKI
    Organism Taxid: 527023
    Strain: T03A001

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3I4F)

(-) Sites  (0, 0)

(no "Site" information available for 3I4F)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3I4F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3I4F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3I4F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3I4F)

(-) Exons   (0, 0)

(no "Exon" information available for 3I4F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains d3i4fa_ A: automated matches                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee....hhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee...hhhhhh.hhhhhhhh...hhhhhhhhhhhhhhhhhh.....eeee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i4f A  37 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIH 286
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236   ||  254       264       274       284  
                                                                                                                                                                                                                                     240|                                     
                                                                                                                                                                                                                                      249                                     


Chain B from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains d3i4fb_ B: automated matches                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee....hhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee...hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.....eeee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i4f B  37 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIH 286
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236   ||  254       264       274       284  
                                                                                                                                                                                                                                     240|                                     
                                                                                                                                                                                                                                      249                                     


Chain C from PDB  Type:PROTEIN  Length:240
                                                                                                                                                                                                                                                                                
               SCOP domains d3i4fc_ C: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee....hhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee...hhhhhh.hhhhhhhh...hhhhhhhhhhhhhh.........eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3i4f C  37 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIH 286
                                    46        56        66   ||   78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238 ||    256       266       276       286
                                                            70|                                                                                                                                                                    240|                                     
                                                             73                                                                                                                                                                     249                                     


Chain D from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains d3i4fd_ D: automated matches                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee....hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhhhhhh...eeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee...hhhhhh.hhhhhhhh.....hhhhhhhhhhhhhhhhhh.....eeee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i4f D  37 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIH 286
                                    46        56        66   ||   78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238 ||    254       264       274       284  
                                                            70|                                                                                                                                                                    240|                                       
                                                             73                                                                                                                                                                     247
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3I4F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3I4F)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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