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Title :   2.0 ANGSTROM CRYSTAL STRUCTURE OF AN ACYL CARRIER PROTEIN S-MALONYLTRANSFERASE FROM SALMONELLA TYPHIMURIUM.

Authors :   G. Minasov, Z. Wawrzak, T. Skarina, O. Onopriyenko, S. N. Peterson, A. S W. F. Anderson, Center For Structural Genomics Of Infectious (Csgid), Center For Structural Genomics Of Infectious Diseas (Csgid)

Date :   10 Apr 09 (Deposition) - 21 Apr 09 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Acyl Carrier Protein, S-Malonyltransferase, Idp00956, Fabd, Fatty Acid Biosynthesis, Lipid Synthesis, Transferase, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   G. Minasov, Z. Wawrzak, T. Skarina, O. Onopriyenko, S. N. Peterson, A. Savchenko, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
2. 0 Angstrom Crystal Structure Of An Acyl Carrier Protein S-Malonyltransferase From Salmonella Typhimurium.
To Be Published
PubMed: search

Molecule 1 - S-MALONYLTRANSFERASE
	Chains	:	A, B
	EC Number	:	2.3.1.39
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMCSG7
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	FABD, STM1194
	Organism Scientific	:	SALMONELLA TYPHIMURIUM
	Organism Taxid	:	602
	Strain	:	LT2
	Synonym	:	MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE, MCT

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 20)

No.	Name	Count	Type	Full Name
1	MSE	17	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 9)

No.	Name	Count	Type	Full Name
1	MSE	8	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 11)

No.	Name	Count	Type	Full Name
1	MSE	9	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	2	Ligand/Ion	SULFATE ION

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	SER A:15 , VAL A:16 , ALA A:53 , HOH A:405 , HOH A:438 , HOH A:506	BINDING SITE FOR RESIDUE SO4 A 310
2	AC2	SOFTWARE	TYR B:252 , ASN B:253	BINDING SITE FOR RESIDUE SO4 B 310
3	AC3	SOFTWARE	SER B:15 , VAL B:16 , HOH B:400	BINDING SITE FOR RESIDUE SO4 B 311

(no "SS Bond" information available for 3H0P)

Asymmetric Unit

No.	Residues
1	Gly A:51	-	Pro A:52
2	Gly B:51	-	Pro B:52

(no "SAP(SNP)/Variant" information available for 3H0P)

(no "PROSITE Motif" information available for 3H0P)

(no "Exon" information available for 3H0P)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:308
 aligned with FABD_SALTY | O85140 from UniProtKB/Swiss-Prot  Length:309

    Alignment length:308
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301        
           FABD_SALTY     2 TQFAFVFPGQGSQSVGMLAEMAANYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALWRVWQQQGGKMPALMAGHSLGEYSALVCAGVINFADAVRLVEMRGKFMQEAVPEGTGGMSAIIGLDDASIAKACEESAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFSAPTVPVVNNVDVKCETDAAAIRDALVRQLYNPVQWTKSVEFIAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPAALSAALTQ 309
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3h0pA01 A:2-124,A:198-309 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                                3h0pA02 A:125-197  [code=3.30.70.250, no name defined]                   3h0pA01 A:2-124,A:198-309 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..........hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eee.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhhhh...eeeeeeee..eeeeeeehhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhhh..........ee....ee..hhhhhhhhhhhhh....hhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeee..hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h0p A   2 TQFAFVFPGQGSQSVGmLAEmAANYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALWRVWQQQGGKmPALmAGHSLGEYSALVCAGVINFADAVRLVEmRGKFmQEAVPEGTGGmSAIIGLDDASIAKACEESAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALmKPAADKLAVELAKITFSAPTVPVVNNVDVKCETDAAAIRDALVRQLYNPVQWTKSVEFIAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPAALSAALTQ 309
                                    11      | 21|       31        41        51        61        71        81  |   | 91       101       111    |  121       131|      141       151       161       171       181       191       201   |   211       221       231       241       251       261       271       281       291       301        
                                           18-MSE                                                            84-MSE                         116-MSE|        132-MSE                                                                  205-MSE                                                                                                    
                                               22-MSE                                                            88-MSE                          121-MSE

Chain B from PDB  Type:PROTEIN  Length:309
 aligned with FABD_SALTY | O85140 from UniProtKB/Swiss-Prot  Length:309

    Alignment length:309
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300         
           FABD_SALTY     1 MTQFAFVFPGQGSQSVGMLAEMAANYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALWRVWQQQGGKMPALMAGHSLGEYSALVCAGVINFADAVRLVEMRGKFMQEAVPEGTGGMSAIIGLDDASIAKACEESAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFSAPTVPVVNNVDVKCETDAAAIRDALVRQLYNPVQWTKSVEFIAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPAALSAALTQ 309
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -3h0pB01 B:2-124,B:198-309 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                                3h0pB02 B:125-197  [code=3.30.70.250, no name defined]                   3h0pB01 B:2-124,B:198-309 Malonyl-Coenzyme A Acyl Carrier Protein, domain 2                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..........hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eee.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhhhh...eeeeeeee..eeeeeeehhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhh...........ee....ee..hhhhhhhhhhhhh....hhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeee..hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h0p B   1 mTQFAFVFPGQGSQSVGmLAEmAANYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALWRVWQQQGGKmPALmAGHSLGEYSALVCAGVINFADAVRLVEmRGKFmQEAVPEGTGGmSAIIGLDDASIAKACEESAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALmKPAADKLAVELAKITFSAPTVPVVNNVDVKCETDAAAIRDALVRQLYNPVQWTKSVEFIAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPAALSAALTQ 309
                            |       10       |20 |      30        40        50        60        70        80   |   |90       100       110     | 120|      130 |     140       150       160       170       180       190       200    |  210       220       230       240       250       260       270       280       290       300         
                            1-MSE           18-MSE                                                            84-MSE                         116-MSE|        132-MSE                                                                  205-MSE                                                                                                    
                                                22-MSE                                                            88-MSE                          121-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3H0P)

(no "Pfam Domain" information available for 3H0P)

Asymmetric Unit(hide GO term definitions)

Chain A,B (FABD_SALTY | O85140)

molecular function
	GO:0004314	[acyl-carrier-protein] S-malonyltransferase activity	Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein].
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0006633	fatty acid biosynthetic process	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
	GO:0006631	fatty acid metabolic process	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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1mla	THE ESCHERICHIA COLI MALONYL-COA:ACYL CARRIER PROTEIN TRANSACYLASE AT 1.5-ANGSTROMS RESOLUTION. RELATED ID: IDP00956 RELATED DB: TARGETDB

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Ligands, Modified Residues, Ions (2, 20)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

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