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(-) Description

Title :  THE CRYSTAL STRUCTURE OF AN ISOCHORISMATASE-LIKE HYDROLASE FROM ALKALIPHILUS METALLIREDIGENS TO 2.3A
 
Authors :  A. J. Stein, X. Xu, H. Cui, J. Ng, A. Edwards, A. Savchenko, A. Joachimiak Center For Structural Genomics (Mcsg)
Date :  04 May 09  (Deposition) - 07 Jul 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,E  (1x)
Biol. Unit 2:  B,C,D,E  (1x)
Biol. Unit 3:  B,E,F,H  (1x)
Biol. Unit 4:  D,G,H  (1x)
Keywords :  Isochorismatase, Hydrolase, Alkaliphilus, Metalliredigens, Psi, Mcsg, Structural Genomics, Midwest Center For Structural Genomics, Protein Structure Initiative (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Stein, X. Xu, H. Cui, J. Ng, A. Edwards, A. Savchenko, A. Joachimia
The Crystal Structure Of An Isochorismatase-Like Hydrolase From Alkaliphilus Metalliredigens To 2. 3A
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ISOCHORISMATASE HYDROLASE
    Chains: A, C, B, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET DERIVATIVE
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: AMET_4583
    Organism Scientific: ALKALIPHILUS METALLIREDIGENS
    Organism Taxid: 293826
    Strain: QYMF

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABC E   
Biological Unit 2 (1x):  BCDE   
Biological Unit 3 (1x):  B  EF H
Biological Unit 4 (1x):    D  GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 39)

Asymmetric Unit (3, 39)
No.NameCountTypeFull Name
1MSE28Mod. Amino AcidSELENOMETHIONINE
2NA5Ligand/IonSODIUM ION
3NH46Ligand/IonAMMONIUM ION
Biological Unit 1 (2, 18)
No.NameCountTypeFull Name
1MSE14Mod. Amino AcidSELENOMETHIONINE
2NA-1Ligand/IonSODIUM ION
3NH44Ligand/IonAMMONIUM ION
Biological Unit 2 (2, 18)
No.NameCountTypeFull Name
1MSE14Mod. Amino AcidSELENOMETHIONINE
2NA-1Ligand/IonSODIUM ION
3NH44Ligand/IonAMMONIUM ION
Biological Unit 3 (2, 17)
No.NameCountTypeFull Name
1MSE14Mod. Amino AcidSELENOMETHIONINE
2NA-1Ligand/IonSODIUM ION
3NH43Ligand/IonAMMONIUM ION
Biological Unit 4 (2, 12)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE
2NA-1Ligand/IonSODIUM ION
3NH42Ligand/IonAMMONIUM ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:58 , ARG A:59 , ARG A:97BINDING SITE FOR RESIDUE NH4 A 201
02AC2SOFTWAREHIS C:58 , ARG C:59 , ARG C:97BINDING SITE FOR RESIDUE NH4 C 201
03AC3SOFTWAREHIS B:58 , ARG B:59 , ARG B:97BINDING SITE FOR RESIDUE NH4 B 201
04AC4SOFTWAREHIS D:58 , ARG D:59 , ARG D:97BINDING SITE FOR RESIDUE NH4 D 201
05AC5SOFTWAREHIS E:58 , ARG E:59 , ARG E:97BINDING SITE FOR RESIDUE NH4 E 201
06AC6SOFTWAREHIS H:58 , ARG H:59 , ARG H:97BINDING SITE FOR RESIDUE NH4 H 201
07AC7SOFTWARESER A:132 , THR A:135 , HOH A:268 , THR C:135BINDING SITE FOR RESIDUE NA A 202
08AC8SOFTWARESER B:132 , THR B:135 , THR D:135BINDING SITE FOR RESIDUE NA B 202
09AC9SOFTWARETHR E:135 , SER F:132 , THR F:135BINDING SITE FOR RESIDUE NA E 202
10BC1SOFTWARETHR G:135 , SER H:132BINDING SITE FOR RESIDUE NA G 201
11BC2SOFTWARETHR B:76 , TRP B:77 , SER F:148 , HOH F:207BINDING SITE FOR RESIDUE NA F 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HB7)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Val A:124 -Trp A:125
2Val C:124 -Trp C:125
3Val B:124 -Trp B:125
4Val D:124 -Trp D:125
5Val E:124 -Trp E:125
6Val F:124 -Trp F:125
7Val G:124 -Trp G:125
8Val H:124 -Trp H:125

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HB7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3HB7)

(-) Exons   (0, 0)

