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(-) Description

Title :  CRYSTAL STRUCTURE OF THE N-ACETYLMANNOSAMINE KINASE DOMAIN OF HUMAN GNE PROTEIN
 
Authors :  L. Nedyalkova, Y. Tong, W. M. Rabeh, B. Hong, W. Tempel, F. Mackenzie, C. H. Arrowsmith, A. M. Edwards, C. Bountra, J. Weigelt, A. Bochkarev, Structural Genomics Consortium (Sgc)
Date :  26 Sep 08  (Deposition) - 07 Oct 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.84
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A (1x),B (1x)
Biol. Unit 2:  C  (2x)
Biol. Unit 3:  A,B  (1x)
Keywords :  Non-Protein Kinase, Sialic Acid Biosynthesis, Structural Genomics Consortium, Sgc, Allosteric Enzyme, Atp-Binding, Disease Mutation, Isomerase, Kinase, Multifunctional Enzyme, Nucleotide-Binding, Phosphoprotein, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Tong, W. Tempel, L. Nedyalkova, F. Mackenzie, H. W. Park
Crystal Structure Of The N-Acetylmannosamine Kinase Domain Of Gne.
Plos One V. 4 E7165 2009
PubMed-ID: 19841673  |  Reference-DOI: 10.1371/JOURNAL.PONE.0007165

(-) Compounds

Molecule 1 - BIFUNCTIONAL UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE/N- ACETYLMANNOSAMINE KINASE
    ChainsA, B, C
    EC Number5.1.3.14, 2.7.1.60
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28-MHL
    Expression System StrainBL21-CODONPLUS(DE3)-RIL
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 406-722
    GeneGNE, GLCNE
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymUDP-GLCNAC-2-EPIMERASE/MANAC KINASE, UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE, URIDINE DIPHOSPHATE-N-ACETYLGLUCOSAMINE-2-EPIMERASE, UDP-GLCNAC-2-EPIMERASE, N-ACETYLMANNOSAMINE KINASE, MANAC KINASE

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABC
Biological Unit 1 (1x)A (1x)B (1x) 
Biological Unit 2 (2x)  C
Biological Unit 3 (1x)AB 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 7)

Asymmetric Unit (2, 7)
No.NameCountTypeFull Name
1UNX4Ligand/IonUNKNOWN ATOM OR ION
2ZN3Ligand/IonZINC ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1UNX2Ligand/IonUNKNOWN ATOM OR ION
2ZN-1Ligand/IonZINC ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1UNX2Ligand/IonUNKNOWN ATOM OR ION
2ZN-1Ligand/IonZINC ION
Biological Unit 3 (1, 3)
No.NameCountTypeFull Name
1UNX3Ligand/IonUNKNOWN ATOM OR ION
2ZN-1Ligand/IonZINC ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:569 , CYS A:579 , CYS A:581 , CYS A:586BINDING SITE FOR RESIDUE ZN A 801
2AC2SOFTWAREHIS B:569 , CYS B:579 , CYS B:581 , CYS B:586BINDING SITE FOR RESIDUE ZN B 801
3AC3SOFTWAREHIS C:569 , CYS C:579 , CYS C:581 , CYS C:586BINDING SITE FOR RESIDUE ZN C 801
4AC4SOFTWAREHIS A:604BINDING SITE FOR RESIDUE UNX A 1
5AC5SOFTWAREARG A:420 , ASP A:703 , ALA A:705BINDING SITE FOR RESIDUE UNX A 2
6AC6SOFTWAREPRO B:704 , ALA B:705BINDING SITE FOR RESIDUE UNX B 3
7AC7SOFTWAREGLU C:525 , GLY C:529 , GLN C:530 , ASP C:700BINDING SITE FOR RESIDUE UNX C 4

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EO3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3EO3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (16, 48)

