Chain A from PDB Type:PROTEIN Length:138
aligned with NUSB_ECOLI | P0A780 from UniProtKB/Swiss-Prot Length:139
Alignment length:138
11 21 31 41 51 61 71 81 91 101 111 121 131
NUSB_ECOLI 2 KPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK 139
SCOP domains d3d3ca_ A: automated matches SCOP domains
CATH domains 3d3cA00 A:2-139 N-utilizing Substance Protein B Homolog; Chain A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------D------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3d3c A 2 EPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK 139
11 21 31 41 51 61 71 81 91 101 111 121 131
Chain B from PDB Type:PROTEIN Length:138
aligned with NUSB_ECOLI | P0A780 from UniProtKB/Swiss-Prot Length:139
Alignment length:138
11 21 31 41 51 61 71 81 91 101 111 121 131
NUSB_ECOLI 2 KPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK 139
SCOP domains d3d3cb_ B: automated matches SCOP domains
CATH domains 3d3cB00 B:2-139 N-utilizing Substance Protein B Homolog; Chain A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------D------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3d3c B 2 EPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK 139
11 21 31 41 51 61 71 81 91 101 111 121 131
Chain C from PDB Type:PROTEIN Length:138
aligned with NUSB_ECOLI | P0A780 from UniProtKB/Swiss-Prot Length:139
Alignment length:138
11 21 31 41 51 61 71 81 91 101 111 121 131
NUSB_ECOLI 2 KPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK 139
SCOP domains d3d3cc_ C: automated matches SCOP domains
CATH domains 3d3cC00 C:2-139 N-utilizing Substance Protein B Homolog; Chain A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh.hhhhhh......hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------D------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3d3c C 2 EPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK 139
11 21 31 41 51 61 71 81 91 101 111 121 131
Chain J from PDB Type:PROTEIN Length:85
aligned with RS10_ECOLI | P0A7R5 from UniProtKB/Swiss-Prot Length:103
Alignment length:106
1
| 7 17 27 37 47 57 67 77 87 97
RS10_ECOLI - ---MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG 103
SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeee.hhhhhhhhhhhhhhhhhhh..eeeeeeeeeee.---------------------.eeeeeeeee..hhhhhhhhhhh.....eeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------RIBOSOMAL_S10 ----------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3d3c J -2 LGSMQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRS---------------------RTHLRLVDIVEPTEKTVDDLMRLDLAAGVDVQISLG 82
7 17 27 37 |- - -| 56 66 76
46 47
Chain K from PDB Type:PROTEIN Length:87
aligned with RS10_ECOLI | P0A7R5 from UniProtKB/Swiss-Prot Length:103
Alignment length:108
1
| 5 15 25 35 45 55 65 75 85 95
RS10_ECOLI - -----MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG 103
SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhh...eeeeeeee.hhhhhhhhhhhhhhhhhhh..eeeeeeeeeee.---------------------.eeeeeeeee..hhhhhhhhhhh.....eeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------RIBOSOMAL_S10 ----------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
3d3c K -4 GPLGSMQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRS---------------------RTHLRLVDIVEPTEKTVDDLMRLDLAAGVDVQISLG 82
5 15 25 35 45| - - | 54 64 74
46 47
Chain L from PDB Type:PROTEIN Length:87
aligned with RS10_ECOLI | P0A7R5 from UniProtKB/Swiss-Prot Length:103
Alignment length:108
1
| 5 15 25 35 45 55 65 75 85 95
RS10_ECOLI - -----MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG 103
SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhh...eeeeeeee.hhhhhhhhhhhhhhhhhhh..eeeeeeee....---------------------..eeeeeeee..hhhhhhhhhh.......eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------RIBOSOMAL_S10 ----------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
3d3c L -4 GPLGSMQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRS---------------------RTHLRLVDIVEPTEKTVDDLMRLDLAAGVDVQISLG 82
5 15 25 35 45| - - | 54 64 74
46 47
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |