3HDT - JenaLib

Title :   CRYSTAL STRUCTURE OF PUTATIVE KINASE FROM CLOSTRIDIUM SYMBIOSUM ATCC 14940

Authors :   C. Chang, L. Freeman, R. Jedrzejczak, A. Joachimiak, Midwest Center Structural Genomics (Mcsg)

Date :   07 May 09 (Deposition) - 26 May 09 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.79

Chains :   Asym./Biol. Unit : A,B

Keywords :   Clostridium Symbiosum Atcc 14940, Putative Kinase, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Chang, L. Freeman, R. Jedrzejczak, A. Joachimiak
Crystal Structure Of Putative Kinase From Clostridium Symbiosum Atcc 14940
To Be Published
PubMed: search

Compounds

Molecule 1 - PUTATIVE KINASE
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PMCSG19
	Expression System Strain	:	BL21(DE3)MAGIC
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	CLOSTRIDIUM SYMBIOSUM ATCC 14940
	Organism Taxid	:	411472

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 12)

Asymmetric/Biological Unit (3, 12)

No.	Name	Count	Type	Full Name
1	CL	2	Ligand/Ion	CHLORIDE ION
2	MSE	8	Mod. Amino Acid	SELENOMETHIONINE
3	PO4	2	Ligand/Ion	PHOSPHATE ION

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:18 , GLU A:19 , TYR A:20 , GLY A:21 , SER A:22 , GLY A:23 , GLY A:24 , ARG A:25 , ARG A:173 , HOH A:233 , HOH A:234	BINDING SITE FOR RESIDUE PO4 A 301
2	AC2	SOFTWARE	GLU A:17 , ARG A:18 , TRP A:185 , HOH A:225	BINDING SITE FOR RESIDUE CL A 302
3	AC3	SOFTWARE	ARG B:18 , GLU B:19 , GLY B:21 , SER B:22 , GLY B:23 , GLY B:24 , ARG B:25 , HOH B:230	BINDING SITE FOR RESIDUE PO4 B 301
4	AC4	SOFTWARE	GLU B:17 , ARG B:18 , TRP B:185	BINDING SITE FOR RESIDUE CL B 302

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:169
                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee....hhhhhhhhhhhhhh.eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhh....eeeeeeee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.eeee....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hdt A   9 NKNLIITIEREYGSGGRIVGKKLAEELGIHFYDDDILKLASEKSPENLFKFQSEVmRELAESEPCIFVGRAAGYVLDQDEDIERLIRIFVYTDKVKKVQRVmEVDCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSmKNYDLPINTTKLTLEETAELIKAYIRLKGFm 219
                                    18        28        38        48  ||   100     | 110       120       130       140       150 |     160       170       180       190       200       210        |
                                                                     51|         106-MSE                                       152-MSE                             188-MSE                        219-MSE
                                                                      94

Chain B from PDB  Type:PROTEIN  Length:169
                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee....hhhhhhhhhhhhhh.eeehhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.eeee.hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hdt B   9 NKNLIITIEREYGSGGRIVGKKLAEELGIHFYDDDILKLASEKSPENLFKFQSEVmRELAESEPCIFVGRAAGYVLDQDEDIERLIRIFVYTDKVKKVQRVmEVDCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSmKNYDLPINTTKLTLEETAELIKAYIRLKGFm 219
                                    18        28        38        48  ||   100     | 110       120       130       140       150 |     160       170       180       190       200       210        |
                                                                     51|         106-MSE                                       152-MSE                             188-MSE                        219-MSE
                                                                      94

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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