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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION WITH CYSTATIN-LIKE FOLD (NP_639274.1) FROM XANTHOMONAS CAMPESTRIS AT 1.90 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  12 Feb 09  (Deposition) - 24 Feb 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Np_639274. 1, Snoal-Like Polyketide Cyclase, Protein Of Unknown Function With Cystatin-Like Fold, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Protein Of Unknown Function With Cystatin-Like Fold (Np_639274. 1) From Xanthomonas Campestri At 1. 90 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN OF UNKNOWN FUNCTION WITH CYSTATIN-LIKE FOLD
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: NP_639274.1, XCC3934
    Organism Scientific: XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS
    Organism Taxid: 340
    Synonym: UNCHARACTERIZED PROTEIN XCC3934

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 10)

Asymmetric Unit (3, 10)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
2GOL2Ligand/IonGLYCEROL
3MSE6Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (2, 16)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GOL4Ligand/IonGLYCEROL
3MSE12Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:89 , ALA A:90 , GLY A:92BINDING SITE FOR RESIDUE CL A 130
2AC2SOFTWAREGLN A:15 , ARG A:69 , ALA A:70 , ARG A:129BINDING SITE FOR RESIDUE CL A 131
3AC3SOFTWAREHIS A:33 , GLN A:34 , PRO A:35 , GLY A:42 , THR A:43 , SER A:76 , GLY A:77 , ARG A:114 , HOH A:174BINDING SITE FOR RESIDUE GOL A 132
4AC4SOFTWARETYR A:10 , ILE A:14 , ILE A:67 , ASP A:101BINDING SITE FOR RESIDUE GOL A 133

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3G8Z)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3G8Z)

 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:129
 aligned with Q8P3Y3_XANCP | Q8P3Y3 from UniProtKB/TrEMBL  Length:129

    Alignment length:129
                                    10        20        30        40        50        60        70        80        90       100       110       120         
         Q8P3Y3_XANCP     1 MNTIDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSNGTFAISRADDYMASGDWVAITLEFSGQANGVTLKQAGVDLLRIEDGKIVEVRLFSADQTQEDAFWGR 129
               SCOP domains d3g8za_ A: automated matches                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhheeeeeeeee.......eeeehhhhhhhhhhhhhhhh....eeeeeeeeeee..eeeeeeeeeeee..eeeeeeeeeeeeee..eeeeeeeee.hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3g8z A   1 mNTIDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGmAVVGPmLGKmmEVSNGTFAISRADDYmASGDWVAITLEFSGQANGVTLKQAGVDLLRIEDGKIVEVRLFSADQTQEDAFWGR 129
                            |       10        20        30        40      | 50  |   ||60        70   |    80        90       100       110       120         
                            |                                            47-MSE |   ||              74-MSE                                                   
                            1-MSE                                              53-MSE|                                                                       
                                                                                   57-MSE                                                                    
                                                                                    58-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3G8Z)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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