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Summary Information (see also Sequences/Alignments below) |
Asymmetric/Biological Unit (3, 3) |
Asymmetric Unit (3, 3)
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(no "SS Bond" information available for 3DST) |
Asymmetric/Biological Unit
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(no "SAP(SNP)/Variant" information available for 3DST) |
Asymmetric/Biological Unit (1, 6) |
Asymmetric/Biological UnitChain A from PDB Type:PROTEIN Length:311 aligned with PGTA_RAT | Q08602 from UniProtKB/Swiss-Prot Length:567 Alignment length:428 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403 413 423 433 PGTA_RAT 14 AEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYA 441 SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------PFTA PDB: A:44-78 UniProt: 44-78 ---------PFTA PDB: A:88-122 UniProt: 88-122-PFTA PDB: A:124-158 PFTA PDB: A:159-193 -------------PFTA PDB: A:207-237 -------------------------------------------------------------------------------------------------------------------------PFTA PDB: A:252-286 -------------------------------------------- PROSITE Transcript 1 (1) Exon 1.3 PDB: A:14-38 Exon 1.4 PDB: A:39-80 UniProt: 39-80 --------------------------------------------------------------Exon 1.6 PDB: A:143-211 (gaps) UniProt: 143-211 ---------------------------Exon 1.8 PDB: - Exon 1.9 PDB: - UniProt: 267-300 Exon 1.10 PDB: A:238-241 ----------------Exon 1.12 PDB: A:242-272 -----------------------------Exon 1.14 PDB: A:302-330 Transcript 1 (1) Transcript 1 (2) ------------------------------------------------------------------Exon 1.5 PDB: A:80-143 UniProt: 80-143 -------------------------------------------------------------------Exon 1.7 PDB: A:211-237 ------------------------------------------------------------------------------------------------Exon 1.11 -----------------------------Exon 1.13 PDB: A:272-301 ----------------------------- Transcript 1 (2) 3dst A 14 AEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQP------RLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLG-------------------------------------------------------------------------------------AGSG--------------------------RCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYA 330 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 | 203 213 223 233 | - - - - - - - - 238 | - - 242 252 262 272 282 292 302 312 322 195 202 237 238 | 242 241 Chain B from PDB Type:PROTEIN Length:325 aligned with PGTB2_RAT | Q08603 from UniProtKB/Swiss-Prot Length:331 Alignment length:327 14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 PGTB2_RAT 5 QKDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPEEVLQRVNVQPELVS 331 SCOP domains d3dstb_ B: Rab geranylgeranyl transferase, beta subunit SCOP domains CATH domains 3dstB00 B:5-331 [code=1.50.1 0.20, no name defined] CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 3dst B 5 QKDVTIKSDAPDTLLLEKHADYIASYGSK--DYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPEEVLQRVNVQPELVS 331 14 24 |- | 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 33 36
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Asymmetric/Biological Unit |
Asymmetric/Biological Unit
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(no "Pfam Domain" information available for 3DST) |
Asymmetric/Biological Unit(hide GO term definitions) Chain A (PGTA_RAT | Q08602)
Chain B (PGTB2_RAT | Q08603)
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