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(-) Description

Title :  CRYSTAL STRUCTURE OF THE Q7W7N7_BORPA PROTEIN FROM BORDETELLA PARAPERTUSSIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BER31
 
Authors :  S. M. Vorobiev, M. Abashidze, J. Seetharaman, L. Zhao, H. Janjua, R. Xiao, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structural Genomics Consortium (Nesg)
Date :  31 Mar 08  (Deposition) - 15 Apr 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Q7W7N7_borpa, Bpp2477, Ber31, Nesg, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Vorobiev, M. Abashidze, J. Seetharaman, L. Zhao, H. Janjua, T. B. Acton, G. T. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of The Q7W7N7_borpa Protein From Bordetella Parapertussis.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN Q7W7N7_BORPA
    Atcc: BAA-587
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector: SUMO
    Gene: BPP2477
    Organism Scientific: BORDETELLA PARAPERTUSSIS 12822
    Organism Taxid: 257311
    Strain: 12822 / NCTC 13253

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:118
 aligned with Q7W7N7_BORPA | Q7W7N7 from UniProtKB/TrEMBL  Length:150

    Alignment length:141
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146 
         Q7W7N7_BORPA     7 PATALNTVTAYGDGYIEVNQVRFSHAIAFAPEGPVASWPVQRPADITASLLQQAAGLAEVVRDPLAFLDEPEAGAGARPANAPEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQAAARTYNILMAEGRRVVVALLPD 147
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3cpkA00 A:7-147  [code=3.40.1230.10, no name defined]                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee..eeee..eee...eee......ee....hhhhhhhhhhhhhhh..-----------------------...eeeee........hhhhhhhhhh...eeeeehhhhhhhhhhhhhhh...eeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3cpk A   7 PATALNTVTAYGDGYIEVNQVRFSHAIAFAPEGPVASWPVQRPADITASLLQQAAGLA-----------------------APEVLLVGTGRRQHLLGPEQVRPLLAmGVGVEAmDTQAAARTYNILmAEGRRVVVALLPD 147
                                    16        26        36        46        56       | -         -         - |      96       106       116    |  126       136       146 
                                                                                    64                      88                       114-MSE  |          134-MSE         
                                                                                                                                            121-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

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