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(-) Description

Title :  CUT-2B; NCN-PT-PINCER-CUTINASE HYBRID
 
Authors :  L. Rutten, J. P. B. A. Mannie, M. Lutz, P. Gros
Date :  05 Oct 08  (Deposition) - 28 Jul 09  (Release) - 28 Jul 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.22
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein-Metallopincer Complex, Glycoprotein, Hydrolase, Secreted, Serine Esterase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Rutten, B. Wieczorek, J. P. B. A. Mannie, C. A. Kruithof, H. P. Dijkstra, M. R. Egmond, M. Lutz, R. J. M. Klein Gebbink, P. Gros, G. Van Koten
Solid-State Structural Characterization Of Cutinase-Ece-Pincer-Metal Hybrids
Chemistry V. 15 4270 2009
PubMed-ID: 19219875  |  Reference-DOI: 10.1002/CHEM.200801995
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CUTINASE 1
    Chains: A
    EC Number: 3.1.1.74
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PUC19
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: FUSARIUM SOLANI F. PISI
    Organism Taxid: 70791
    Synonym: CUTIN HYDROLASE 1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SXC1Ligand/IonBROMO(4-{3-[(R)-ETHOXY(4-NITROPHENOXY)PHOSPHORYL]PROPYL}-2,6-BIS[(METHYLSULFANYL-KAPPAS)METHYL]PHENYL-KAPPAC~1~)PALLADIUM(2+)

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:42 , LEU A:81 , GLY A:82 , ASN A:84 , TYR A:119 , SER A:120 , GLN A:121 , LEU A:182 , ILE A:183 , HIS A:188BINDING SITE FOR RESIDUE SXC A 215

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:31 -A:109
2A:171 -A:178

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3ESD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ESD)

(-) PROSITE Motifs  (2, 2)

Asymmetric/Biological Unit (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CUTINASE_1PS00155 Cutinase, serine active site.CUTI1_FUSSO126-138  1A:110-122
2CUTINASE_2PS00931 Cutinase, aspartate and histidine active sites.CUTI1_FUSSO187-204  1A:171-188

(-) Exons   (0, 0)

(no "Exon" information available for 3ESD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:195
 aligned with CUTI1_FUSSO | P00590 from UniProtKB/Swiss-Prot  Length:230

    Alignment length:195
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222     
          CUTI1_FUSSO    33 RTTRDDLINGNSASCRDVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKNLQNRGRIPNYPADRTKVFCNTGDLVCTGSLIVAAPHLAYGPDARGPAPEFLIEKVRAVR 227
               SCOP domains d3esda_ A: automated matches                                                                                                                                                                        SCOP domains
               CATH domains 3esdA00 A:17-211  [code=3.40.50.1820, no name defined]                                                                                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhh..eeeeee...........hhhhhhhhhhhhhh...eeeee........hhhhhh....hhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhhhhhheeeeeee...............hhh.eeee....hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------CUTINASE_1   ------------------------------------------------CUTINASE_2        ----------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3esd A  17 RTTRDDLINGNSASCADVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKNLQNRGRIPNYPADRTKVFCKTGDLVCTGSLIVAAPHLAYGPDARGPAPEFLIEKVRAVR 211
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ESD)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (CUTI1_FUSSO | P00590)
molecular function
    GO:0052689    carboxylic ester hydrolase activity    Catalysis of the hydrolysis of a carboxylic ester bond.
    GO:0050525    cutinase activity    Catalysis of the reaction: cutin + H2O = cutin monomers.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CUTI1_FUSSO | P00590: 1agy 1cex 1cua 1cub 1cuc 1cud 1cue 1cuf 1cug 1cuh 1cui 1cuj 1cus 1cuu 1cuv 1cuw 1cux 1cuy 1cuz 1ffa 1ffb 1ffc 1ffd 1ffe 1oxm 1xza 1xzb 1xzc 1xzd 1xze 1xzf 1xzg 1xzh 1xzi 1xzj 1xzk 1xzl 1xzm 2cut 3ef3 3esa 3esb 3esc 3qpa 3qpc

(-) Related Entries Specified in the PDB File

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