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(-) Description

Title :  CRYSTAL STRUCTURE OF ACBP FROM MONILIOPHTHORA PERNICIOSA
 
Authors :  P. S. Monzani, H. M. Pereira, F. A. Melo, F. V. Meirelles, G. Oliva, J. C. M. Cascardo
Date :  04 Jan 09  (Deposition) - 17 Nov 09  (Release) - 15 Dec 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.61
Chains :  Asym./Biol. Unit :  A
Keywords :  Acbp, Moniliophthora Perniciosa, Cacao Disease, Fatty Acid Metabolism, Lipid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. S. Monzani, H. M. Pereira, F. A. Melo, F. V. Meirelles, G. Oliva, J. C. Cascardo
A New Topology Of Acbp From Moniliophthora Perniciosa.
Biochim. Biophys. Acta V. 1804 115 2010
PubMed-ID: 19782157  |  Reference-DOI: 10.1016/J.BBAPAP.2009.09.020
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ACYL-COA BINDING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: MPACBP
    Organism Scientific: MONILIOPHTHORA PERNICIOSA
    Organism Taxid: 153609

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1MES1Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
2ZN1Ligand/IonZINC ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:2 , GLU A:74 , GLU A:102 , HOH A:302 , HOH A:312BINDING SITE FOR RESIDUE ZN A 107
2AC2SOFTWARELYS A:25 , PHE A:38 , LYS A:61 , TYR A:80 , HOH A:172BINDING SITE FOR RESIDUE MES A 108

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3FP5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3FP5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3FP5)

(-) Exons   (0, 0)

(no "Exon" information available for 3FP5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:106
 aligned with D1MPT1_MONPR | D1MPT1 from UniProtKB/TrEMBL  Length:106

    Alignment length:106
                                    10        20        30        40        50        60        70        80        90       100      
         D1MPT1_MONPR     1 SHMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVEKLLEILKKADTEESKKYIAEIEAA 106
               SCOP domains d3fp5a_ A: automated matches                                                                               SCOP domains
               CATH domains 3fp5A00 A:1-106  [code=1.20.80.10, no name defined]                                                        CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 3fp5 A   1 SHMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVEKLLEILKKADTEESKKYIAEIEAA 106
                                    10        20        30        40        50        60        70        80        90       100
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3FP5)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (D1MPT1_MONPR | D1MPT1)
molecular function
    GO:0000062    fatty-acyl-CoA binding    Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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