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(-) Description

Title :  CRYSTAL STRUCTURE OF GALLUS GALLUS BETA-PARVALBUMIN (AVIAN THYMIC HORMONE)
 
Authors :  J. P. Schuermann, J. J. Tanner, M. T. Henzl
Date :  09 Jan 09  (Deposition) - 19 Jan 10  (Release) - 21 Apr 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  G  (1x)
Biol. Unit 8:  H  (1x)
Keywords :  Calcium-Binding Protein, Ef-Hand, Parvalbumin, Acetylation, Calcium, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. P. Schuermann, A. Tan, J. J. Tanner, M. T. Henzl
Structure Of Avian Thymic Hormone, A High-Affinity Avian Beta-Parvalbumin, In The Ca2+-Free And Ca2+-Bound States.
J. Mol. Biol. V. 397 991 2010
PubMed-ID: 20156445  |  Reference-DOI: 10.1016/J.JMB.2010.02.014

(-) Compounds

Molecule 1 - PARVALBUMIN, THYMIC
    ChainsA, B, C, D, E, F, G, H
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET11
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System VectorPLASMID
    Organism CommonCHICKEN
    Organism ScientificGALLUS GALLUS
    Organism Taxid9031
    SynonymAVIAN THYMIC HORMONE, ATH, THYMUS-SPECIFIC ANTIGEN T1

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)A       
Biological Unit 2 (1x) B      
Biological Unit 3 (1x)  C     
Biological Unit 4 (1x)   D    
Biological Unit 5 (1x)    E   
Biological Unit 6 (1x)     F  
Biological Unit 7 (1x)      G 
Biological Unit 8 (1x)       H

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 23)

Asymmetric Unit (3, 23)
No.NameCountTypeFull Name
1CA16Ligand/IonCALCIUM ION
2GOL3Ligand/IonGLYCEROL
3SO44Ligand/IonSULFATE ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
3SO41Ligand/IonSULFATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
3SO41Ligand/IonSULFATE ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL1Ligand/IonGLYCEROL
3SO4-1Ligand/IonSULFATE ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL1Ligand/IonGLYCEROL
3SO4-1Ligand/IonSULFATE ION
Biological Unit 5 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
3SO4-1Ligand/IonSULFATE ION
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL1Ligand/IonGLYCEROL
3SO4-1Ligand/IonSULFATE ION
Biological Unit 7 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
3SO41Ligand/IonSULFATE ION
Biological Unit 8 (1, 1)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GOL-1Ligand/IonGLYCEROL
3SO41Ligand/IonSULFATE ION

(-) Sites  (23, 23)

Asymmetric Unit (23, 23)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:51 , ASP A:53 , SER A:55 , PHE A:57 , GLU A:59 , GLU A:62BINDING SITE FOR RESIDUE CA A 110
02AC2SOFTWAREASP A:90 , ASP A:92 , ASP A:94 , LYS A:96 , GLU A:101 , HOH A:120BINDING SITE FOR RESIDUE CA A 111
03AC3SOFTWARETHR A:78 , SER A:79 , HOH A:119BINDING SITE FOR RESIDUE SO4 A 112
04AC4SOFTWAREASP B:51 , ASP B:53 , SER B:55 , PHE B:57 , GLU B:59 , GLU B:62BINDING SITE FOR RESIDUE CA B 110
05AC5SOFTWAREASP B:90 , ASP B:92 , ASP B:94 , LYS B:96 , GLU B:101 , HOH B:203BINDING SITE FOR RESIDUE CA B 111
06AC6SOFTWAREALA A:1 , SER B:7 , LYS B:9 , HOH B:229BINDING SITE FOR RESIDUE SO4 B 112
07AC7SOFTWAREASP C:51 , ASP C:53 , SER C:55 , PHE C:57 , GLU C:59 , GLU C:62BINDING SITE FOR RESIDUE CA C 110
08AC8SOFTWAREASP C:90 , ASP C:92 , ASP C:94 , LYS C:96 , GLU C:101 , HOH C:131BINDING SITE FOR RESIDUE CA C 111
09AC9SOFTWARESER C:7 , LYS C:9 , HOH C:306 , ALA D:1 , ALA H:20BINDING SITE FOR RESIDUE GOL C 112
10BC1SOFTWAREASP D:51 , ASP D:53 , SER D:55 , PHE D:57 , GLU D:59 , GLU D:62BINDING SITE FOR RESIDUE CA D 110
11BC2SOFTWAREASP D:90 , ASP D:92 , ASP D:94 , LYS D:96 , GLU D:101 , HOH D:351BINDING SITE FOR RESIDUE CA D 111
12BC3SOFTWAREPHE D:57 , ASP D:92 , GLY D:98 , VAL D:99 , GLU D:100 , GLU D:101 , HOH D:351BINDING SITE FOR RESIDUE GOL D 112
13BC4SOFTWAREASP E:51 , ASP E:53 , SER E:55 , PHE E:57 , GLU E:59 , GLU E:62BINDING SITE FOR RESIDUE CA E 110
14BC5SOFTWAREASP E:90 , ASP E:92 , ASP E:94 , LYS E:96 , GLU E:101 , HOH E:125BINDING SITE FOR RESIDUE CA E 111
15BC6SOFTWAREASP F:51 , ASP F:53 , SER F:55 , PHE F:57 , GLU F:59 , GLU F:62BINDING SITE FOR RESIDUE CA F 110
16BC7SOFTWAREASP F:90 , ASP F:92 , ASP F:94 , LYS F:96 , GLU F:101 , HOH F:176BINDING SITE FOR RESIDUE CA F 111
17BC8SOFTWAREPHE F:24 , ASN F:25 , TYR F:26 , HOH F:120 , LYS H:27BINDING SITE FOR RESIDUE GOL F 112
18BC9SOFTWAREASP G:51 , ASP G:53 , SER G:55 , PHE G:57 , GLU G:59 , GLU G:62BINDING SITE FOR RESIDUE CA G 110
19CC1SOFTWAREASP G:90 , ASP G:92 , ASP G:94 , LYS G:96 , GLU G:101 , HOH G:206BINDING SITE FOR RESIDUE CA G 111
20CC2SOFTWARESER E:7 , LYS E:9 , HOH E:447 , ALA G:1BINDING SITE FOR RESIDUE SO4 G 112
21CC3SOFTWAREASP H:51 , ASP H:53 , SER H:55 , PHE H:57 , GLU H:59 , GLU H:62BINDING SITE FOR RESIDUE CA H 110
22CC4SOFTWAREASP H:90 , ASP H:92 , ASP H:94 , LYS H:96 , GLU H:101 , HOH H:120BINDING SITE FOR RESIDUE CA H 111
23CC5SOFTWAREALA F:1 , HOH F:300 , SER H:7 , LYS H:9BINDING SITE FOR RESIDUE SO4 H 112

