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(-) Description

Title :  CRYSTAL STRUCTURE OF FLAGELLAR PROTEIN FLIT FROM BORDETELLA BRONCHISEPTICA
 
Authors :  I. A. Shumilin, S. Wang, M. Chruszcz, X. Xu, B. Le, H. Cui, A. Savchenko, A. M. Edwards, A. Joachimiak, W. Minor, Midwest Center For Structu Genomics (Mcsg)
Date :  16 Apr 09  (Deposition) - 28 Apr 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Flagellum (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. A. Shumilin, S. Wang, M. Chruszcz, X. Xu, B. Le, H. Cui, A. Savchenko, A. M. Edwards, A. Joachimiak, W. Minor
Crystal Structure Of Flagellar Protein Flit From Bordetella Bronchiseptica
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - FLAGELLAR PROTEIN FLIT
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: P15TV LIC
    Expression System Strain: BL21 GOLD (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BB2593, FLIT
    Organism Common: ALCALIGENES BRONCHISEPTICUS
    Organism Scientific: BORDETELLA BRONCHISEPTICA
    Organism Taxid: 518

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric/Biological Unit (2, 5)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
2UNK1Mod. Residue

(-) Sites  (0, 0)

(no "Site" information available for 3H3M)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3H3M)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Glu A:64 -Pro A:65
2Gly A:66 -Glu A:67

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3H3M)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3H3M)

(-) Exons   (0, 0)

(no "Exon" information available for 3H3M)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:89
 aligned with A0A0H3LVQ9_B | A0A0H3LVQ9 from UniProtKB/TrEMBL  Length:126

    Alignment length:89
                                    27        37        47        57        67        77        87        97         
         A0A0H3LVQ9_B    18 APVLEIYQDIANLTSRMLAAANASNWDLVLNHGQEYVCLVERLRELEPGEPLDEAARGMKFDLLVRILENDAAVRDLALPQLARLSDLL 106
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3h3mA00 A:18-106 Flagellar protein flit.                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 3h3m A  18 APVLEIYQDIANLTSRmLAAANASNWDLVLNHGQEYVCLVERLRELEPGEPLDEAARGmKFDLLVRILENDAAVRDLALPQLARLSDLL 106
                                    27      | 37        47        57        67        77        87        97         
                                           34-MSE                                    76-MSE                          


Chain B from PDB  Type:PROTEIN  Length:82
 aligned with A0A0H3LVQ9_B | A0A0H3LVQ9 from UniProtKB/TrEMBL  Length:126

    Alignment length:88
                                    28        38        48        58        68        78        88        98        
         A0A0H3LVQ9_B    19 PVLEIYQDIANLTSRMLAAANASNWDLVLNHGQEYVCLVERLRELEPGEPLDEAARGMKFDLLVRILENDAAVRDLALPQLARLSDLL 106
               SCOP domains ---------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3h3mB00 B:19-106 Flagellar protein flit.                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                 3h3m B  19 PVLEIYQDIANLTSRmLAAANASNWDLVLNHGQEYVCLVERLRE------LDEAARGmKFDLLVRILENDAAVRDLALPQLARLSDLL 106
                                    28     |  38        48        58   |     -|      |78        88        98        
                                          34-MSE                      62     69     76-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3H3M)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3H3M)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3H3M)

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  Cis Peptide Bonds
    Glu A:64 - Pro A:65   [ RasMol ]  
    Gly A:66 - Glu A:67   [ RasMol ]  
 

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