3EE5 - JenaLib

Asymmetric Unit (38, 38)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PRO A:183 , PHE A:184 , ARG A:185 , ARG A:187 , PHE A:222 , ASP A:248 , VAL A:249 , ASP A:250 , LYS A:275 , TRP A:310 , HIS A:340 , HIS A:343 , ARG A:345 , ASP A:346 , GOL A:417 , MN A:611 , HOH A:3012 , HOH A:3040 , HOH A:3058 , HOH A:3071	BINDING SITE FOR RESIDUE UDH A 399
02	AC2	SOFTWARE	PHE A:276 , TYR A:282 , TYR A:285 , TRP A:310 , GLY A:311 , GLY A:312 , ASP A:314 , ASP A:315 , ARG A:355 , GAL A:401 , GOL A:417 , HOH A:3052	BINDING SITE FOR RESIDUE NAG A 400
03	AC3	SOFTWARE	2NA A:100 , NAG A:400 , HOH A:3052	BINDING SITE FOR RESIDUE GAL A 401
04	AC4	SOFTWARE	TYR A:282 , GLN A:284 , GAL A:401 , PHE B:323 , ARG B:324 , GLY B:325	BINDING SITE FOR RESIDUE 2NA A 100
05	AC5	SOFTWARE	ASN A:160 , TYR A:167 , PRO A:169 , ARG A:170 , HOH A:3021 , HOH A:3074 , HOH A:3080 , HOH A:3136	BINDING SITE FOR RESIDUE SO4 A 602
06	AC6	SOFTWARE	GLU A:144 , PHE A:145 , ASN A:146 , ARG A:339	BINDING SITE FOR RESIDUE SO4 A 604
07	AC7	SOFTWARE	THR A:375 , TYR A:376	BINDING SITE FOR RESIDUE SO4 A 607
08	AC8	SOFTWARE	ARG A:267 , PRO A:331	BINDING SITE FOR RESIDUE SO4 A 609
09	AC9	SOFTWARE	SER A:344 , HOH A:3404	BINDING SITE FOR RESIDUE SO4 A 610
10	BC1	SOFTWARE	ASP A:250 , HIS A:340 , HIS A:343 , UDH A:399 , HOH A:3012	BINDING SITE FOR RESIDUE MN A 611
11	BC2	SOFTWARE	PRO B:183 , PHE B:184 , ARG B:185 , ARG B:187 , PHE B:222 , ASP B:248 , VAL B:249 , ASP B:250 , LYS B:275 , TRP B:310 , HIS B:340 , HIS B:343 , ARG B:345 , ASP B:346 , MN B:400 , SO4 B:611 , HOH B:3154 , HOH B:3155 , HOH B:3185	BINDING SITE FOR RESIDUE UDH B1399
12	BC3	SOFTWARE	TRP A:310 , GLY A:311 , GLU A:313 , ASP A:314 , UDH A:399 , NAG A:400 , HOH A:3261 , HOH A:3325	BINDING SITE FOR RESIDUE GOL A 417
13	BC4	SOFTWARE	PHE B:276 , TYR B:282 , TYR B:285 , TRP B:310 , GLY B:311 , GLY B:312 , ASP B:314 , ASP B:315 , ARG B:355 , GOL B:414 , GAL B:1401 , HOH B:3279 , HOH B:3368 , HOH B:3392	BINDING SITE FOR RESIDUE NAG B1400
14	BC5	SOFTWARE	2NA B:101 , NAG B:1400 , HOH B:3279 , HOH B:3354	BINDING SITE FOR RESIDUE GAL B1401
15	BC6	SOFTWARE	ALA A:217 , THR A:220 , ASP A:393 , GLY A:395 , THR A:396 , HOH A:3158 , HOH A:3191 , SO4 B:614	BINDING SITE FOR RESIDUE GOL A 420
16	BC7	SOFTWARE	PHE A:323 , ARG A:324 , GLY A:325 , TYR B:282 , GLN B:284 , GAL B:1401	BINDING SITE FOR RESIDUE 2NA B 101
17	BC8	SOFTWARE	TRP B:310 , GLY B:311 , GLU B:313 , ASP B:314 , NAG B:1400 , HOH B:3169 , HOH B:3188	BINDING SITE FOR RESIDUE GOL B 414
