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Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

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Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF DOMAIN-SWAPPED OSR1 KINASE DOMAIN

Authors :   S Lee, M. H. Cobb, E. J. Goldsmith

Date :   29 May 08 (Deposition) - 10 Feb 09 (Release) - 10 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.25

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D  (1x)
Biol. Unit 2: A,D  (1x)
Biol. Unit 3: B,C  (1x)

Keywords :   Serine/Threonine Protein Kinase, Ste20, Domain-Swapping, Atp-Binding, Kinase, Magnesium, Metal-Binding, Nucleotide- Binding, Phosphoprotein, Polymorphism, Serine/Threonine- Protein Kinase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. J. Lee, M. H. Cobb, E. J. Goldsmith
Crystal Structure Of Domain-Swapped Ste20 Osr1 Kinase Domain.
Protein Sci. V. 18 304 2008
PubMed-ID: 19177573 | Reference-DOI: 10.1002/PRO.27
(for further references see the PDB file header)

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE OSR1
	Chains	:	A, B, C, D
	EC Number	:	2.7.11.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PHIS-PARALLEL VECTOR
	Expression System Strain	:	ROSETTA2(DE3)
	Expression System Vector Type	:	PLASMID
	Fragment	:	PROTEIN KINASE DOMAIN, UNP RESIDUES 6-295
	Gene	:	OXSR1, KIAA1101, OSR1
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Strain	:	1-295
	Synonym	:	OXIDATIVE STRESS-RESPONSIVE 1 PROTEIN

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B	C	D
Biological Unit 2 (1x)	:	A			D
Biological Unit 3 (1x)	:		B	C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 8)

No.	Name	Count	Type	Full Name
1	ANP	4	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	4	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (1, 4)

No.	Name	Count	Type	Full Name
1	ANP	4	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	ANP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 3 (1, 2)

No.	Name	Count	Type	Full Name
1	ANP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:234 , ILE C:23 , VAL C:31 , LYS C:46 , MET C:92 , LYS C:93 , LEU C:95 , ASP C:146 , ASN C:151 , LEU C:153 , ASP C:164 , MG C:296 , HOH C:302 , HOH C:348 , HOH C:461 , HOH C:537	BINDING SITE FOR RESIDUE ANP C 1
2	AC2	SOFTWARE	ILE B:23 , VAL B:31 , LYS B:46 , VAL B:76 , MET B:92 , LYS B:93 , LEU B:95 , LYS B:148 , ASN B:151 , LEU B:153 , ASP B:164 , MG B:296 , HOH B:351 , HOH B:558 , HOH B:668	BINDING SITE FOR RESIDUE ANP B 1
3	AC3	SOFTWARE	LYS B:234 , ILE D:23 , VAL D:31 , LYS D:46 , MET D:92 , LYS D:93 , LEU D:95 , LEU D:153 , ASP D:164 , MG D:296 , HOH D:307 , HOH D:627 , HOH D:646 , HOH D:649	BINDING SITE FOR RESIDUE ANP D 1
4	AC4	SOFTWARE	ILE A:23 , GLY A:24 , SER A:25 , VAL A:31 , LYS A:46 , VAL A:76 , LYS A:93 , LEU A:95 , ASP A:146 , ASN A:151 , ASP A:164 , MG A:296 , HOH A:300 , HOH A:349 , HOH A:370 , HOH A:378 , HOH A:630 , HOH A:633 , HOH A:656	BINDING SITE FOR RESIDUE ANP A 1
5	AC5	SOFTWARE	ANP A:1 , GLY A:150 , ASN A:151	BINDING SITE FOR RESIDUE MG A 296
6	AC6	SOFTWARE	ANP B:1 , GLY B:150 , ASN B:151	BINDING SITE FOR RESIDUE MG B 296
7	AC7	SOFTWARE	ANP C:1 , GLY C:150 , ASN C:151	BINDING SITE FOR RESIDUE MG C 296
8	AC8	SOFTWARE	ANP D:1 , ASN D:151 , ASP D:164	BINDING SITE FOR RESIDUE MG D 296

(no "SS Bond" information available for 3DAK)

Asymmetric Unit

No.	Residues
1	Ala B:27	-	Thr B:28
2	Thr C:185	-	Phe C:186

(no "SAP(SNP)/Variant" information available for 3DAK)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	OXSR1_HUMAN	23-46	4	A:23-46 B:23-46 C:23-46 D:23-46

Biological Unit 1 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	OXSR1_HUMAN	23-46	4	A:23-46 B:23-46 C:23-46 D:23-46

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	OXSR1_HUMAN	23-46	2	A:23-46 - - D:23-46

Biological Unit 3 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	OXSR1_HUMAN	23-46	2	- B:23-46 C:23-46 -

