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(-) Description

Title :  CRYSTAL STRUCTURE OF RBCX FROM ANABAENA, CRYSTAL FORM II
 
Authors :  A. Bracher, C. Liu
Date :  22 Jun 09  (Deposition) - 19 Jan 10  (Release) - 21 Mar 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Rubisco, Protein Complex Assembly, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Liu, A. L. Young, A. Starling-Windhof, A. Bracher, S. Saschenbrecker, B. V. Rao, K. V. Rao, O. Berninghausen, T. Mielke, F. U. Hartl, R. Beckmann, M. Hayer-Hartl
Coupled Chaperone Action In Folding And Assembly Of Hexadecameric Rubisco.
Nature V. 463 197 2010
PubMed-ID: 20075914  |  Reference-DOI: 10.1038/NATURE08651

(-) Compounds

Molecule 1 - RBCX PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: RBCX
    Organism Scientific: ANABAENA SP.
    Organism Taxid: 1167

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:-1 , GLY A:-2 , HIS A:0 , MET A:1 , HOH A:164 , SER B:-1 , GLY B:-2 , HIS B:0 , MET B:1 , HOH B:146BINDING SITE FOR RESIDUE SO4 B 136

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HYB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3HYB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HYB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3HYB)

(-) Exons   (0, 0)

(no "Exon" information available for 3HYB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:115
 aligned with Q44212_9NOST | Q44212 from UniProtKB/TrEMBL  Length:135

    Alignment length:115
                                      1                                                                                                        
                                     -|       10        20        30        40        50        60        70        80        90       100     
         Q44212_9NOST     - ----------MNLKQIAKDTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSAGKVQDGEKYIEELFLEKPDLALRIMTVREHIAEEIAEFLPEMVVTGIQQANMEKRRQHL 105
               SCOP domains d3hyba_ A: RuBisCo chaperone RbcX                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyb A  -9 SSGLVPRGSHMNLKQIAKDTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSAGKVQDGEKYIEELFLEKPDLALRIMTVREHIAEEIAEFLPEMVVTGIQQANMEKRRQHL 105
                                     0        10        20        30        40        50        60        70        80        90       100     


Chain B from PDB  Type:PROTEIN  Length:115
 aligned with Q44212_9NOST | Q44212 from UniProtKB/TrEMBL  Length:135

    Alignment length:115
                                      1                                                                                                        
                                     -|       10        20        30        40        50        60        70        80        90       100     
         Q44212_9NOST     - ----------MNLKQIAKDTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSAGKVQDGEKYIEELFLEKPDLALRIMTVREHIAEEIAEFLPEMVVTGIQQANMEKRRQHL 105
               SCOP domains d3hybb_ B: RuBisCo chaperone RbcX                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                 3hyb B  -9 SSGLVPRGSHMNLKQIAKDTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSAGKVQDGEKYIEELFLEKPDLALRIMTVREHIAEEIAEFLPEMVVTGIQQANMEKRRQHL 105
                                     0        10        20        30        40        50        60        70        80        90       100
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3HYB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HYB)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3HYB)

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  3hyb
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q44212_9NOST | Q44212: 2peo 2wvw 3rg6

(-) Related Entries Specified in the PDB File

2peo CRYSTAL STRUCTURE OF RBCX FROM ANABAENA CA