18	BC9	SOFTWARE	SER A:327 , ILE A:328 , PHE B:318 , SER B:327 , ILE B:328	BINDING SITE FOR RESIDUE GOL B 415
19	CC1	SOFTWARE	SER A:368 , ASP A:369 , PHE B:184 , ARG B:185 , ASN B:186 , ASN B:215	BINDING SITE FOR RESIDUE GOL B 416
20	CC2	SOFTWARE	ASN B:306 , TRP B:308 , ARG B:358 , PRO B:397 , SER B:398	BINDING SITE FOR RESIDUE GOL B 419
21	CC3	SOFTWARE	GLU B:144 , PHE B:145 , ASN B:146 , ARG B:339 , ARG B:342	BINDING SITE FOR RESIDUE SO4 B 601
22	CC4	SOFTWARE	ASN B:160 , TYR B:167 , PRO B:169 , ARG B:170 , HOH B:3172 , HOH B:3189 , HOH B:3286 , HOH B:3443	BINDING SITE FOR RESIDUE SO4 B 603
23	CC5	SOFTWARE	HIS B:343 , SER B:344 , HOH B:3246	BINDING SITE FOR RESIDUE SO4 B 605
24	CC6	SOFTWARE	ASP B:150 , LEU B:151 , GLU B:152	BINDING SITE FOR RESIDUE SO4 B 606
25	CC7	SOFTWARE	SER B:344 , ARG B:345 , UDH B:1399	BINDING SITE FOR RESIDUE SO4 B 611
26	CC8	SOFTWARE	ARG B:267 , HOH B:3258	BINDING SITE FOR RESIDUE SO4 B 613
27	CC9	SOFTWARE	GLY A:395 , THR A:396 , GOL A:420 , LYS B:348 , HOH B:3430	BINDING SITE FOR RESIDUE SO4 B 614
28	DC1	SOFTWARE	ASP B:250 , HIS B:340 , HIS B:343 , UDH B:1399 , HOH B:3155	BINDING SITE FOR RESIDUE MN B 400
29	DC2	SOFTWARE	PRO C:183 , PHE C:184 , ARG C:185 , ARG C:187 , PHE C:222 , ASP C:248 , VAL C:249 , ASP C:250 , LYS C:275 , TRP C:310 , HIS C:340 , HIS C:343 , ARG C:345 , ASP C:346 , MN C:400 , GOL C:418 , HOH C:3275 , HOH C:3281 , HOH C:3389 , HOH C:3429	BINDING SITE FOR RESIDUE UDH C2399
30	DC3	SOFTWARE	PHE C:276 , TYR C:282 , TYR C:285 , TRP C:310 , GLY C:311 , GLY C:312 , ASP C:314 , ASP C:315 , ARG C:355 , GOL C:418 , GAL C:2401 , HOH C:3474	BINDING SITE FOR RESIDUE NAG C2400
31	DC4	SOFTWARE	2NA C:102 , TYR C:282 , NAG C:2400 , HOH C:3397 , HOH C:3474	BINDING SITE FOR RESIDUE GAL C2401
32	DC5	SOFTWARE	TYR C:282 , GLN C:284 , PHE C:323 , ARG C:324 , GLY C:325 , GAL C:2401	BINDING SITE FOR RESIDUE 2NA C 102
33	DC6	SOFTWARE	ARG C:224 , ASP C:248 , GLY C:288 , TRP C:310 , GLY C:311 , GLU C:313 , ASP C:314 , UDH C:2399 , NAG C:2400 , HOH C:3471	BINDING SITE FOR RESIDUE GOL C 418
34	DC7	SOFTWARE	TRP C:308 , ARG C:358 , PRO C:397 , SER C:398	BINDING SITE FOR RESIDUE DIO C 435
35	DC8	SOFTWARE	LYS C:237 , LEU C:374 , THR C:375 , TYR C:376 , GLN C:377 , VAL C:378 , HOH C:3358 , HOH C:3472	BINDING SITE FOR RESIDUE MES C 436
36	DC9	SOFTWARE	GLU C:144 , PHE C:145 , ASN C:146 , ARG C:339	BINDING SITE FOR RESIDUE SO4 C 608
37	EC1	SOFTWARE	HIS C:343 , SER C:344	BINDING SITE FOR RESIDUE SO4 C 612
38	EC2	SOFTWARE	ASP C:250 , HIS C:340 , HIS C:343 , UDH C:2399 , HOH C:3275	BINDING SITE FOR RESIDUE MN C 400

