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(-) Description

Title :  CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM BORRELIA BURGDORFERI
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (Ssgcid)
Date :  21 May 09  (Deposition) - 02 Jun 09  (Release) - 02 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Niaid, Ssgcid, Decode, Uw, Sbri, Lyme Disease, Non-Hodgkin Lymphomas, Cytoplasm, Glycolysis, Nad, Oxidoreductase, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. E. Edwards, J. A. Abendroth, B. L. Staker, Seattle Structural Genomics Center For Infectious Disease
Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Borrelia Burgdorferi
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    Atcc: 35210
    Chains: A, B, C, D
    EC Number: 1.2.1.12
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: GAP, BB_0057
    Organism Common: LYME DISEASE SPIROCHETE
    Organism Scientific: BORRELIA BURGDORFERI B31
    Organism Taxid: 224326
    Strain: B31 / CIP 102532 / DSM 4680
    Synonym: GAPDH

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric/Biological Unit (2, 16)
No.NameCountTypeFull Name
1NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
2SO412Ligand/IonSULFATE ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:152 , CYS A:153 , THR A:154 , HIS A:180 , THR A:211 , ARG A:234 , HOH A:408 , HOH A:411BINDING SITE FOR RESIDUE SO4 A 336
02AC2SOFTWAREGLY A:7 , GLY A:9 , ARG A:10 , ILE A:11 , ASN A:30 , ASP A:31 , LEU A:32 , ARG A:75 , SER A:93 , THR A:94 , GLY A:95 , PHE A:97 , THR A:122 , VAL A:123 , ASN A:184 , ASN A:318 , TYR A:322 , SO4 A:338 , HOH A:342 , HOH A:358 , HOH A:385 , HOH A:397 , HOH A:439 , HOH A:447 , HOH A:573 , HOH A:599 , HOH A:757 , HOH A:758 , HOH A:759 , LEU B:191 , HOH B:354BINDING SITE FOR RESIDUE NAD A 337
03AC3SOFTWARETHR A:183 , ASP A:185 , ARG A:198 , ARG A:234 , NAD A:337 , HOH A:358 , HOH A:411 , HOH A:776BINDING SITE FOR RESIDUE SO4 A 338
04AC4SOFTWARELYS A:215 , ASN A:229 , HOH A:359 , HOH A:446BINDING SITE FOR RESIDUE SO4 A 339
05AC5SOFTWARESER B:152 , CYS B:153 , THR B:154 , HIS B:180 , THR B:211 , ARG B:234 , HOH B:372 , HOH B:471 , HOH B:769BINDING SITE FOR RESIDUE SO4 B 336
06AC6SOFTWARELEU A:191 , HOH A:346 , GLY B:7 , GLY B:9 , ARG B:10 , ILE B:11 , ASN B:30 , ASP B:31 , LEU B:32 , ARG B:75 , SER B:93 , THR B:94 , GLY B:95 , PHE B:97 , THR B:122 , VAL B:123 , ASN B:184 , ASN B:318 , TYR B:322 , SO4 B:338 , HOH B:347 , HOH B:352 , HOH B:363 , HOH B:368 , HOH B:396 , HOH B:423 , HOH B:430 , HOH B:466 , HOH B:472 , HOH B:614 , HOH B:761 , HOH B:762 , HOH B:763 , HOH B:764 , HOH B:784BINDING SITE FOR RESIDUE NAD B 337
07AC7SOFTWARETHR B:183 , ASP B:185 , ARG B:198 , ARG B:234 , NAD B:337 , HOH B:368 , HOH B:471 , HOH B:589BINDING SITE FOR RESIDUE SO4 B 338
08AC8SOFTWARELYS B:215 , ASN B:229 , HOH B:348BINDING SITE FOR RESIDUE SO4 B 339
09AC9SOFTWARESER C:152 , CYS C:153 , THR C:154 , THR C:211 , ARG C:234 , HOH C:419 , HOH C:424BINDING SITE FOR RESIDUE SO4 C 336
10BC1SOFTWAREGLY C:7 , GLY C:9 , ARG C:10 , ILE C:11 , ASN C:30 , ASP C:31 , LEU C:32 , ARG C:75 , SER C:93 , THR C:94 , GLY C:95 , PHE C:97 , THR C:122 , VAL C:123 , ASN C:184 , ASN C:318 , TYR C:322 , SO4 C:338 , HOH C:340 , HOH C:351 , HOH C:364 , HOH C:365 , HOH C:366 , HOH C:372 , HOH C:391 , HOH C:400 , HOH C:426 , HOH C:721 , HOH C:774 , HOH C:855 , LEU D:191 , HOH D:359BINDING SITE FOR RESIDUE NAD C 337
11BC2SOFTWARETHR C:183 , ASP C:185 , ARG C:198 , ARG C:234 , NAD C:337 , HOH C:400 , HOH C:857BINDING SITE FOR RESIDUE SO4 C 338
12BC3SOFTWAREMET B:303 , LYS C:215 , ASN C:229 , HOH C:466BINDING SITE FOR RESIDUE SO4 C 339
13BC4SOFTWARESER D:152 , CYS D:153 , THR D:154 , HIS D:180 , THR D:211 , ARG D:234 , HOH D:390 , HOH D:419 , HOH D:603BINDING SITE FOR RESIDUE SO4 D 336
14BC5SOFTWARELEU C:191 , HOH C:352 , GLY D:7 , GLY D:9 , ARG D:10 , ILE D:11 , ASN D:30 , ASP D:31 , LEU D:32 , ARG D:75 , SER D:93 , THR D:94 , GLY D:95 , PHE D:97 , THR D:122 , VAL D:123 , ASN D:184 , ASN D:318 , TYR D:322 , SO4 D:338 , HOH D:347 , HOH D:348 , HOH D:350 , HOH D:375 , HOH D:384 , HOH D:386 , HOH D:387 , HOH D:394 , HOH D:427 , HOH D:562 , HOH D:753 , HOH D:754 , HOH D:755BINDING SITE FOR RESIDUE NAD D 337
15BC6SOFTWARETHR D:183 , ASP D:185 , ARG D:198 , ARG D:234 , NAD D:337 , HOH D:375 , HOH D:848BINDING SITE FOR RESIDUE SO4 D 338
16BC7SOFTWAREMET A:303 , LYS D:215 , ASN D:229 , HOH D:701 , HOH D:750BINDING SITE FOR RESIDUE SO4 D 339

