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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE BRANCHED-CHAIN AMINO ACID ABC TRANSPORTER FROM RHODOSPIRILLUM RUBRUM
 
Authors :  L. Satyanarayana, S. K. Burley, S. Swaminathan, New York Sgx Research Center For Structural Genomics (Nysgxrc)
Date :  15 Jun 09  (Deposition) - 30 Jun 09  (Release) - 30 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.93
Chains :  Asym./Biol. Unit :  A
Keywords :  Extracellular Ligand-Binding Receptor, Transport Protein, Receptor Or Singnal Protein, 11236M, Psi-2, New York Sgx Research Center For Structural Genomics, Nysgxrc, , Protein Structure Initiative, Receptor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Satyanarayana, S. K. Burley, S. Swaminathan
Crystal Structure Of A Putative Branched-Chain Amino Acid Abc Transporter From Rhodospirillum Rubrum
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE BRANCHED-CHAIN AMINO ACID ABC TRANSPORTER
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: BC-PSGX3
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 40-386
    Gene: RRU_A2873
    Organism Scientific: RHODOSPIRILLUM RUBRUM ATCC 11170
    Organism Taxid: 269796
    Strain: ATCC 11170 OR NCIB 8255
    Synonym: EXTRACELLULAR LIGAND-BINDING RECEPTOR

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric/Biological Unit (1, 5)
No.NameCountTypeFull Name
1MSE5Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3HUT)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HUT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3HUT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HUT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3HUT)

(-) Exons   (0, 0)

(no "Exon" information available for 3HUT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:346
 aligned with Q2RQC5_RHORT | Q2RQC5 from UniProtKB/TrEMBL  Length:394

    Alignment length:346
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378      
         Q2RQC5_RHORT    39 PALLLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVPPGNRRFDDVIDEIEDEAPQAIYLAMAYEDAAPFLRALRARGSALPVYGSSALYSPKFIDLGGPAVEGVRLATAFVLGASDPVVVEFVSAYETLYGAIPTLFAAHGYDAVGIMLAAVGRAGPEVTRESLRDALAATDRYAGVTGITRFDPETRETTKILTRLVVREGDFRVI 384
               SCOP domains d3huta_ A: automated matches                                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee.....hhhhhhhhhhhhhhhhhhhhhh.......eeeeeee...hhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhhh..eee....hhhhh.....eee...hhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhhhhh..eeeeeeee......hhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhh.....eee.hhhhhhhhhhhhhhhhh..eeee.......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh...eee..eeeee......eee..eeeeee..eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hut A  -1 LALLLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTVSmAAGSIYGKEGmPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWmIGDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVPPGNRRFDDVIDEIEDEAPQAIYLAmAYEDAAPFLRALRARGSALPVYGSSALYSPKFIDLGGPAVEGVRLATAFVLGASDPVVVEFVSAYETLYGAIPTLFAAHGYDAVGImLAAVGRAGPEVTRESLRDALAATDRYAGVTGITRFDPETRETTKILTRLVVREGDFRVI 384
                            ||      48        58        68        78        88        98       108       118   |   128    |  138       148       158       168 |     178       188       198       208       218       228       238       248       258       268       278       288       298       308       318      |328       338       348       358       368       378      
                            ||                                                                               122-MSE    133-MSE                              170-MSE                                                             238-MSE                                                                                325-MSE                                                       
                           -1|                                                                                                                                                                                                                                                                                                                                                        
                            40
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3HUT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HUT)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q2RQC5_RHORT | Q2RQC5)
biological process
    GO:0006865    amino acid transport    The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

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