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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE N-ACETYLTRANSFERASE FROM LACTOBACILLUS PLANTARUM
 
Authors :  C. Chang, H. Li, G. Cobb, A. Joachimiak, Midwest Center For Structur Genomics (Mcsg)
Date :  08 Sep 08  (Deposition) - 23 Sep 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.42
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Acetyltransferase, Lactobacillus Plantarum, Structural Genomics, Psi- 2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, H. Li, G. Cobb, A. Joachimiak
Crystal Structure Of Putative N-Acetyltransferase From Lactobacillus Plantarum
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE ACETYLTRANSFERASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3) DERIVATIVES
    Expression System Vector Type: PLASMID
    Gene: LP_1797
    Organism Scientific: LACTOBACILLUS PLANTARUM WCFS1
    Organism Taxid: 220668

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 9)

Asymmetric Unit (4, 9)
No.NameCountTypeFull Name
1FMT4Ligand/IonFORMIC ACID
2GOL1Ligand/IonGLYCEROL
3MSE3Mod. Amino AcidSELENOMETHIONINE
4PO41Ligand/IonPHOSPHATE ION
Biological Unit 1 (4, 18)
No.NameCountTypeFull Name
1FMT8Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
3MSE6Mod. Amino AcidSELENOMETHIONINE
4PO42Ligand/IonPHOSPHATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:70 , HIS A:108 , THR A:125 , ALA A:126 , HOH A:219 , HOH A:236BINDING SITE FOR RESIDUE FMT A 201
2AC2SOFTWARETHR A:76 , ARG A:81 , GLY A:82 , GLY A:86 , HOH A:210 , HOH A:232BINDING SITE FOR RESIDUE FMT A 202
3AC3SOFTWAREGLY A:121 , ARG A:123 , HIS A:140 , GLN A:142BINDING SITE FOR RESIDUE FMT A 203
4AC4SOFTWAREPHE A:23 , GLU A:34 , ARG A:73 , ASP A:132BINDING SITE FOR RESIDUE GOL A 205

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EFA)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gly A:127 -Pro A:128

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3EFA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3EFA)

(-) Exons   (0, 0)

(no "Exon" information available for 3EFA)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:146
 aligned with F9UPE4_LACPL | F9UPE4 from UniProtKB/TrEMBL  Length:144

    Alignment length:146
                              1                                                                                                                                               
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138      
         F9UPE4_LACPL     - --MKIIFSASPANRAAAYALRQAVFVEERGISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQADHVMRFGRVCTRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGPYDEDGAPVVIMHKQLL 144
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3efaA00 A:-1-144  [code=3.40.630.30, no name defined]                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.hhhhhhhhhhhhhhhh......hhhhhh.........eeeeeee..eeeeeeeeee....eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhh..eeee.........eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3efa A  -1 NAmKIIFSASPANRAAAYALRQAVFVEERGISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQADHVmRFGRVCTRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGPYDEDGAPVVImHKQLL 144
                              |      8        18        28        38        48        58        68|       78        88        98       108       118       128       138|     
                              |                                                                  69-MSE                                                               139-MSE 
                              1-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3EFA)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EFA)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (F9UPE4_LACPL | F9UPE4)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).

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