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(-) Description

Title :  THE CRYSTAL STRUCTURE OF THE DOMAIN OF THE PUTATIVE LIGHT AND REDOX SENSING HISTIDINE KINASE FROM HALOARCULA MARISMORTUI
 
Authors :  R. Zhang, L. Volkart, L. Freeman, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  04 Sep 08  (Deposition) - 04 Nov 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  A
Keywords :  Light And Redox Sensing Histidine Kinase, Structural Genomics, Psi, Mcsg, Protein Structure Initiative, Midwest Center For Structural Genomics, Kinase, Phosphoprotein, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. Zhang, L. Volkart, L. Freeman, A. Joachimiak
The Crystal Structure Of The Domain Of The Putative Light And Redox Sensing Histidine Kinase From Haloarcula Marismortui
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE LIGHT AND REDOX SENSING HISTIDINE KINASE
    ChainsA
    EC Number2.7.13.3
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPMCSG7
    Expression System StrainBL21
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneRRNAC2416
    Organism CommonHALOBACTERIUM MARISMORTUI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    StrainATCC 43049

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PG51Ligand/Ion1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:71BINDING SITE FOR RESIDUE PG5 A 126

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:116
 aligned with Q5UZS4_HALMA | Q5UZS4 from UniProtKB/TrEMBL  Length:1047

    Alignment length:116
                                   163       173       183       193       203       213       223       233       243       253       263      
         Q5UZS4_HALMA   154 ERRVRELTEATNDILWEFTADLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQSLMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 269
               SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3eehA00 A:10-125  [code=3.30.450.20, no name defined]                                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh....eeeeee.....eeee.hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhh..eeeeeeeeeee.....eeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 3eeh A  10 ERRVRELTEATNDILWEFTADLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQSLMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125
                                    19        29        39        49        59        69        79        89        99       109       119      

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q5UZS4_HALMA | Q5UZS4)
molecular function
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000155    phosphorelay sensor kinase activity    Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
biological process
    GO:0000160    phosphorelay signal transduction system    A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
    GO:0023014    signal transduction by protein phosphorylation    A process in which the transfer of one or more phosphate groups to a substrate transmits a signal to the phosphorylated substrate.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

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