3H02 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   2.15 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF NAPHTHOATE SYNTHASE FROM SALMONELLA TYPHIMURIUM.

Authors :   G. Minasov, Z. Wawrzak, T. Skarina, O. Onopriyenko, S. N. Peterson, A. S W. F. Anderson, Center For Structural Genomics Of Infectious (Csgid), Center For Structural Genomics Of Infectious Diseas (Csgid)

Date :   08 Apr 09 (Deposition) - 21 Apr 09 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.15

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F  (1x)
Biol. Unit 2: A,B,C  (1x)
Biol. Unit 3: D,E,F  (1x)

Keywords :   Naphthoate Synthase, Idp00995, Lyase, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   G. Minasov, Z. Wawrzak, T. Skarina, O. Onopriyenko, S. N. Peterson, A. Savchenko, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
2. 15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium.
To Be Published
PubMed: search

Molecule 1 - NAPHTHOATE SYNTHASE
	Chains	:	A, B, C, D, E, F
	EC Number	:	4.1.3.36
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMCSG7
	Expression System Strain	:	BL21-DE3
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	MENB, STM2307
	Organism Scientific	:	SALMONELLA TYPHIMURIUM
	Organism Taxid	:	602
	Strain	:	LT2
	Synonym	:	DIHYDROXYNAPHTOIC ACID SYNTHETASE

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B	C	D	E	F
Biological Unit 2 (1x)	:	A	B	C
Biological Unit 3 (1x)	:				D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 75)

No.	Name	Count	Type	Full Name
1	BCT	7	Ligand/Ion	BICARBONATE ION
2	MSE	66	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 1 (3, 75)

No.	Name	Count	Type	Full Name
1	BCT	7	Ligand/Ion	BICARBONATE ION
2	MSE	66	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 2 (3, 37)

No.	Name	Count	Type	Full Name
1	BCT	3	Ligand/Ion	BICARBONATE ION
2	MSE	33	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 3 (3, 38)

No.	Name	Count	Type	Full Name
1	BCT	4	Ligand/Ion	BICARBONATE ION
2	MSE	33	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (9, 9)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ILE A:174 , HOH A:589 , ILE B:174 , ILE C:174	BINDING SITE FOR RESIDUE SO4 A 286
2	AC2	SOFTWARE	GLY A:132 , GLY A:133 , GLN A:154 , THR A:155 , GLY A:156 , PHE A:162 , TRP A:184	BINDING SITE FOR RESIDUE BCT A 287
3	AC3	SOFTWARE	GLY B:132 , GLY B:133 , GLN B:154 , THR B:155 , GLY B:156 , PHE B:162 , ASP B:163 , TRP B:184 , HOH B:556	BINDING SITE FOR RESIDUE BCT B 286
4	AC4	SOFTWARE	GLY C:132 , GLY C:133 , GLN C:154 , THR C:155 , GLY C:156 , PHE C:162 , TRP C:184 , HOH C:501	BINDING SITE FOR RESIDUE BCT C 286
5	AC5	SOFTWARE	GLY D:132 , GLY D:133 , GLN D:154 , THR D:155 , GLY D:156 , PHE D:162 , TRP D:184	BINDING SITE FOR RESIDUE BCT D 286
6	AC6	SOFTWARE	GLY E:132 , GLY E:133 , GLN E:154 , THR E:155 , GLY E:156 , PHE E:162 , TRP E:184 , HOH E:591	BINDING SITE FOR RESIDUE BCT E 286
7	AC7	SOFTWARE	ILE D:174 , VAL D:175 , GLY D:176 , ILE E:174 , VAL E:175 , GLY E:176 , ILE F:174 , VAL F:175 , GLY F:176 , HOH F:510 , HOH F:583	BINDING SITE FOR RESIDUE SO4 F 286
8	AC8	SOFTWARE	GLY F:132 , GLY F:133 , GLN F:154 , THR F:155 , GLY F:156 , PHE F:162 , TRP F:184 , HOH F:630	BINDING SITE FOR RESIDUE BCT F 287
9	AC9	SOFTWARE	GLU F:20 , TYR F:22 , GLN F:58 , HOH F:483 , HOH F:614	BINDING SITE FOR RESIDUE BCT F 288

(no "SS Bond" information available for 3H02)

(no "Cis Peptide Bond" information available for 3H02)

(no "SAP(SNP)/Variant" information available for 3H02)

Asymmetric Unit (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	MENB_SALTY	123-143	6	A:123-143 B:123-143 C:123-143 D:123-143 E:123-143 F:123-143

Biological Unit 1 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	MENB_SALTY	123-143	6	A:123-143 B:123-143 C:123-143 D:123-143 E:123-143 F:123-143

Biological Unit 2 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	MENB_SALTY	123-143	3	A:123-143 B:123-143 C:123-143 - - -

Biological Unit 3 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	MENB_SALTY	123-143	3	- - - D:123-143 E:123-143 F:123-143