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3FS7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3FS7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3FS7)

(-) PROSITE Motifs  (2, 32)

Asymmetric Unit (2, 32)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  16A:38-73
B:38-73
C:38-73
D:38-73
E:38-73
F:38-73
G:38-73
H:38-73
A:77-108
B:77-107
C:77-108
D:77-108
E:77-108
F:77-107
G:77-107
H:77-108
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  16A:51-63
B:51-63
C:51-63
D:51-63
E:51-63
F:51-63
G:51-63
H:51-63
A:90-102
B:90-102
C:90-102
D:90-102
E:90-102
F:90-102
G:90-102
H:90-102
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2A:38-73
-
-
-
-
-
-
-
A:77-108
-
-
-
-
-
-
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2A:51-63
-
-
-
-
-
-
-
A:90-102
-
-
-
-
-
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
B:38-73
-
-
-
-
-
-
-
B:77-107
-
-
-
-
-
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
B:51-63
-
-
-
-
-
-
-
B:90-102
-
-
-
-
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
-
C:38-73
-
-
-
-
-
-
-
C:77-108
-
-
-
-
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
-
C:51-63
-
-
-
-
-
-
-
C:90-102
-
-
-
-
-
Biological Unit 4 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
-
-
D:38-73
-
-
-
-
-
-
-
D:77-108
-
-
-
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
-
-
D:51-63
-
-
-
-
-
-
-
D:90-102
-
-
-
-
Biological Unit 5 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
-
-
-
E:38-73
-
-
-
-
-
-
-
E:77-108
-
-
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
-
-
-
E:51-63
-
-
-
-
-
-
-
E:90-102
-
-
-
Biological Unit 6 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
-
-
-
-
F:38-73
-
-
-
-
-
-
-
F:77-107
-
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
-
-
-
-
F:51-63
-
-
-
-
-
-
-
F:90-102
-
-
Biological Unit 7 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
-
-
-
-
-
G:38-73
-
-
-
-
-
-
-
G:77-107
-
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
-
-
-
-
-
G:51-63
-
-
-
-
-
-
-
G:90-102
-
Biological Unit 8 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.PRVT_CHICK39-74
 
 
 
 
 
 
 
78-109
 
 
 
 
 
 
 
  2-
-
-
-
-
-
-
H:38-73
-
-
-
-
-
-
-
H:77-108
2EF_HAND_1PS00018 EF-hand calcium-binding domain.PRVT_CHICK52-64
 
 
 
 
 
 
 
91-103
 
 
 
 
 
 
 
  2-
-
-
-
-
-
-
H:51-63
-
-
-
-
-
-
-
H:90-102

(-) Exons   (0, 0)