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HJA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3HJA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HJA)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3P_BORBU151-158
 
 
 		  4A:151-158
B:151-158
C:151-158
D:151-158

(-) Exons   (0, 0)

(no "Exon" information available for 3HJA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:334
 aligned with G3P_BORBU | P46795 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    
            G3P_BORBU     1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3hjaA01 A:1-151,A:319-334 NAD(P)-binding Rossmann-like Domain                                                                                          3hjaA02 A:152-318 Dihydrodipicolinate Reductase; domain 2                                                                                                              3hjaA01          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhee...ee....eeee..eeee..eeeeee...hhhhhhhhhhh..eeee.............hhhhhh......eeee........ee.....hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.....hhhhhhhhhh..eeeeeeee.....eeeeeeeee.....hhhhhhhhhhhhhhh......eeee....hhhhhh.....eeee.hhhee....eeeeeeee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hja A   1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    


Chain B from PDB  Type:PROTEIN  Length:334
 aligned with G3P_BORBU | P46795 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    
            G3P_BORBU     1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3hjaB01 B:1-151,B:319-334 NAD(P)-binding Rossmann-like Domain                                                                                          3hjaB02 B:152-318 Dihydrodipicolinate Reductase; domain 2                                                                                                              3hjaB01          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhee...ee....eeee..eeee..eeeeee...hhhhh........eeee.............hhhhhh......eeee........ee.....hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.....hhhhhhhhhh..eeeeeeee.....eeeeeeeee.....hhhhhhhhhhhhh........eeee....hhhhhh.....eeee.hhhee....eeeeeeee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hja B   1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    


Chain C from PDB  Type:PROTEIN  Length:334
 aligned with G3P_BORBU | P46795 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    
            G3P_BORBU     1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3hjaC01 C:1-151,C:319-334 NAD(P)-binding Rossmann-like Domain                                                                                          3hjaC02 C:152-318 Dihydrodipicolinate Reductase; domain 2                                                                                                              3hjaC01          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhee...ee....eeee..eeee..eeeeee...hhhhhhhhhhh..eeee...............hhhhhh....eeee........ee.....hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.....hhhhhhhhhh..eeeeeeee.....eeeeeeeee.....hhhhhhhhhhhhhh.......eeee....hhhhhh.....eeee.hhhee....eeeeeeee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hja C   1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    


Chain D from PDB  Type:PROTEIN  Length:334
 aligned with G3P_BORBU | P46795 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330    
            G3P_BORBU     1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3hjaD01 D:1-151,D:319-334 NAD(P)-binding Rossmann-like Domain                                                                                          3hjaD02 D:152-318 Dihydrodipicolinate Reductase; domain 2                                                                                                              3hjaD01          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhee...ee....eeee..eeee..eeeeee...hhhhh........eeee...............hhhhhh....eeee........ee.....hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee.........................eeee.....hhhhhhhhhh..eeeeeeee.....eeeeeeeee.....hhhhhhhhhhhhhh.......eeee....hhhhhh.....eeee.hhhee....eeeeeeee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hja D   1 MKLAINGFGRIGRNVFKIAFERGIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLV 334
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3HJA)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HJA)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (G3P_BORBU | P46795)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0004365    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity    Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  3hja
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  G3P_BORBU | P46795
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 Related Entries

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(-) Related Entries Specified in the PDB File

3doc CRYSTAL STRUCTURE OF TRKA GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM BRUCELLA MELITENSIS
3gnq CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, TYPE I FROM BURKHOLDERIA PSEUDOMALLEI RELATED ID: BOBUA.00444.A RELATED DB: TARGETDB