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(-) Description

Title :  CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION CT1051 FROM CHLOROBIUM TEPIDUM
 
Authors :  Y. Fan, C. Chang, A. Sather, S. Clancy, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  20 Feb 09  (Deposition) - 17 Mar 09  (Release) - 17 Mar 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.66
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Chlorobium Tepidum, Cbs Domain, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Fan, C. Chang, A. Sather, S. Clancy, A. Joachimiak
Crystal Structure Of A Protein With Unknown Function Ct1051 From Chlorobium Tepidum
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN CT1051
    Atcc: 49652
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG19
    Expression System Strain: BL21(DE3)MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 2-126
    Gene: CT1051
    Organism Scientific: CHLOROBIUM TEPIDUM TLS
    Organism Taxid: 194439
    Strain: TLS / DSM 12025

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric/Biological Unit (3, 6)
No.NameCountTypeFull Name
1EPE2Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2MSE2Mod. Amino AcidSELENOMETHIONINE
3SO42Ligand/IonSULFATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:97 , SER A:113 , ARG A:114 , LYS A:115 , HOH A:153 , HOH A:164 , SER B:97 , ARG B:114 , SO4 B:126BINDING SITE FOR RESIDUE SO4 A 126
2AC2SOFTWAREARG A:79 , PRO A:80 , GLY A:81 , GLU A:82 , HOH A:212BINDING SITE FOR RESIDUE EPE A 127
3AC3SOFTWARESER A:97 , ARG A:114 , SO4 A:126 , SER B:97 , SER B:113 , ARG B:114 , LYS B:115 , HOH B:190BINDING SITE FOR RESIDUE SO4 B 126
4AC4SOFTWAREARG B:79 , PRO B:80 , GLY B:81 , GLU B:82 , ASP B:103 , HOH B:136BINDING SITE FOR RESIDUE EPE B 127

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:35 -A:96
2B:35 -B:96

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3GBY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:127
 aligned with Q8KDJ9_CHLTE | Q8KDJ9 from UniProtKB/TrEMBL  Length:224

    Alignment length:127
                             1                                                                                                                             
                             |       9        19        29        39        49        59        69        79        89        99       109       119       
         Q8KDJ9_CHLTE     - -MSVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERI 126
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3gbyA00 A:-1-125 CBS-domain                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh......ee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhh............hhhhh..........hhhhhhhhhhhh...eeeee.....eeeeeehhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3gby A  -1 NASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGmVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERI 125
                                     8        18        28        38        48        58        68        78        88        98       108       118       
                                                                           47-MSE                                                                          


Chain B from PDB  Type:PROTEIN  Length:127
 aligned with Q8KDJ9_CHLTE | Q8KDJ9 from UniProtKB/TrEMBL  Length:224

    Alignment length:127
                             1                                                                                                                             
                             |       9        19        29        39        49        59        69        79        89        99       109       119       
         Q8KDJ9_CHLTE     - -MSVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERI 126
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3gbyB00 B:-1-125 CBS-domain                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh......ee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhh............hhhhh..........hhhhhhhhhhhh...eeeee.....eeeeeehhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3gby B  -1 NASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGmVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERI 125
                                     8        18        28        38        48        58        68        78        88        98       108       118       
                                                                           47-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3GBY)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3GBY)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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