(no "Exon" information available for 3HB7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:188
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:188
                                1                                                                                                                                                                                       
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176        
         A6TWT6_ALKMQ     - ----MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWEN 184
               SCOP domains d3hb7a_ A: automated matches                                                                                                                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee...................hhhhh.hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 A  -3 YFQGmAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWEN 184
                                |    6    |   16        26        36        46        56        66        76        86        96       106       116       126       136       146       156 |     166      |176        
                                |        11-MSE                                                                                                                                            158-MSE        173-MSE       
                                1-MSE                                                                                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:179
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:187
                                1                                                                                                                                                                                      
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       
         A6TWT6_ALKMQ     - ----MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
               SCOP domains d3hb7b_ B: automated matches                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeee...............hhhhhhhhhhhhhhhhhhhh....eeeeeeee....--------.......hhhhh.hhhhh.....eeeee.........hhhhhhhhhh..eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 B  -3 YFQGmAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRK--------PLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
                                |    6    |   16        26        36        46        56   |     -  |     76        86        96       106       116       126       136       146       156 |     166      |176       
                                1-MSE    11-MSE                                           60       69                                                                                      158-MSE        173-MSE      


Chain C from PDB  Type:PROTEIN  Length:178
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:182
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181  
         A6TWT6_ALKMQ     2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
               SCOP domains d3hb7c_ C: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...............hhhhhhhhhhhhhhhhhhh.....eeeeeeee.....----................hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 C   2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKN----RVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
                                    11        21        31        41        51        61    |   71        81        91       101       111       121       131       141       151      |161       171 |     181  
                                    11-MSE                                            61   66                                                                                         158-MSE        173-MSE      


Chain D from PDB  Type:PROTEIN  Length:179
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:184
                             1                                                                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179    
         A6TWT6_ALKMQ     - -MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
               SCOP domains d3hb7d_ D: automated matches                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee.....-----...............hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 D   0 GmAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKN-----VRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
                             |       9 |      19        29        39        49        59 |     |69        79        89        99       109       119       129       139       149       159       169   |   179    
                             1-MSE    11-MSE                                            61    67                                                                                        158-MSE        173-MSE      


Chain E from PDB  Type:PROTEIN  Length:189
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:198
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191        
         A6TWT6_ALKMQ     2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWENDEDPWVGGGDAQNKV 199
               SCOP domains d3hb7e_ E: automated matches                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.................hhhhhhhhhhhhhhhhh.....eeeeeeee....---------......hhhhh.hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhh...eeehhhhhhhhhhh............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3hb7 E   2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRK---------LHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWENDEDPWVGGGDAQNKV 199
                                    11        21        31        41        51        |-        71        81        91       101       111       121       131       141       151      |161       171 |     181       191        
                                    11-MSE                                           60        70                                                                                     158-MSE        173-MSE                      


Chain F from PDB  Type:PROTEIN  Length:183
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:183
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180   
         A6TWT6_ALKMQ     1 MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
               SCOP domains d3hb7f_ F: automated matches                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee.....hhhhhh........hhhhh.hhhhh......eeee.........hhhhhhhhhh..eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 F   1 mAKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
                            |       10|       20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  |    180   
                            1-MSE    11-MSE                                                                                                                                            158-MSE        173-MSE      


Chain G from PDB  Type:PROTEIN  Length:182
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:182
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181  
         A6TWT6_ALKMQ     2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
               SCOP domains d3hb7g_ G: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..............hhhhhhhhhhhhhhhhhhhhh....eeeeeeee.....hhhhhh........hhhhh.hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhhhhheeehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 G   2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      |161       171 |     181  
                                    11-MSE                                                                                                                                            158-MSE        173-MSE      


Chain H from PDB  Type:PROTEIN  Length:171
 aligned with A6TWT6_ALKMQ | A6TWT6 from UniProtKB/TrEMBL  Length:200

    Alignment length:182
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181  
         A6TWT6_ALKMQ     2 AKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWE 183
               SCOP domains d3hb7h_ H: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..............hhhhhhhhhhhhhhhhhhhh.--..eeeeeeee....---------............hhhhh.....eeeee.........hhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..hhhhhhhhhhhhh...eeehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hb7 H   2 AKHAILVIDmLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGR--DDIHLVHIQEAHRK---------LHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEmHEYGLNDLSIFTKVmTVDQYIQAWE 183
                                    11        21        31        41  |  |  51        |-        71        81        91       101       111       121       131       141       151      |161       171 |     181  
                                    11-MSE                           44 47           60        70                                                                                     158-MSE        173-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3HB7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HB7)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (A6TWT6_ALKMQ | A6TWT6)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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Asymmetric Unit
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  Cis Peptide Bonds
    Val A:124 - Trp A:125   [ RasMol ]  
    Val B:124 - Trp B:125   [ RasMol ]  
    Val C:124 - Trp C:125   [ RasMol ]  
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    Val F:124 - Trp F:125   [ RasMol ]  
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  3hb7
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 Related Entries

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