Asymmetric Unit (9, 36)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1b	ENST00000311806	1b	ENSE00001732922	chr3:38206996-38207437	442	OXSR1_HUMAN	1-24	24	4	A:6-24 B:6-24 C:7-24 D:7-24	19 19 18 18
1.2b	ENST00000311806	2b	ENSE00001290268	chr3:38224494-38224606	113	OXSR1_HUMAN	24-61	38	4	A:24-61 B:24-61 C:24-61 D:24-61	38 38 38 38
1.3	ENST00000311806	3	ENSE00001307124	chr3:38232222-38232330	109	OXSR1_HUMAN	62-98	37	4	A:62-98 B:62-98 C:62-98 D:62-98	37 37 37 37
1.5	ENST00000311806	5	ENSE00001676223	chr3:38240213-38240354	142	OXSR1_HUMAN	98-145	48	4	A:98-145 B:98-145 C:98-145 D:98-145	48 48 48 48
1.6b	ENST00000311806	6b	ENSE00001665291	chr3:38257587-38257642	56	OXSR1_HUMAN	145-164	20	4	A:145-164 B:145-164 C:145-164 D:145-164	20 20 20 20
1.7	ENST00000311806	7	ENSE00001656407	chr3:38263069-38263178	110	OXSR1_HUMAN	164-200	37	4	A:164-200 (gaps) B:164-200 (gaps) C:164-200 (gaps) D:164-200 (gaps)	37 37 37 37
1.8	ENST00000311806	8	ENSE00001690793	chr3:38265303-38265404	102	OXSR1_HUMAN	201-234	34	4	A:201-234 B:201-234 C:201-234 D:201-234	34 34 34 34
1.9a	ENST00000311806	9a	ENSE00001598926	chr3:38266062-38266195	134	OXSR1_HUMAN	235-279	45	4	A:235-279 B:235-279 C:235-279 D:235-279	45 45 45 45
1.10	ENST00000311806	10	ENSE00001684759	chr3:38271178-38271226	49	OXSR1_HUMAN	279-295	17	4	A:279-295 B:279-295 C:279-295 D:279-295	17 17 17 17
1.11a	ENST00000311806	11a	ENSE00001326005	chr3:38271856-38271921	66	OXSR1_HUMAN	296-317	22	0	-	-
1.12b	ENST00000311806	12b	ENSE00001304209	chr3:38278330-38278452	123	OXSR1_HUMAN	318-358	41	0	-	-
1.13	ENST00000311806	13	ENSE00001321785	chr3:38284234-38284269	36	OXSR1_HUMAN	359-370	12	0	-	-
1.14	ENST00000311806	14	ENSE00001298456	chr3:38287566-38287712	147	OXSR1_HUMAN	371-419	49	0	-	-
1.15	ENST00000311806	15	ENSE00001318375	chr3:38289159-38289223	65	OXSR1_HUMAN	420-441	22	0	-	-
1.16a	ENST00000311806	16a	ENSE00001294609	chr3:38291457-38291509	53	OXSR1_HUMAN	441-459	19	0	-	-
1.17b	ENST00000311806	17b	ENSE00001295015	chr3:38292894-38292962	69	OXSR1_HUMAN	459-482	24	0	-	-
1.18	ENST00000311806	18	ENSE00001316420	chr3:38293819-38293883	65	OXSR1_HUMAN	482-503	22	0	-	-
1.19	ENST00000311806	19	ENSE00001224474	chr3:38294308-38296979	2672	OXSR1_HUMAN	504-527	24	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:279
 aligned with OXSR1_HUMAN | O95747 from UniProtKB/Swiss-Prot  Length:527

    Alignment length:290
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295
          OXSR1_HUMAN     6 SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
               SCOP domains d3daka_ A: automated matches                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhh.eeeeeeee....eeeeeeee.hhheeeeeeeee......hhhhhhhhhhhhhhh.......eeeeeee..eeeeeee.....hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee...hhhhhhhh..-----------.......hhhhhhhhhh..hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..........hhhhhh..hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b          -------------------------------------Exon 1.3  PDB: A:62-98 UniProt: 62-98----------------------------------------------Exon 1.6b           ------------------------------------Exon 1.8  PDB: A:201-234          --------------------------------------------Exon 1.10         Transcript 1 (1)
           Transcript 1 (2) ------------------Exon 1.2b  PDB: A:24-61 UniProt: 24-61------------------------------------Exon 1.5  PDB: A:98-145 UniProt: 98-145         ------------------Exon 1.7  PDB: A:164-200 (gaps)      ----------------------------------Exon 1.9a  PDB: A:235-279 UniProt: 235-279   ---------------- Transcript 1 (2)
                 3dak A   6 SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG-----------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175         - |     195       205       215       225       235       245       255       265       275       285       295
                                                                                                                                                                                                   175         187

Chain B from PDB  Type:PROTEIN  Length:278
 aligned with OXSR1_HUMAN | O95747 from UniProtKB/Swiss-Prot  Length:527