Asymmetric Unit (16, 48)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_017955A460VGLCNE_HUMANDisease (NM)121908631A/B/CA460V
02UniProtVAR_021781I472TGLCNE_HUMANDisease (NM)  ---A/B/CI472T
03UniProtVAR_021782N519SGLCNE_HUMANDisease (NM)  ---A/B/CN519S
04UniProtVAR_017956A524VGLCNE_HUMANDisease (NM)764698870A/B/CA524V
05UniProtVAR_017957F528CGLCNE_HUMANDisease (NM)  ---A/B/CF528C
06UniProtVAR_017958I557TGLCNE_HUMANDisease (NM)  ---A/B/CI557T
07UniProtVAR_017959V572LGLCNE_HUMANDisease (NM)121908632A/B/CV572L
08UniProtVAR_017960G576EGLCNE_HUMANDisease (NM)121908625A/B/CG576E
09UniProtVAR_017961I587TGLCNE_HUMANDisease (NM)748949603A/B/CI587T
10UniProtVAR_021783A600TGLCNE_HUMANDisease (NM)387906347A/B/CA600T
11UniProtVAR_021784A630TGLCNE_HUMANDisease (NM)  ---A/B/CA630T
12UniProtVAR_017962A631TGLCNE_HUMANDisease (NM)121908626A/B/CA631T
13UniProtVAR_017963A631VGLCNE_HUMANDisease (NM)62541771A/B/CA631V
14UniProtVAR_017964Y675HGLCNE_HUMANDisease (NM)  ---A/B/CY675H
15UniProtVAR_017965V696MGLCNE_HUMANDisease (NM)121908627A/B/CV696M
16UniProtVAR_017966M712TGLCNE_HUMANDisease (NM)28937594A/B/CM712T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (16, 32)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_017955A460VGLCNE_HUMANDisease (NM)121908631A/BA460V
02UniProtVAR_021781I472TGLCNE_HUMANDisease (NM)  ---A/BI472T
03UniProtVAR_021782N519SGLCNE_HUMANDisease (NM)  ---A/BN519S
04UniProtVAR_017956A524VGLCNE_HUMANDisease (NM)764698870A/BA524V
05UniProtVAR_017957F528CGLCNE_HUMANDisease (NM)  ---A/BF528C
06UniProtVAR_017958I557TGLCNE_HUMANDisease (NM)  ---A/BI557T
07UniProtVAR_017959V572LGLCNE_HUMANDisease (NM)121908632A/BV572L
08UniProtVAR_017960G576EGLCNE_HUMANDisease (NM)121908625A/BG576E
09UniProtVAR_017961I587TGLCNE_HUMANDisease (NM)748949603A/BI587T
10UniProtVAR_021783A600TGLCNE_HUMANDisease (NM)387906347A/BA600T
11UniProtVAR_021784A630TGLCNE_HUMANDisease (NM)  ---A/BA630T
12UniProtVAR_017962A631TGLCNE_HUMANDisease (NM)121908626A/BA631T
13UniProtVAR_017963A631VGLCNE_HUMANDisease (NM)62541771A/BA631V
14UniProtVAR_017964Y675HGLCNE_HUMANDisease (NM)  ---A/BY675H
15UniProtVAR_017965V696MGLCNE_HUMANDisease (NM)121908627A/BV696M
16UniProtVAR_017966M712TGLCNE_HUMANDisease (NM)28937594A/BM712T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (16, 32)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_017955A460VGLCNE_HUMANDisease (NM)121908631CA460V
02UniProtVAR_021781I472TGLCNE_HUMANDisease (NM)  ---CI472T
03UniProtVAR_021782N519SGLCNE_HUMANDisease (NM)  ---CN519S
04UniProtVAR_017956A524VGLCNE_HUMANDisease (NM)764698870CA524V
05UniProtVAR_017957F528CGLCNE_HUMANDisease (NM)  ---CF528C
06UniProtVAR_017958I557TGLCNE_HUMANDisease (NM)  ---CI557T
07UniProtVAR_017959V572LGLCNE_HUMANDisease (NM)121908632CV572L
08UniProtVAR_017960G576EGLCNE_HUMANDisease (NM)121908625CG576E
09UniProtVAR_017961I587TGLCNE_HUMANDisease (NM)748949603CI587T
10UniProtVAR_021783A600TGLCNE_HUMANDisease (NM)387906347CA600T
11UniProtVAR_021784A630TGLCNE_HUMANDisease (NM)  ---CA630T
12UniProtVAR_017962A631TGLCNE_HUMANDisease (NM)121908626CA631T
13UniProtVAR_017963A631VGLCNE_HUMANDisease (NM)62541771CA631V
14UniProtVAR_017964Y675HGLCNE_HUMANDisease (NM)  ---CY675H
15UniProtVAR_017965V696MGLCNE_HUMANDisease (NM)121908627CV696M
16UniProtVAR_017966M712TGLCNE_HUMANDisease (NM)28937594CM712T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (16, 32)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_017955A460VGLCNE_HUMANDisease (NM)121908631A/BA460V
02UniProtVAR_021781I472TGLCNE_HUMANDisease (NM)  ---A/BI472T
03UniProtVAR_021782N519SGLCNE_HUMANDisease (NM)  ---A/BN519S
04UniProtVAR_017956A524VGLCNE_HUMANDisease (NM)764698870A/BA524V
05UniProtVAR_017957F528CGLCNE_HUMANDisease (NM)  ---A/BF528C
06UniProtVAR_017958I557TGLCNE_HUMANDisease (NM)  ---A/BI557T
07UniProtVAR_017959V572LGLCNE_HUMANDisease (NM)121908632A/BV572L
08UniProtVAR_017960G576EGLCNE_HUMANDisease (NM)121908625A/BG576E
09UniProtVAR_017961I587TGLCNE_HUMANDisease (NM)748949603A/BI587T
10UniProtVAR_021783A600TGLCNE_HUMANDisease (NM)387906347A/BA600T
11UniProtVAR_021784A630TGLCNE_HUMANDisease (NM)  ---A/BA630T
12UniProtVAR_017962A631TGLCNE_HUMANDisease (NM)121908626A/BA631T
13UniProtVAR_017963A631VGLCNE_HUMANDisease (NM)62541771A/BA631V
14UniProtVAR_017964Y675HGLCNE_HUMANDisease (NM)  ---A/BY675H
15UniProtVAR_017965V696MGLCNE_HUMANDisease (NM)121908627A/BV696M
16UniProtVAR_017966M712TGLCNE_HUMANDisease (NM)28937594A/BM712T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3EO3)

