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(-) Description

Title :  CRYSTAL STRUCTURE OF THE TAIL TERMINATOR PROTEIN FROM PHAGE LAMBDA (GPU-D74A)
 
Authors :  L. G. Pell, A. Liu, E. Edmonds, L. W. Donaldson, P. L. Howell, A. R. Davidson
Date :  23 Jan 09  (Deposition) - 26 May 09  (Release) - 30 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,E,F,I,K  (1x)
Biol. Unit 2:  C,D,G,H,J,L  (1x)
Biol. Unit 3:  A,B,C,D,E,F,G,H,I,J,K,L  (1x)
Keywords :  Mixed Alpha-Beta Fold, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. G. Pell, A. Liu, L. Edmonds, L. W. Donaldson, P. L. Howell, A. R. Davidson
The X-Ray Crystal Structure Of The Phage Lambda Tail Terminator Protein Reveals The Biologically Relevant Hexameric Ring Structure And Demonstrates A Conserved Mechanism Of Tail Termination Among Diverse Long-Tailed Phages.
J. Mol. Biol. V. 389 938 2009
PubMed-ID: 19426744  |  Reference-DOI: 10.1016/J.JMB.2009.04.072
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MINOR TAIL PROTEIN U
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21 CODONPLUS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: U
    Mutation: YES
    Organism Common: BACTERIOPHAGE LAMBDA
    Organism Scientific: ENTEROBACTERIA PHAGE LAMBDA
    Organism Taxid: 10710

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): AB  EF  I K 
Biological Unit 2 (1x):   CD  GH J L
Biological Unit 3 (1x): ABCDEFGHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 73)

Asymmetric Unit (2, 73)
No.NameCountTypeFull Name
1MSE60Mod. Amino AcidSELENOMETHIONINE
2SO413Ligand/IonSULFATE ION
Biological Unit 1 (2, 37)
No.NameCountTypeFull Name
1MSE30Mod. Amino AcidSELENOMETHIONINE
2SO47Ligand/IonSULFATE ION
Biological Unit 2 (2, 36)
No.NameCountTypeFull Name
1MSE30Mod. Amino AcidSELENOMETHIONINE
2SO46Ligand/IonSULFATE ION
Biological Unit 3 (2, 73)
No.NameCountTypeFull Name
1MSE60Mod. Amino AcidSELENOMETHIONINE
2SO413Ligand/IonSULFATE ION

(-) Sites  (13, 13)

Asymmetric Unit (13, 13)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:25 , HOH A:200 , ARG K:87BINDING SITE FOR RESIDUE SO4 A 135
02AC2SOFTWAREARG A:113BINDING SITE FOR RESIDUE SO4 A 136
03AC3SOFTWAREARG B:113BINDING SITE FOR RESIDUE SO4 B 135
04AC4SOFTWAREARG C:113 , HOH C:161BINDING SITE FOR RESIDUE SO4 C 135
05AC5SOFTWAREARG D:113BINDING SITE FOR RESIDUE SO4 D 135
06AC6SOFTWAREARG E:113BINDING SITE FOR RESIDUE SO4 E 135
07AC7SOFTWAREARG F:113BINDING SITE FOR RESIDUE SO4 F 135
08AC8SOFTWAREARG G:113BINDING SITE FOR RESIDUE SO4 G 135
09AC9SOFTWAREARG H:113BINDING SITE FOR RESIDUE SO4 H 135
10BC1SOFTWAREARG I:113BINDING SITE FOR RESIDUE SO4 I 135
11BC2SOFTWAREARG J:113BINDING SITE FOR RESIDUE SO4 J 135
12BC3SOFTWAREARG K:113BINDING SITE FOR RESIDUE SO4 K 135
13BC4SOFTWAREARG L:113BINDING SITE FOR RESIDUE SO4 L 135

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3FZ2)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Phe A:39 -Pro A:40
2Phe B:39 -Pro B:40
3Phe C:39 -Pro C:40
4Phe D:39 -Pro D:40
5Phe E:39 -Pro E:40
6Phe F:39 -Pro F:40
7Phe G:39 -Pro G:40
8Phe H:39 -Pro H:40
9Phe I:39 -Pro I:40
10Phe J:39 -Pro J:40
11Phe K:39 -Pro K:40
12Phe L:39 -Pro L:40

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3FZ2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3FZ2)

(-) Exons   (0, 0)

(no "Exon" information available for 3FZ2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:129
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:132
                             1                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
           TTTP_LAMBD     - -MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2a_ A: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh...eeee............eeeeeeeeeeeee.---..eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhh.hhhhhhhh.eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fz2 A   3 HmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGE---SDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                             |      12        22        32        42        52 |   |  62        72        82 |      92       102  |    112       122       132 |
                             |                                                54  58                        84-MSE  92-MSE      105-MSE                      134-MSE
                             4-MSE                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:129
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:132
                             1                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
           TTTP_LAMBD     - -MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2b_ B: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh....eeee......hhhhh.eeeeeeeeeeee..---..eeeeeeeeeeeee...hhhhhhhhhhhhh.hhhhhhhhhhhhh.eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fz2 B   3 HmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGE---SDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                             |      12        22        32        42        52 |   |  62        72        82 |      92       102  |    112       122       132 |
                             |                                                54  58                        84-MSE  92-MSE      105-MSE                      134-MSE
                             4-MSE                                                                                                                              


