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(-) Description

Title :  CRYSTAL STRUCTURE OF UPF0317 PROTEIN ATU3911 FROM AGROBACTERIUM TUMEFACIENS. NORTHEAST STRCUTURAL GENOMICS TARGET ATR186
 
Authors :  J. Seetharaman, M. Abashidze, D. Wang, H. Janjua, L. Owens, R. Xiao, J. Liu, M. C. Baran, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (Nesg)
Date :  30 May 08  (Deposition) - 29 Jul 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  A  (1x)
Keywords :  Belongs To The Upf0317 Family, Agrobacterium Tumefaciens, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Seetharaman, M. Abashidze, D. Wang, H. Janjua, L. Owens, R. Xiao, J. Liu, M. C. Baran, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of Upf0317 Protein Atu3911 From Agrobacterium Tumefaciens. Northeast Strcutural Genomics Target Atr186 (Casp Target)
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UPF0317 PROTEIN ATU3911
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Vector Type: PLASMID
    Gene: ATU3911, AGR_L_1868
    Organism Scientific: AGROBACTERIUM TUMEFACIENS STR. C58
    Organism Taxid: 176299
    Strain: AGROBACTERIUM TUMEFACIENS (STRAIN C58 / ATCC 33970

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A
Biological Unit 2 (1x): A

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:235
 aligned with Y3911_AGRFC | Q8U919 from UniProtKB/Swiss-Prot  Length:269

    Alignment length:256
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260      
          Y3911_AGRFC    11 TDAEAARKARATYRDGLVAPTSGIAPGFTQANMIVLPRDWAFDFLLYAQRNPKPCPVLDVSDPGSPTTLLAPGADLRTDLPLYRIWRDGKLAEETADATSAWAERDDLVAFLIGCSFTFETPMVEAGIEIRHMTDKSNVPMYLTNRPCRPAGRLKGNMVVSMRPIPASRVADAATISGRFPAVHGAPVHVGAPEQIGISDLSKPDFGDAVRIEPGEVPVFWACGVTPQAAVMASGVPFAITHAPGHMFITDIPDTA 266
               SCOP domains d3db9a_ A: automated matches                                                                                                                                                                                                                                     SCOP domains
               CATH domains 3db9A01 A:11-124,A:243-266 PSTPO5379-like                                                                               3db9A02         A:131-242 PSTPO5379-like domain                                                                 3db9A01 PSTPO5379-like   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhh...........eeee.eeeehhhhhhhhhhhhhhh.......ee......................eeeee..eeee....hhhhhh.....eeee..------........--------....eeeeeee.........eeeeeeeeee...hhhhhhhhhh-------..ee.hhhhhh..................eeeeeee.hhhhhhhhhhh...eeeee.....eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3db9 A  11 TDAEAARKARATYRDGLVAPTSGIAPGFTQANMIVLPRDWAFDFLLYAQRNPKPCPVLDVSDPGSPTTLLAPGADLRTDLPLYRIWRDGKLAEETADATSAWAERDDLVAFLIG------TPMVEAGI--------SNVPMYLTNRPCRPAGRLKGNMVVSMRPIPASRVADAATISGR-------PVHVGAPEQIGISDLSKPDFGDAVRIEPGEVPVFWACGVTPQAAVMASGVPFAITHAPGHMFITDIPDTA 266
                                    20        30        40        50        60        70        80        90       100       110       120   |     -|      | -      |150       160       170       180        |-      |200       210       220       230       240       250       260      
                                                                                                                                           124    131    138      147                                       189     197
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

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2pif 79% HOMOLOGY OF 2PIF