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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE ACETYLTRANSFERASE (YP_390128.1) FROM DESULFOVIBRIO DESULFURICANS G20 AT 2.28 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  13 Feb 08  (Deposition) - 26 Feb 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.28
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Yp_390128. 1, Putative Acetyltransferase, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Putative Acetyltransferase (Yp_390128. 1) From Desulfovibrio Desulfuricans G20 At 2. 28 Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE ACETYLTRANSFERASE
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YP_390128.1, DDE_3640
    Organism Scientific: DESULFOVIBRIO DESULFURICANS SUBSP. DESULFURICANS STR.
    Organism Taxid: 207559
    Strain: G20

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 81)

Asymmetric Unit (4, 81)
No.NameCountTypeFull Name
1CL12Ligand/IonCHLORIDE ION
2EDO28Ligand/Ion1,2-ETHANEDIOL
3MG1Ligand/IonMAGNESIUM ION
4MSE40Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (2, 37)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO17Ligand/Ion1,2-ETHANEDIOL
3MG-1Ligand/IonMAGNESIUM ION
4MSE20Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (2, 31)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO11Ligand/Ion1,2-ETHANEDIOL
3MG-1Ligand/IonMAGNESIUM ION
4MSE20Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (36, 36)

Asymmetric Unit (36, 36)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:32 , TYR A:39BINDING SITE FOR RESIDUE CL A 478
02AC2SOFTWAREARG C:32 , TYR C:39BINDING SITE FOR RESIDUE CL C 479
03AC3SOFTWAREPHE A:158 , ARG A:176 , TYR A:177BINDING SITE FOR RESIDUE CL A 479
04AC4SOFTWAREPHE D:158 , ARG D:176 , TYR D:177BINDING SITE FOR RESIDUE CL D 479
05AC5SOFTWAREPHE B:158 , ARG B:176 , TYR B:177BINDING SITE FOR RESIDUE CL B 478
06AC6SOFTWAREASP B:83 , ASN B:301BINDING SITE FOR RESIDUE CL B 479
07AC7SOFTWAREARG B:32BINDING SITE FOR RESIDUE CL B 480
08AC8SOFTWAREGLU C:88 , HIS C:124 , HIS C:150 , HIS C:317BINDING SITE FOR RESIDUE MG C 480
09AC9SOFTWAREGLN D:182 , SER D:418 , ARG D:422BINDING SITE FOR RESIDUE EDO D 482
10BC1SOFTWAREGLN B:182 , ILE B:198 , SER B:418 , PHE B:419 , ARG B:422BINDING SITE FOR RESIDUE EDO B 481
11BC2SOFTWARELYS A:90 , SER A:127BINDING SITE FOR RESIDUE EDO A 481
12BC3SOFTWAREGLU A:185 , LYS A:199BINDING SITE FOR RESIDUE EDO A 482
13BC4SOFTWARETYR B:180 , GLY B:333 , PHE B:334 , PRO B:356 , PHE B:419 , ARG B:422BINDING SITE FOR RESIDUE EDO B 482
14BC5SOFTWARETHR B:183 , GLU B:185 , LYS B:199BINDING SITE FOR RESIDUE EDO B 483
15BC6SOFTWAREGLU D:185 , TRP D:197 , LYS D:199BINDING SITE FOR RESIDUE EDO D 483
16BC7SOFTWAREALA A:316 , PHE A:331 , GLY A:333 , PHE A:334 , PRO A:356 , ARG A:422BINDING SITE FOR RESIDUE EDO A 483
17BC8SOFTWAREGLN A:182 , SER A:418 , PHE A:419 , ARG A:422BINDING SITE FOR RESIDUE EDO A 484
18BC9SOFTWARESER D:40 , TYR D:43 , GLN D:458BINDING SITE FOR RESIDUE EDO D 484
19CC1SOFTWAREGLU A:205 , THR A:407 , ARG A:409BINDING SITE FOR RESIDUE EDO A 485
20CC2SOFTWARETRP A:197 , HIS A:207BINDING SITE FOR RESIDUE EDO A 486
21CC3SOFTWAREASP D:28 , ARG D:31 , ARG D:32 , SER D:225BINDING SITE FOR RESIDUE EDO D 485
22CC4SOFTWAREGLU D:205 , HIS D:207 , THR D:407 , ARG D:409BINDING SITE FOR RESIDUE EDO D 486
23CC5SOFTWAREGLU A:155 , THR A:169 , HIS A:171 , HIS D:171BINDING SITE FOR RESIDUE EDO A 487
24CC6SOFTWAREHIS B:150 , GLN B:299 , ALA B:316 , HIS B:317 , PHE B:334 , ARG B:422 , ILE B:426BINDING SITE FOR RESIDUE EDO B 484
25CC7SOFTWARETYR C:46 , ILE C:454 , ILE C:471 , TYR D:46 , ILE D:454BINDING SITE FOR RESIDUE EDO C 481
26CC8SOFTWARETRP B:197 , HIS B:207BINDING SITE FOR RESIDUE EDO B 485
27CC9SOFTWAREASP A:83 , LYS A:120 , THR A:121 , LEU A:122 , TYR A:146 , ARG A:284 , ASN A:301BINDING SITE FOR RESIDUE EDO A 488
28DC1SOFTWARETHR C:183 , GLU C:185 , LYS C:199BINDING SITE FOR RESIDUE EDO C 482
29DC2SOFTWAREGLU A:342 , GLY D:460 , ARG D:463BINDING SITE FOR RESIDUE EDO D 487
30DC3SOFTWAREARG A:10 , HIS D:106BINDING SITE FOR RESIDUE EDO D 488
31DC4SOFTWAREHIS D:150 , GLN D:299 , ALA D:316 , HIS D:317 , ARG D:422 , ILE D:426BINDING SITE FOR RESIDUE EDO D 489
32DC5SOFTWAREGLU B:203 , ASP B:398 , GLY B:410 , LYS B:411BINDING SITE FOR RESIDUE EDO B 486
33DC6SOFTWAREARG B:31 , ARG B:32BINDING SITE FOR RESIDUE EDO B 487
34DC7SOFTWAREHIS A:325 , LYS A:347 , ILE A:348BINDING SITE FOR RESIDUE EDO A 489
35DC8SOFTWAREGLN A:299 , ALA A:316 , HIS A:317 , PHE A:334 , ARG A:422 , ILE A:426BINDING SITE FOR RESIDUE EDO A 490
36DC9SOFTWAREGLU A:131 , SER A:132 , LYS D:114 , ARG D:139 , ASN D:140BINDING SITE FOR RESIDUE EDO D 490

