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(-) Description

Title :  CRYSTAL STRUCTURE OF PRECORRIN-6Y C5,15-METHYLTRANSFERASE FROM GEOBACTER METALLIREDUCENS GS-15
 
Authors :  Y. Patskovsky, U. A. Ramagopal, R. Toro, M. Dickey, S. Hu, M. Maletic, J. S. K. Burley, S. C. Almo, New York Sgx Research Center For Struct Genomics (Nysgxrc)
Date :  30 Jul 08  (Deposition) - 12 Aug 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,D,E,G  (1x)
Biol. Unit 2:  B,C,F,H  (1x)
Keywords :  Porphyrin Metabolism, S-Adenosyl-Methionine, Structural Genomics, Protein Structure Initiative, Psi, New York Structural Genomix Research Consortium, Nysgxrc, Methyltransferase, Decarboxylase, Transferase, New York Sgx Research Center For Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Patskovsky, U. A. Ramagopal, R. Toro, M. Dickey, S. Hu, M. Maletic, J. M. Sauder, S. K. Burley, S. C. Almo
Crystal Structure Of Precorrin-6Y C5, 15-Methyltransferase From Geobacter Metallireducens
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PRECORRIN-6Y C5,15-METHYLTRANSFERASE (DECARBOXYLATING)
    Chains: A, B, C, D, E, F, G, H
    EC Number: 2.1.1.132
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: C-TERMINAL DOMAIN, RESIDUES 211-405
    Gene: GMET_0481
    Organism Scientific: GEOBACTER METALLIREDUCENS
    Organism Taxid: 269799
    Strain: GS-15

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): A  DE G 
Biological Unit 2 (1x):  BC  F H

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric Unit (2, 10)
No.NameCountTypeFull Name
1CL8Ligand/IonCHLORIDE ION
2GOL2Ligand/IonGLYCEROL
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GOL1Ligand/IonGLYCEROL
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GOL1Ligand/IonGLYCEROL

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREILE A:231 , THR A:232 , ALA A:257 , SER A:259 , SER A:261BINDING SITE FOR RESIDUE CL A 1
02AC2SOFTWARETHR B:232 , SER B:259 , ALA B:260 , SER B:261 , HOH B:480BINDING SITE FOR RESIDUE CL B 1
03AC3SOFTWARETHR C:232 , SER C:259 , SER C:261 , HOH C:472BINDING SITE FOR RESIDUE CL C 1
04AC4SOFTWARETHR D:232 , SER D:259 , ALA D:260 , SER D:261BINDING SITE FOR RESIDUE CL D 1
05AC5SOFTWAREALA E:257 , SER E:259 , ALA E:260 , SER E:261BINDING SITE FOR RESIDUE CL E 1
06AC6SOFTWARETHR F:232 , ALA F:257 , SER F:259 , SER F:261 , HOH F:452BINDING SITE FOR RESIDUE CL F 1
07AC7SOFTWARETHR G:232 , SER G:259 , SER G:261BINDING SITE FOR RESIDUE CL G 1
08AC8SOFTWAREILE H:231 , THR H:232 , SER H:259 , SER H:261BINDING SITE FOR RESIDUE CL H 1
09AC9SOFTWAREGLY A:324 , SER A:325 , THR A:352 , THR A:355 , HOH A:455BINDING SITE FOR RESIDUE GOL A 413
10BC1SOFTWARELYS B:379 , THR B:380 , LYS B:381 , GLU B:390 , HIS B:392BINDING SITE FOR RESIDUE GOL B 413

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3E05)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Ala A:307 -Pro A:308
2Ala B:307 -Pro B:308
3Ala C:307 -Pro C:308
4Ala D:307 -Pro D:308
5Ala E:307 -Pro E:308
6Ala F:307 -Pro F:308
7Ala G:307 -Pro G:308
8Ala H:307 -Pro H:308

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3E05)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3E05)

(-) Exons   (0, 0)

(no "Exon" information available for 3E05)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:188
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:191
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402 
         Q39YF0_GEOMG   213 QYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
               SCOP domains d3e05a_ A: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh...eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeeee.---.....ee...eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e05 A 213 QYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTK---EYKMFESHNPVYIITAWKS 403
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372        |-  |    392       402 
                                                                                                                                                                                                  381 385                  


Chain B from PDB  Type:PROTEIN  Length:192
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:192
                                   221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401  
         Q39YF0_GEOMG   212 AQYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
               SCOP domains d3e05b_ B: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh...eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeee..........ee...eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e05 B 212 AQYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
                                   221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401  


Chain C from PDB  Type:PROTEIN  Length:190
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:191
                                   221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401 
         Q39YF0_GEOMG   212 AQYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWK 402
               SCOP domains d3e05c_ C: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh...eeeee.....hhhhh....eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeee...-......ee...eeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e05 C 212 AQYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKG-TEYKMFESHNPVYIITAWK 402
                                   221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381| |    391       401 
                                                                                                                                                                                                    382 |                  
                                                                                                                                                                                                      384                  


Chain D from PDB  Type:PROTEIN  Length:192
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:192
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403  
         Q39YF0_GEOMG   214 YPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKSDE 405
               SCOP domains d3e05d_ D: automated matches                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhh....eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeeeee......eeee...eeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e05 D 214 YPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKSDE 405
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403  


Chain E from PDB  Type:PROTEIN  Length:191
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:191
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402 
         Q39YF0_GEOMG   213 QYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
               SCOP domains d3e05e_ E: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh...eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeee..........ee...eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e05 E 213 QYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402 


Chain F from PDB  Type:PROTEIN  Length:187
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:191
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402 
         Q39YF0_GEOMG   213 QYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
               SCOP domains d3e05f_ F: automated matches                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhh....eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeee...----...ee...eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e05 F 213 QYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKG----KMFESHNPVYIITAWKS 403
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382    |  392       402 
                                                                                                                                                                                                   382  387                


Chain G from PDB  Type:PROTEIN  Length:189
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:189
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393         
         Q39YF0_GEOMG   214 YPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWK 402
               SCOP domains d3e05g_ G: automated matches                                                                                                                                                                  SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh...eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeee..........ee...eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e05 G 214 YPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWK 402
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393         


Chain H from PDB  Type:PROTEIN  Length:191
 aligned with Q39YF0_GEOMG | Q39YF0 from UniProtKB/TrEMBL  Length:405

    Alignment length:193
                                   220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400   
         Q39YF0_GEOMG   211 LAQYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAWKS 403
               SCOP domains d3e05h_ H: automated matches                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh........hhhhhhhhhhhh......eeeee....hhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhh....eeeee..............eeee.....hhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhh..eeeeeeeeeee...--.....ee...eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e05 H 211 LAQYPVIGIDDDEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVACVNVAKTKG--EYKMFESHNPVYIITAWKS 403
                                   220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380 |  |  390       400   
                                                                                                                                                                                                     382  |                  
                                                                                                                                                                                                        385
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3E05)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3E05)

(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (Q39YF0_GEOMG | Q39YF0)
molecular function
    GO:0008168    methyltransferase activity    Catalysis of the transfer of a methyl group to an acceptor molecule.
    GO:0008276    protein methyltransferase activity    Catalysis of the transfer of a methyl group (CH3-) to a protein.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0009236    cobalamin biosynthetic process    The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0032259    methylation    The process in which a methyl group is covalently attached to a molecule.
    GO:0006479    protein methylation    The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.

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  3e05
    Family and Domain Information: ProDom | SYSTERS
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  Q39YF0_GEOMG | Q39YF0
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