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(-) Description

Title :  IRON RECONSTITUTED FERRIC BINDING PROTEIN FROM CAMPYLOBACTER JEJUNI
 
Authors :  M. E. P. Murphy, S. A. L. Tom-Yew, E. G. Bekker
Date :  01 Aug 08  (Deposition) - 11 Aug 09  (Release) - 11 Aug 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  X
Keywords :  Beta Sheet Surrounded By Alpha Helices, Anti-Parallel Beta Sheet Containing Hinge Region, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. A. L. Tom-Yew, B. H. Shilton, E. G. Bekker, E. C. Gaynor, M. E. P. Murphy
Small Hinge Motion By The Anion-Independent Ferric Binding Protein From Campylobacter Jejuni
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE IRON-UPTAKE ABC TRANSPORT SYSTEM, PERIPLASMIC IRON-BINDING PROTEIN
    Chains: X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: HMS174(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: CFBPA, CJ0175C
    Organism Scientific: CAMPYLOBACTER JEJUNI
    Organism Taxid: 197
    Strain: NCTC 11168

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : X

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1FE1Ligand/IonFE (III) ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS X:14 , TYR X:15 , TYR X:146 , TYR X:202 , TYR X:203BINDING SITE FOR RESIDUE FE X 326

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3E13)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3E13)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3E13)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3E13)

(-) Exons   (0, 0)

(no "Exon" information available for 3E13)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain X from PDB  Type:PROTEIN  Length:317
 aligned with Q0PBW4_CAMJE | Q0PBW4 from UniProtKB/TrEMBL  Length:334

    Alignment length:317
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       
         Q0PBW4_CAMJE    18 SELNIYSARHYNADFEIIKKFEEKTGIKVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATAPYSKTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR 334
               SCOP domains d3e13x_ X: Ferric-binding protein FbpA                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 3e13X01 X:5-105,X:238-284 Periplasmic binding protein-like II                                        ------------------------------------------------------------------------------------------------------------------------------------3e13X01 X:5-105,X:238-284                      ------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....hhhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhh..ee...hhhhhhhhhhhhh......eeeeeeeeeeeee...........hhhhhhhhhhh..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhh....eeeeehhhhhhhhh..hhhhhhhhhheeee..........eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhh...ee.......hhhhhhhh.......hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e13 X   5 SELNIYSARHYNADFEIIKKFEEKTGIKVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATAPYSKTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR 321
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3E13)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain X   (Q0PBW4_CAMJE | Q0PBW4)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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  3e13
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q0PBW4_CAMJE | Q0PBW4: 1y4t

(-) Related Entries Specified in the PDB File

1y4t RECOMBINANT HOLO FBPA PROTEIN FROM CAMPYLOBACTER JEJUNI, AS ISOLATED FROM E. COLI