(no "Exon" information available for 3FS7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:108
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:108
                                    11        21        31        41        51        61        71        81        91       101        
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
               SCOP domains d3fs7a_ A: Parvalbumin                                                                                       SCOP domains
               CATH domains 3fs7A00 A:1-108 EF-hand                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhhh....hhhhhhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhh.......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: A:38-73             ---EF_HAND_2  PDB: A:77-108         PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 3fs7 A   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
                                    10        20        30        40        50        60        70        80        90       100        

Chain B from PDB  Type:PROTEIN  Length:107
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:107
                                    11        21        31        41        51        61        71        81        91       101       
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
               SCOP domains d3fs7b_ B: Parvalbumin                                                                                      SCOP domains
               CATH domains 3fs7B00 B:1-107 EF-hand                                                                                     CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhh.......hhhhhhhhhhhhh.....eeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: B:38-73             ---EF_HAND_2  PDB: B:77-107        PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ----- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 3fs7 B   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
                                    10        20        30        40        50        60        70        80        90       100       

Chain C from PDB  Type:PROTEIN  Length:108
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:108
                                    11        21        31        41        51        61        71        81        91       101        
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
               SCOP domains d3fs7c_ C: Parvalbumin                                                                                       SCOP domains
               CATH domains 3fs7C00 C:1-108 EF-hand                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhh.......hhhhhhhhhhhhh.....eeehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: C:38-73             ---EF_HAND_2  PDB: C:77-108         PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 3fs7 C   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
                                    10        20        30        40        50        60        70        80        90       100        

Chain D from PDB  Type:PROTEIN  Length:108
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:108
                                    11        21        31        41        51        61        71        81        91       101        
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
               SCOP domains d3fs7d_ D: Parvalbumin                                                                                       SCOP domains
               CATH domains 3fs7D00 D:1-108 EF-hand                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhh.......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: D:38-73             ---EF_HAND_2  PDB: D:77-108         PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 3fs7 D   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
                                    10        20        30        40        50        60        70        80        90       100        

Chain E from PDB  Type:PROTEIN  Length:108
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:108
                                    11        21        31        41        51        61        71        81        91       101        
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
               SCOP domains d3fs7e_ E: Parvalbumin                                                                                       SCOP domains
               CATH domains 3fs7E00 E:1-108 EF-hand                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhh.......hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: E:38-73             ---EF_HAND_2  PDB: E:77-108         PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 3fs7 E   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
                                    10        20        30        40        50        60        70        80        90       100        

Chain F from PDB  Type:PROTEIN  Length:107
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:107
                                    11        21        31        41        51        61        71        81        91       101       
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
               SCOP domains d3fs7f_ F: Parvalbumin                                                                                      SCOP domains
               CATH domains 3fs7F00 F:1-107 EF-hand                                                                                     CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhh.......hhhhhhhhhhhhh.....eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: F:38-73             ---EF_HAND_2  PDB: F:77-107        PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ----- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 3fs7 F   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
                                    10        20        30        40        50        60        70        80        90       100       

Chain G from PDB  Type:PROTEIN  Length:107
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:107
                                    11        21        31        41        51        61        71        81        91       101       
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
               SCOP domains d3fs7g_ G: Parvalbumin                                                                                      SCOP domains
               CATH domains 3fs7G00 G:1-107 EF-hand                                                                                     CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhh.....hhhhhhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhh.......hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: G:38-73             ---EF_HAND_2  PDB: G:77-107        PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ----- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 3fs7 G   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
                                    10        20        30        40        50        60        70        80        90       100       

Chain H from PDB  Type:PROTEIN  Length:108
 aligned with PRVT_CHICK | P19753 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:108
                                    11        21        31        41        51        61        71        81        91       101        
           PRVT_CHICK     2 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
               SCOP domains d3fs7h_ H: Parvalbumin                                                                                       SCOP domains
               CATH domains 3fs7H00 H:1-108 EF-hand                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.......hhhhhhhhhhhhh.......hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------------------------------EF_HAND_2  PDB: H:38-73             ---EF_HAND_2  PDB: H:77-108         PROSITE (1)
                PROSITE (2) --------------------------------------------------EF_HAND_1    --------------------------EF_HAND_1    ------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 3fs7 H   1 AITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
                                    10        20        30        40        50        60        70        80        90       100        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit

(-) CATH Domains  (1, 8)

Asymmetric Unit
1a3fs7B00B:1-107
1b3fs7F00F:1-107
1c3fs7G00G:1-107
1d3fs7A00A:1-108
1e3fs7C00C:1-108
1f3fs7D00D:1-108
1g3fs7E00E:1-108
1h3fs7H00H:1-108

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3FS7)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (PRVT_CHICK | P19753)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PRVT_CHICK | P197532kqy

(-) Related Entries Specified in the PDB File

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