    Alignment length:290
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295
          OXSR1_HUMAN     6 SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
               SCOP domains d3dakb_ B: automated matches                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhh.eeeeeeeee...eeeeeeee....eeeeeeeee......hhhhhhhhhhhhhhh.......eeeeeee..eeeeeee.....hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee...hhhhhhhh...------------.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..........hhhhhh..hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b          -------------------------------------Exon 1.3  PDB: B:62-98 UniProt: 62-98----------------------------------------------Exon 1.6b           ------------------------------------Exon 1.8  PDB: B:201-234          --------------------------------------------Exon 1.10         Transcript 1 (1)
           Transcript 1 (2) ------------------Exon 1.2b  PDB: B:24-61 UniProt: 24-61------------------------------------Exon 1.5  PDB: B:98-145 UniProt: 98-145         ------------------Exon 1.7  PDB: B:164-200 (gaps)      ----------------------------------Exon 1.9a  PDB: B:235-279 UniProt: 235-279   ---------------- Transcript 1 (2)
                 3dak B   6 SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD------------TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175|        -   |   195       205       215       225       235       245       255       265       275       285       295
                                                                                                                                                                                                    176          189

Chain C from PDB  Type:PROTEIN  Length:281
 aligned with OXSR1_HUMAN | O95747 from UniProtKB/Swiss-Prot  Length:527

    Alignment length:289
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286         
          OXSR1_HUMAN     7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
               SCOP domains d3dakc_ C: automated matches                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhh.eeeeeeeee...eeeeeeee....eeeeeeeee......hhhhhhhhhhhhhhh.......eeeeeee..eeeeeee.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee...hhhhhhhh...--------.........hhhhhhhhh...hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..................hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b         -------------------------------------Exon 1.3  PDB: C:62-98 UniProt: 62-98----------------------------------------------Exon 1.6b           ------------------------------------Exon 1.8  PDB: C:201-234          --------------------------------------------Exon 1.10         Transcript 1 (1)
           Transcript 1 (2) -----------------Exon 1.2b  PDB: C:24-61 UniProt: 24-61------------------------------------Exon 1.5  PDB: C:98-145 UniProt: 98-145         ------------------Exon 1.7  PDB: C:164-200 (gaps)      ----------------------------------Exon 1.9a  PDB: C:235-279 UniProt: 235-279   ---------------- Transcript 1 (2)
                 3dak C   7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD--------TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286         
                                                                                                                                                                                                   176      185

Chain D from PDB  Type:PROTEIN  Length:284
 aligned with OXSR1_HUMAN | O95747 from UniProtKB/Swiss-Prot  Length:527

    Alignment length:289
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286         
          OXSR1_HUMAN     7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
               SCOP domains d3dakd_ D: automated matches                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhh.eeeeeeee....eeeeeeee....eeeeeeeee......hhhhhhhhhhhhh.........eeeeeee..eeeeeee.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee...hhhhhhhhhhhhhh.-----........hhhhhhhhhh..hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..........hhhhhh..hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------PROTEIN_KINASE_ATP      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1b         -------------------------------------Exon 1.3  PDB: D:62-98 UniProt: 62-98----------------------------------------------Exon 1.6b           ------------------------------------Exon 1.8  PDB: D:201-234          --------------------------------------------Exon 1.10         Transcript 1 (1)
           Transcript 1 (2) -----------------Exon 1.2b  PDB: D:24-61 UniProt: 24-61------------------------------------Exon 1.5  PDB: D:98-145 UniProt: 98-145         ------------------Exon 1.7  PDB: D:164-200 (gaps)      ----------------------------------Exon 1.9a  PDB: D:235-279 UniProt: 235-279   ---------------- Transcript 1 (2)
                 3dak D   7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN-----FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176   |   186       196       206       216       226       236       246       256       266       276       286         
                                                                                                                                                                                                       180   186

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Protein kinase-like (PK-like) (2589)

Superfamily: Protein kinase-like (PK-like) (2589)

Family: automated matches (529)

Protein domain: automated matches (529)

Human (Homo sapiens) [TaxId: 9606] (438)

1a	d3daka_	A:
1b	d3dakb_	B:
1c	d3dakc_	C:
1d	d3dakd_	D:

(no "CATH Domain" information available for 3DAK)

(no "Pfam Domain" information available for 3DAK)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (OXSR1_HUMAN | O95747)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0004702	signal transducer, downstream of receptor, with serine/threonine kinase activity	Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0071476	cellular hypotonic response	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.
	GO:0035556	intracellular signal transduction	The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
	GO:1901380	negative regulation of potassium ion transmembrane transport	Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transport.
	GO:1901017	negative regulation of potassium ion transmembrane transporter activity	Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.
	GO:2000687	negative regulation of rubidium ion transmembrane transporter activity	Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transmembrane transporter activity.
	GO:2000681	negative regulation of rubidium ion transport	Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transport.
	GO:0018107	peptidyl-threonine phosphorylation	The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
	GO:0006979	response to oxidative stress	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
	GO:0023014	signal transduction by protein phosphorylation	A process in which the transfer of one or more phosphate groups to a substrate transmits a signal to the phosphorylated substrate.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

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(no "Related Entries Specified in the PDB File" available for 3DAK)

Description

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