(no "Exon" information available for 3H02)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:266
 aligned with MENB_SALTY | Q7CQ56 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:281
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284 
           MENB_SALTY     5 DETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285
               SCOP domains d3h02a_ A: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 3h02A01 A:5-222 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                  3h02A02 A:223-273                                  ------------ CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh....eee.......eeeeee...eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee....eee.....---------------...hhhhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhhh....hhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h02 A   5 DETmLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEmIQALADARYDDNVGVIILTGEGDKAFCAGGDQ---------------HHLNVLDFQRQIRTCPKPVVAmVAGYSIGGGHVLHmmCDLTIAAENAIFGQTGPKVGSFDGGWGASYmARIVGQKKAREIWFLCRQYDAQQALDmGLVNTVVPLADLEKETVRWCREmLQNSPmALRCLKAALNADCDGQAGLQELAGNATmLFYmTEEGQEGRNAFNQKRQPDFSKFKRNP 285
                               |    14        24        34        44        54 |      64        74        84   |     -       104       114       124|      134    || 144       154       164      |174       184       194   |   204       214      |224  |    234       244       254|   |  264       274       284 
                               |                                              56-MSE                          88             104                  125-MSE       139-MSE                         171-MSE                    198-MSE                221-MSE |                         255-MSE                          
                               8-MSE                                                                                                                             140-MSE                                                                                227-MSE                         259-MSE

Chain B from PDB  Type:PROTEIN  Length:262
 aligned with MENB_SALTY | Q7CQ56 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:279
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276         
           MENB_SALTY     7 TMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285
               SCOP domains d3h02b_ B: automated matches                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 3h02B01 B:7-222 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                3h02B02 B:223-273                                  ------------ CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eee.......eeeeee...eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee....eee...-----------------...hhhhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h02 B   7 TmLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEmIQALADARYDDNVGVIILTGEGDKAFCAGG-----------------HHLNVLDFQRQIRTCPKPVVAmVAGYSIGGGHVLHmmCDLTIAAENAIFGQTGPKVGSFDGGWGASYmARIVGQKKAREIWFLCRQYDAQQALDmGLVNTVVPLADLEKETVRWCREmLQNSPmALRCLKAALNADCDGQAGLQELAGNATmLFYmTEEGQEGRNAFNQKRQPDFSKFKRNP 285
                             |      16        26        36        46        56        66        76        86         -       106       116       126       136  ||   146       156       166    |  176       186       196 |     206       216    |  226|      236       246       256  |    266       276         
                             8-MSE                                          56-MSE                        86               104                  125-MSE       139-MSE                         171-MSE                    198-MSE                221-MSE |                         255-MSE                          
                                                                                                                                                               140-MSE                                                                                227-MSE                         259-MSE

Chain C from PDB  Type:PROTEIN  Length:262
 aligned with MENB_SALTY | Q7CQ56 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:281
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284 
           MENB_SALTY     5 DETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285
               SCOP domains d3h02c_ C: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 3h02C01 C:5-222 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                  3h02C02 C:223-273                                  ------------ CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh.....ee.......eeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee....eee...-------------------.hhhhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h02 C   5 DETmLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEmIQALADARYDDNVGVIILTGEGDKAFCAGG-------------------LNVLDFQRQIRTCPKPVVAmVAGYSIGGGHVLHmmCDLTIAAENAIFGQTGPKVGSFDGGWGASYmARIVGQKKAREIWFLCRQYDAQQALDmGLVNTVVPLADLEKETVRWCREmLQNSPmALRCLKAALNADCDGQAGLQELAGNATmLFYmTEEGQEGRNAFNQKRQPDFSKFKRNP 285
                               |    14        24        34        44        54 |      64        74        84 |       -         - |     114       124|      134    || 144       154       164      |174       184       194   |   204       214      |224  |    234       244       254|   |  264       274       284 
                               8-MSE                                          56-MSE                        86                 106                125-MSE       139-MSE                         171-MSE                    198-MSE                221-MSE |                         255-MSE                          
                                                                                                                                                                 140-MSE                                                                                227-MSE                         259-MSE

Chain D from PDB  Type:PROTEIN  Length:264
 aligned with MENB_SALTY | Q7CQ56 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:281
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284 
           MENB_SALTY     5 DETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285
               SCOP domains d3h02d_ D: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 3h02D01 D:5-222 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                  3h02D02 D:223-273                                  ------------ CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh....eee.......eeeeee...eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee....eee.....-----------------.hhhhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h02 D   5 DETmLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEmIQALADARYDDNVGVIILTGEGDKAFCAGGDQ-----------------LNVLDFQRQIRTCPKPVVAmVAGYSIGGGHVLHmmCDLTIAAENAIFGQTGPKVGSFDGGWGASYmARIVGQKKAREIWFLCRQYDAQQALDmGLVNTVVPLADLEKETVRWCREmLQNSPmALRCLKAALNADCDGQAGLQELAGNATmLFYmTEEGQEGRNAFNQKRQPDFSKFKRNP 285
                               |    14        24        34        44        54 |      64        74        84   |     -         - |     114       124|      134    || 144       154       164      |174       184       194   |   204       214      |224  |    234       244       254|   |  264       274       284 
                               8-MSE                                          56-MSE                          88               106                125-MSE       139-MSE                         171-MSE                    198-MSE                221-MSE |                         255-MSE                          
                                                                                                                                                                 140-MSE                                                                                227-MSE                         259-MSE