SS Bonds (6, 6)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 3)

PROSITE Motifs (0, 0)

Exons (6, 18)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:273
 aligned with B4GT1_HUMAN | P15291 from UniProtKB/Swiss-Prot  Length:398

    Alignment length:273
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395   
          B4GT1_HUMAN   126 SLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
               SCOP domains d3ee5a_ A: automated matches                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 3ee5A00 A:126-398 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A                                                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................hhhhhhhhh.......ee.........eeeeeeee..hhhhhhhhhhhhhhhhhhh..eeeeeeeee......hhhhhhhhhhhhhhhhh...eeeee...eee.............ee...ee.hhh...........eeeeehhhhhhh...........hhhhhhhhhhhhh............eeee.............hhhhhhhhhhhhh...hhhhh..eeeeeee....eeeeee..... Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------R--------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1     ------------------------------------------------------------------------------Exon 1.3  PDB: A:217-279 UniProt: 217-279                      ----------------------------------------Exon 1.5  PDB: A:320-355            ------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ------------Exon 1.2  PDB: A:138-216 UniProt: 138-216                                      --------------------------------------------------------------Exon 1.4  PDB: A:279-320 UniProt: 279-320 ----------------------------------Exon 1.6  PDB: A:355-398 UniProt: 355-398    Transcript 1 (2)
                 3ee5 A 126 SLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395

Chain B from PDB  Type:PROTEIN  Length:273
 aligned with B4GT1_HUMAN | P15291 from UniProtKB/Swiss-Prot  Length:398

    Alignment length:273
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395   
          B4GT1_HUMAN   126 SLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
               SCOP domains d3ee5b_ B: automated matches                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 3ee5B00 B:126-398 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A                                                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................hhhhhhhhh.......ee.........eeeeeeee..hhhhhhhhhhhhhhhhhhh..eeeeeeeee......hhhhhhhhhhhhhhh.....eeeee...eee.............ee...ee.hhh...........eeeeehhhhhhh...........hhhhhhhhhhhhh............eeee.............hhhhhhhhhhhhh...hhhhh..eeeeeee....eeeeee..... Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------R--------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1     ------------------------------------------------------------------------------Exon 1.3  PDB: B:217-279 UniProt: 217-279                      ----------------------------------------Exon 1.5  PDB: B:320-355            ------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ------------Exon 1.2  PDB: B:138-216 UniProt: 138-216                                      --------------------------------------------------------------Exon 1.4  PDB: B:279-320 UniProt: 279-320 ----------------------------------Exon 1.6  PDB: B:355-398 UniProt: 355-398    Transcript 1 (2)
                 3ee5 B 126 SLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395

Chain C from PDB  Type:PROTEIN  Length:273
 aligned with B4GT1_HUMAN | P15291 from UniProtKB/Swiss-Prot  Length:398

    Alignment length:273
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395   
          B4GT1_HUMAN   126 SLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
               SCOP domains d3ee5c_ C: automated matches                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 3ee5C00 C:126-398 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A                                                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........................hhhhhhhhh.......ee.........eeeeeeee..hhhhhhhhhhhhhhhhhhh..eeeeeeeee......hhhhhhhhhhhhhh......eeeee...eee.............ee...ee.hhh...........eeeeehhhhhhh...........hhhhhhhhhhhhh............eeee.............hhhhhhhhhhhhhhhhhhhhh..eeeeeee....eeeeee..... Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------R--------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1     ------------------------------------------------------------------------------Exon 1.3  PDB: C:217-279 UniProt: 217-279                      ----------------------------------------Exon 1.5  PDB: C:320-355            ------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ------------Exon 1.2  PDB: C:138-216 UniProt: 138-216                                      --------------------------------------------------------------Exon 1.4  PDB: C:279-320 UniProt: 279-320 ----------------------------------Exon 1.6  PDB: C:355-398 UniProt: 355-398    Transcript 1 (2)
                 3ee5 C 126 SLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 3)

CATH Domains (1, 3)

Pfam Domains (0, 0)