Chain C from PDB  Type:PROTEIN  Length:131
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:131
                                    10        20        30        40        50        60        70        80        90       100       110       120       130 
           TTTP_LAMBD     1 MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2c_ C: automated matches                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh...eeee............eeeeeeeeeeeeee....eeeeeeeeeeeeee...hhhhhhhhhhhhhhhhhh.hhhhhhhh.eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fz2 C   4 mKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                            |       13        23        33        43        53        63        73        83|       93       103 |     113       123       133|
                            |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                            4-MSE                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:132
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:132
                             1                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
           TTTP_LAMBD     - -MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2d_ D: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.....eeee......hhhhh.eeeeeeeeeeee.......eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhh.hhhhhh...eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fz2 D   3 HmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                             |      12        22        32        42        52        62        72        82 |      92       102  |    112       122       132 |
                             |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                             4-MSE                                                                                                                              


Chain E from PDB  Type:PROTEIN  Length:133
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:133
                              1                                                                                                                                      
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128   
           TTTP_LAMBD     - --MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2e_ E: automated matches                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.....eeee......hhhhh.eeeeeeeeeee........eeeeeeeeeeeee...hhhhhhhhhhhhh.hhhhhhhhhhh...eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fz2 E   2 SHmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                              |     11        21        31        41        51        61        71        81  |     91|      101   |   111       121       131  |
                              |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                              4-MSE                                                                                                                              


Chain F from PDB  Type:PROTEIN  Length:133
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:133
                              1                                                                                                                                      
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128   
           TTTP_LAMBD     - --MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2f_ F: automated matches                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhh...eeee......hhhhh.eeeeeeeeeee.hhhhh..eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhh.hhhhhhhh.eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fz2 F   2 SHmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                              |     11        21        31        41        51        61        71        81  |     91|      101   |   111       121       131  |
                              |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                              4-MSE                                                                                                                              


Chain G from PDB  Type:PROTEIN  Length:132
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:132
                             1                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
           TTTP_LAMBD     - -MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2g_ G: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh...eeee......hhhhh.eeeeeeeeeeeeee....eeeeeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhhhhhhh.eeeeeeeeeee.......eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fz2 G   3 HmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                             |      12        22        32        42        52        62        72        82 |      92       102  |    112       122       132 |
                             |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                             4-MSE                                                                                                                              


Chain H from PDB  Type:PROTEIN  Length:133
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:133
                              1                                                                                                                                      
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128   
           TTTP_LAMBD     - --MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2h_ H: automated matches                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhh...eee.......hhhhh.eeeeeeeeeee.........eeeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeeeee......eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fz2 H   2 SHmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                              |     11        21        31        41        51        61        71        81  |     91|      101   |   111       121       131  |
                              |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                              4-MSE                                                                                                                              


Chain I from PDB  Type:PROTEIN  Length:131
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:131
                                    10        20        30        40        50        60        70        80        90       100       110       120       130 
           TTTP_LAMBD     1 MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2i_ I: automated matches                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh...eeee............eeeeeeeeeeeeee....eeeeeeeeeeeeee...hhhhhhhhhhhhhhhhhh.hhhhhhhh.eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fz2 I   4 mKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                            |       13        23        33        43        53        63        73        83|       93       103 |     113       123       133|
                            |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                            4-MSE                                                                                                                              


Chain J from PDB  Type:PROTEIN  Length:133
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:133
                              1                                                                                                                                      
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128   
           TTTP_LAMBD     - --MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2j_ J: automated matches                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.....eeee......hhhhh.eeeeeeeeeee........eeeeeeeeeeeee...hhhhhhhhhhhhh.hhhhhhhhhhh...eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fz2 J   2 SHmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                              |     11        21        31        41        51        61        71        81  |     91|      101   |   111       121       131  |
                              |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                              4-MSE                                                                                                                              


Chain K from PDB  Type:PROTEIN  Length:132
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:132
                             1                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
           TTTP_LAMBD     - -MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2k_ K: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh...eeee......hhhhh.eeeeeeeeeee........eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fz2 K   3 HmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                             |      12        22        32        42        52        62        72        82 |      92       102  |    112       122       132 |
                             |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                             4-MSE                                                                                                                              


Chain L from PDB  Type:PROTEIN  Length:132
 aligned with TTTP_LAMBD | P03732 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:132
                             1                                                                                                                                      
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
           TTTP_LAMBD     - -MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 131
               SCOP domains d3fz2l_ L: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.....eeee............eeeeeeeeeee.........eeeeeeeeeeee...hhhhhhhhhhhhhhhhhh.hhhhhh...eeeeeeeeeee......eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fz2 L   3 HmKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTGAEYTGEELDSDTWQAELHIEVFLPAQVPASELDAWmESRIYPVmSDIPALSDLITSmVASGYDYRRDDDAGLWSSADLTYVITYEm 134
                             |      12        22        32        42        52        62        72        82 |      92       102  |    112       122       132 |
                             |                                                                              84-MSE  92-MSE      105-MSE                      134-MSE
                             4-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3FZ2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3FZ2)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (TTTP_LAMBD | P03732)
biological process
    GO:0019076    viral release from host cell    The dissemination of mature viral particles from the host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.
cellular component
    GO:0030430    host cell cytoplasm    The cytoplasm of a host cell.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.
    GO:0098015    virus tail    Part of the virion that may be used to recognize, attach and inject the viral genome and accessory proteins into the host cell.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TTTP_LAMBD | P03732: 1z1z 3fzb

(-) Related Entries Specified in the PDB File

3fzb CRYSTAL STRUCTURE OF THE TAIL TERMINATOR PROTEIN FROM PHAGE LAMBDA (GPU-WT)