Chain A from PDB Type:PROTEIN Length:188
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:188
1
| 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176
A6TWT6_ALKMQ - ----MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWEN 184
SCOP domains d3hb7a_ A: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee...................hhhhh.hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 A -3 YFQGmAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWEN 184
| 6 | 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 | 166 |176
| 11-MSE 158-MSE 173-MSE
1-MSE
Chain B from PDB Type:PROTEIN Length:179
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:187
1
| 6 16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176
A6TWT6_ALKMQ - ----MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
SCOP domains d3hb7b_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeee...............hhhhhhhhhhhhhhhhhhhh....eeeeeeee....--------.......hhhhh.hhhhh.....eeeee.........hhhhhhhhhh..eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 B -3 YFQGmAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRK--------PLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
| 6 | 16 26 36 46 56 | - | 76 86 96 106 116 126 136 146 156 | 166 |176
1-MSE 11-MSE 60 69 158-MSE 173-MSE
Chain C from PDB Type:PROTEIN Length:178
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:182
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
A6TWT6_ALKMQ 2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
SCOP domains d3hb7c_ C: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...............hhhhhhhhhhhhhhhhhhh.....eeeeeeee.....----................hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 C 2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKN----RVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
11 21 31 41 51 61 | 71 81 91 101 111 121 131 141 151 |161 171 | 181
11-MSE 61 66 158-MSE 173-MSE
Chain D from PDB Type:PROTEIN Length:179
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:184
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
A6TWT6_ALKMQ - -MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
SCOP domains d3hb7d_ D: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee.....-----...............hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 D 0 GmAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKN-----VRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
| 9 | 19 29 39 49 59 | |69 79 89 99 109 119 129 139 149 159 169 | 179
1-MSE 11-MSE 61 67 158-MSE 173-MSE
Chain E from PDB Type:PROTEIN Length:189
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:198
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
A6TWT6_ALKMQ 2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWENDEDPWVGGGDAQNKV 199
SCOP domains d3hb7e_ E: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeee.................hhhhhhhhhhhhhhhhh.....eeeeeeee....---------......hhhhh.hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhh...eeehhhhhhhhhhh............... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3hb7 E 2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRK---------LHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWENDEDPWVGGGDAQNKV 199
11 21 31 41 51 |- 71 81 91 101 111 121 131 141 151 |161 171 | 181 191
11-MSE 60 70 158-MSE 173-MSE
Chain F from PDB Type:PROTEIN Length:183
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:183
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
A6TWT6_ALKMQ 1 MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
SCOP domains d3hb7f_ F: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee.....hhhhhh........hhhhh.hhhhh......eeee.........hhhhhhhhhh..eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 F 1 mAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
| 10| 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | 180
1-MSE 11-MSE 158-MSE 173-MSE
Chain G from PDB Type:PROTEIN Length:182
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:182
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
A6TWT6_ALKMQ 2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
SCOP domains d3hb7g_ G: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee.....hhhhhh........hhhhh.hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 G 2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 |161 171 | 181
11-MSE 158-MSE 173-MSE
Chain H from PDB Type:PROTEIN Length:171
aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL Length:200
Alignment length:182
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
A6TWT6_ALKMQ 2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
SCOP domains d3hb7h_ H: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..............hhhhhhhhhhhhhhhhhhhh.--..eeeeeeee....---------............hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhh...eeehhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3hb7 H 2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGR--DDIHLVHIQEAHRK---------LHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
11 21 31 41 | | 51 |- 71 81 91 101 111 121 131 141 151 |161 171 | 181
11-MSE 44 47 60 70 158-MSE 173-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |