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(-) Description

Title :  STRUCTURE OF ARTA AND DNA COMPLEX
 
Authors :  L. Ni, N. Firth, M. A. Schumacher
Date :  02 Apr 09  (Deposition) - 13 Oct 09  (Release) - 01 Dec 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Ribbon-Helix-Helix, Plasmid, Dna Binding Protein/Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Ni, S. O. Jensen, N. Ky Tonthat, T. Berg, S. M. Kwong, F. H. Guan, M. H. Brown, R. A. Skurray, N. Firth, M. A. Schumacher
The Staphylococcus Aureus Psk41 Plasmid-Encoded Arta Protein Is A Master Regulator Of Plasmid Transmission Genes And Contains A Rhh Motif Used In Alternate Dna-Binding Modes.
Nucleic Acids Res. V. 37 6970 2009
PubMed-ID: 19759211  |  Reference-DOI: 10.1093/NAR/GKP756
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE REGULATOR OF TRANSFER GENES ARTA
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21 DE3
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ARTA, SAUSA300_PUSA030009
    Organism Scientific: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS USA300
    Organism Taxid: 367830
 
Molecule 2 - DNA (5'-D(*AP*CP*AP*TP*GP*AP*CP*AP*TP*G)-3')
    Chains: C
    Engineered: YES
    Synthetic: YES
 
Molecule 3 - DNA (5'-D(*AP*CP*AP*TP*GP*TP*CP*AP*TP*GP*T)-3')
    Chains: D
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3GXQ)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:53
 aligned with A0A0H2XIU6_S | A0A0H2XIU6 from UniProtKB/TrEMBL  Length:62

    Alignment length:53
                                    16        26        36        46        56   
          A0A0H2XIU6_S    7 NSVFFGKKKKVSLHLLVDPDMKDEIIKYAQEKDFDNVSQAGREILKKGLEQIK 59
               SCOP domains ----------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeeeehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------- Transcript
                  3gxq A  7 NSVFFGKKKKVSLHLLVDPDMKDEIIKYAQEKDFDNVSQAGREILKKGLEQIA 59
                                    16        26        36        46        56   


Chain B from PDB  Type:PROTEIN  Length:54
 aligned with A0A0H2XIU6_S | A0A0H2XIU6 from UniProtKB/TrEMBL  Length:62

    Alignment length:54
                                    15        25        35        45        55    
          A0A0H2XIU6_S    6 ENSVFFGKKKKVSLHLLVDPDMKDEIIKYAQEKDFDNVSQAGREILKKGLEQIK 59
               SCOP domains ------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhh.....eeeeeeehhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------ Transcript
                  3gxq B  6 ENSVFFGKKKKVSLHLLVDPDMKDEIIKYAQEKDFDNVSQAGREILKKGLEQIA 59
                                    15        25        35        45        55    


Chain C from PDB  Type:DNA  Length:10
                                         
                  3gxq C  2 ACATGACATG 11
                                    11


Chain D from PDB  Type:DNA  Length:11
                                          
                  3gxq D  2 ACATGTCATGT 12
                                    11
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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