Gene Ontology (60, 60)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (B4GT1_HUMAN | P15291)

molecular function
	GO:0003945	N-acetyllactosamine synthase activity	Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine.
	GO:0035250	UDP-galactosyltransferase activity	Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.
	GO:0043014	alpha-tubulin binding	Interacting selectively and non-covalently with the microtubule constituent protein alpha-tubulin.
	GO:0003831	beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity	Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminylglycopeptide.
	GO:0048487	beta-tubulin binding	Interacting selectively and non-covalently with the microtubule constituent protein beta-tubulin.
	GO:0008092	cytoskeletal protein binding	Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).
	GO:0008378	galactosyltransferase activity	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid.
	GO:0004461	lactose synthase activity	Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose.
	GO:0030145	manganese ion binding	Interacting selectively and non-covalently with manganese (Mn) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
	GO:0019901	protein kinase binding	Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016757	transferase activity, transferring glycosyl groups	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
biological process
	GO:0002526	acute inflammatory response	Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response.
	GO:0060055	angiogenesis involved in wound healing	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury.
	GO:0007339	binding of sperm to zona pellucida	The process in which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place.
	GO:0048754	branching morphogenesis of an epithelial tube	The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0045136	development of secondary sexual characteristics	The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion.
	GO:0002064	epithelial cell development	The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.
	GO:0030198	extracellular matrix organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
	GO:0006012	galactose metabolic process	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
	GO:0009101	glycoprotein biosynthetic process	The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.
	GO:0018146	keratan sulfate biosynthetic process	The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.
	GO:0005989	lactose biosynthetic process	The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose.
	GO:0050900	leukocyte migration	The movement of a leukocyte within or between different tissues and organs of the body.
	GO:0030879	mammary gland development	The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk. Its development starts with the formation of the mammary line and ends as the mature gland cycles between nursing and weaning stages.
	GO:0008285	negative regulation of cell proliferation	Any process that stops, prevents or reduces the rate or extent of cell proliferation.
	GO:0009312	oligosaccharide biosynthetic process	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
	GO:0007341	penetration of zona pellucida	The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.
	GO:0043065	positive regulation of apoptotic process	Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
	GO:0060058	positive regulation of apoptotic process involved in mammary gland involution	Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process of mammary epithelial cells during mammary gland involution.
	GO:0060054	positive regulation of epithelial cell proliferation involved in wound healing	Any process that activates or increases the rate or extent of epithelial cell proliferation, contributing to the restoration of integrity to a damaged tissue following an injury.
	GO:0006487	protein N-linked glycosylation	A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.
	GO:0006486	protein glycosylation	A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
	GO:0060046	regulation of acrosome reaction	Any process that modulates the frequency, rate or extent of the acrosome reaction.
	GO:0042127	regulation of cell proliferation	Any process that modulates the frequency, rate or extent of cell proliferation.
	GO:0051270	regulation of cellular component movement	Any process that modulates the frequency, rate or extent of the movement of a cellular component.
	GO:0009611	response to wounding	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
	GO:0042060	wound healing	The series of events that restore integrity to a damaged tissue, following an injury.
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0032580	Golgi cisterna membrane	The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.
	GO:0000139	Golgi membrane	The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
	GO:0000138	Golgi trans cisterna	The Golgi cisterna farthest from the endoplasmic reticulum; the final processing compartment through which proteins pass before exiting the Golgi apparatus; the compartment in which N-linked protein glycosylation is completed.
	GO:0016323	basolateral plasma membrane	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
	GO:0031526	brush border membrane	The portion of the plasma membrane surrounding the brush border.
	GO:0042995	cell projection	A prolongation or process extending from a cell, e.g. a flagellum or axon.
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0030057	desmosome	A cell-cell junction in which: on the cytoplasmic surface of each interacting plasma membrane is a dense plaque composed of a mixture of intracellular anchor proteins; a bundle of keratin intermediate filaments is attached to the surface of each plaque; transmembrane adhesion proteins of the cadherin family bind to the plaques and interact through their extracellular domains to hold the adjacent membranes together by a Ca2+-dependent mechanism.
	GO:0009897	external side of plasma membrane	The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0030175	filopodium	Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
	GO:0030112	glycocalyx	A viscous, carbohydrate rich layer at the outermost periphery of a cell.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (9, 38)

Sites (38, 38)

SS Bonds (6, 6)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File