(-) Exons   (0, 0)

(no "Exon" information available for 3EO3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:288
 aligned with GLCNE_HUMAN | Q9Y223 from UniProtKB/Swiss-Prot  Length:722

    Alignment length:312
                                   415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715  
          GLCNE_HUMAN   406 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT 717
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee...eeeeeeee....eeeeeeee...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.------------------------.hhhhhhhhhh..eeeehhhhhhhhhhhhh........eeeeee...eeeeeee..ee.........hhhhh...............hhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------V-----------T----------------------------------------------S----V---C----------------------------T--------------L---E----------T------------T-----------------------------TT-------------------------------------------H--------------------M---------------T----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V-------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3eo3 A 406 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGIST------------------------DLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT 717
                                   415       425       435       445       455       465        |-         -         -   |   505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715  
                                                                                              474                      499                                                                                                                                                                                                                          

Chain B from PDB  Type:PROTEIN  Length:283
 aligned with GLCNE_HUMAN | Q9Y223 from UniProtKB/Swiss-Prot  Length:722

    Alignment length:312
                                   415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715  
          GLCNE_HUMAN   406 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT 717
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeee....hhhhhhhhhhhhhhhhhhhhhhh...eeeeee..------------------------.hhhhhhhhhh..eee.hhhhhhhhhhhhh........eeeeee...eeeeeee..ee.........hhhhh...............hhhhhhhhhhhhhhhhhhhhh.........-----..hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhhhhh. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------V-----------T----------------------------------------------S----V---C----------------------------T--------------L---E----------T------------T-----------------------------TT-------------------------------------------H--------------------M---------------T----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V-------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3eo3 B 406 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGIST------------------------DLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMS-----AVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT 717
                                   415       425       435       445       455       465        |-         -         -   |   505       515       525       535       545       555       565       575       585       595       605       615     | 625       635       645       655       665       675       685       695       705       715  
                                                                                              474                      499                                                                                                                 615   621                                                                                                

Chain C from PDB  Type:PROTEIN  Length:286
 aligned with GLCNE_HUMAN | Q9Y223 from UniProtKB/Swiss-Prot  Length:722

    Alignment length:312
                                   415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715  
          GLCNE_HUMAN   406 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT 717
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee.-.eeeeeeee....eeeeeeee...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.------------------------.hhhhhhhhh...eeeehhhhhhhhhhhhh........eeeeee...eeeeeee..ee.........hhhhh...............hhhhhhhhhhhhhhhhhhhh.............-...hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------V-----------T----------------------------------------------S----V---C----------------------------T--------------L---E----------T------------T-----------------------------TT-------------------------------------------H--------------------M---------------T----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V-------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3eo3 C 406 TLSALAVDLG-TNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGIST------------------------DLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPK-EAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT 717
                                   415 |     425       435       445       455       465        |-         -         -   |   505       515       525       535       545       555       565       575       585       595       605       615  | |  625       635       645       655       665       675       685       695       705       715  
                                   415 |                                                      474                      499                                                                                                                    618 |                                                                                                 
                                     417                                                                                                                                                                                                        620                                                                                                 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3EO3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3EO3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EO3)

(-) Gene Ontology  (20, 20)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C   (GLCNE_HUMAN | Q9Y223)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0009384    N-acylmannosamine kinase activity    Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate.
    GO:0008761    UDP-N-acetylglucosamine 2-epimerase activity    Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0006045    N-acetylglucosamine biosynthetic process    The chemical reactions and pathways resulting in the formation of N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.
    GO:0006054    N-acetylneuraminate metabolic process    The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.
    GO:0006047    UDP-N-acetylglucosamine metabolic process    The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
    GO:0046835    carbohydrate phosphorylation    The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        GLCNE_HUMAN | Q9Y2232yhw 2yhy 2yi1 4zht

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