Chain E from PDB  Type:PROTEIN  Length:264
 aligned with MENB_SALTY | Q7CQ56 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:281
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284 
           MENB_SALTY     5 DETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285
               SCOP domains d3h02e_ E: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 3h02E01 E:5-222 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                                  3h02E02 E:223-273                                  ------------ CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh....eee.......eeeeee...eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee....eee....-----------------..hhhhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h02 E   5 DETmLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEmIQALADARYDDNVGVIILTGEGDKAFCAGGD-----------------HLNVLDFQRQIRTCPKPVVAmVAGYSIGGGHVLHmmCDLTIAAENAIFGQTGPKVGSFDGGWGASYmARIVGQKKAREIWFLCRQYDAQQALDmGLVNTVVPLADLEKETVRWCREmLQNSPmALRCLKAALNADCDGQAGLQELAGNATmLFYmTEEGQEGRNAFNQKRQPDFSKFKRNP 285
                               |    14        24        34        44        54 |      64        74        84  |      -         -|      114       124|      134    || 144       154       164      |174       184       194   |   204       214      |224  |    234       244       254|   |  264       274       284 
                               8-MSE                                          56-MSE                         87               105                 125-MSE       139-MSE                         171-MSE                    198-MSE                221-MSE |                         255-MSE                          
                                                                                                                                                                 140-MSE                                                                                227-MSE                         259-MSE

Chain F from PDB  Type:PROTEIN  Length:239
 aligned with MENB_SALTY | Q7CQ56 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254      
           MENB_SALTY     5 DETMLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMT 260
               SCOP domains d3h02f_ F: automated matches                                                                                                                                                                                                                                     SCOP domains
               CATH domains ------3h02F01 F:11-222 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                           -------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh....eee.......eeeeee...eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee....eee....-----------------..hhhhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3h02 F   5 DETmLYAPVEWHDCSEGYTDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEmIQALADARYDDNVGVIILTGEGDKAFCAGGD-----------------HLNVLDFQRQIRTCPKPVVAmVAGYSIGGGHVLHmmCDLTIAAENAIFGQTGPKVGSFDGGWGASYmARIVGQKKAREIWFLCRQYDAQQALDmGLVNTVVPLADLEKETVRWCREmLQNSPmALRCLKAALNADCDGQAGLQELAGNATmLFYmT 260
                               |    14        24        34        44        54 |      64        74        84  |      -         -|      114       124|      134    || 144       154       164      |174       184       194   |   204       214      |224  |    234       244       254|   | 
                               8-MSE                                          56-MSE                         87               105                 125-MSE       139-MSE                         171-MSE                    198-MSE                221-MSE |                         255-MSE 
                                                                                                                                                                 140-MSE                                                                                227-MSE                         259-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: ClpP/crotonase (207)

Superfamily: ClpP/crotonase (207)

Family: automated matches (96)

Protein domain: automated matches (96)

Salmonella typhimurium [TaxId: 602] (1)

1a	d3h02a_	A:
1b	d3h02b_	B:
1c	d3h02c_	C:
1d	d3h02d_	D:
1e	d3h02e_	E:
1f	d3h02f_	F:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)

Homologous Superfamily: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)

Salmonella typhimurium. Organism_taxid: 602. Strain: lt2. (1)

1a	3h02A01	A:5-222
1b	3h02D01	D:5-222
1c	3h02E01	E:5-222
1d	3h02B01	B:7-222
1e	3h02C01	C:5-222
1f	3h02F01	F:11-222

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 (25)

Homologous Superfamily: Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 (25)

Salmonella typhimurium. Organism_taxid: 602. Strain: lt2. (1)

2a	3h02A02	A:223-273
2b	3h02B02	B:223-273
2c	3h02C02	C:223-273
2d	3h02D02	D:223-273
2e	3h02E02	E:223-273

(no "Pfam Domain" information available for 3H02)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (MENB_SALTY | Q7CQ56)

molecular function
	GO:0008935	1,4-dihydroxy-2-naphthoyl-CoA synthase activity	Catalysis of the reaction: 4-(2-carboxyphenyl)-4-oxobutanoyl-CoA = 1,4-dihydroxy-2-napthoyl-CoA + H2O.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
biological process
	GO:0009234	menaquinone biosynthetic process	The chemical reactions and pathways resulting in the formation of any of the menaquinones. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones that have vitamin K activity and are known as vitamin K2.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Asymmetric Unit
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	Cis Peptide Bonds
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	3h02
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	MENB_SALTY \| Q7CQ56
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	4.1.3.36
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(no "Entries Sharing at Least One Protein Chain" available for 3H02)

(no "Related Entries Specified in the PDB File" available for 3H02)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 75)

Sites (9, 9)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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Exons (0, 0)

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