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3C8V)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3C8V)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3C8V)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3C8V)

(-) Exons   (0, 0)

(no "Exon" information available for 3C8V)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:453
 aligned with Q30V63_DESAG | Q30V63 from UniProtKB/TrEMBL  Length:477

    Alignment length:476
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
         Q30V63_DESAG     - -MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNN 475
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------3c8vA02 A:42-228,A:395-411,A:431-475 Hexapeptide repeat proteins                                                                                                                           3c8vA03 A:229-394 He        xapeptide repeat proteins                                                                                                                 3c8vA02          3c8vA04 A:412-430  3               c8vA02 A:42-228,A:395-411,A:4 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh..hhhhhh..hhhhhhh...eeeeee.....eeeee.......eee.eeeee..eee..eee.........eeee..eeee.....eeeee..eee..eee..........eeeee..ee....eee...ee..ee....eee..eee..ee....eee..eee..ee...eeeee....eeeeee.hhhhhh............hhhhhhhhh.hhhhhhhhhh--------.....ee....eee...ee....ee....eeeeeee....ee....eeeeeeeee..ee....eee.eeeee..ee....eee......eee....ee....eee....eee...eee..ee.hhhhhhhheeehhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhhhhhhh---------------..eeeeee.............eeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3c8v A   0 GmTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKmIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAmPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLmEFVEVRQEDFEEVFAS--------SASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWmGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDmIFTGFNSFLQGSESSPLKIGDGCVVmPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTmGRmTFRGKGGPFLDSFKKRIKRILSENG---------------KNFTFNIIQPYQDGDPRGmYPTILIQPNN 475
                             |       9        19        29        39        49        59        69        79        89        99  |    109       119       129       139    |  149       159       169       179       189       199       209       219       229  |    239        |-       259       269       279       289  |    299       309       319       329       339       349     | 359       369       379       389       399   |  |409       419       429 |       -       449       459     | 469      
                             |                                                                                                  102-MSE                                   144-MSE                                                                                 232-MSE         248      257                                292-MSE                              329-MSE                   355-MSE                                         403-MSE                     431             447               465-MSE      
                             1-MSE                                                                                                                                                                                                                                                                                                                                                                                                              406-MSE                                                                 


Chain B from PDB  Type:PROTEIN  Length:461
 aligned with Q30V63_DESAG | Q30V63 from UniProtKB/TrEMBL  Length:477

    Alignment length:476
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
         Q30V63_DESAG     - -MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNN 475
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------3c8vB02 B:42-228,B:395-411,B:431-475 Hexapeptide repeat p   roteins                                                                                                                        3c8vB03 B:229-394           Hexapeptide repeat proteins                                                                                                               3c8vB02          3c8vB04 B:412-430  3c8vB02 B:42-22  8,B:395-411,B:431-475        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhh......hhhhhh..hhhhhhh...eeeeee......eeee.......eee..eeee..eee..eee.........ee..---.ee.....eeeee..eee..eee..........eeeee..ee....eee...ee..ee....eee..eee..ee....eee..eee..ee...eeeeee...eeeeee.hhhhhh............hhhhhhhhhhhhhhhhhh----------.....ee....eee...ee....ee....eeeeeee....ee....eeeeeeeee..ee....eee.eeeee..ee....eee......eee....ee....eee....eee...eee..ee.hhhhhhhheeehhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhhhhhh...............--.eeeeee.............eeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3c8v B   0 GmTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVC---mIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAmPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLmEFVEVRQEDFEEVF----------SASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWmGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDmIFTGFNSFLQGSESSPLKIGDGCVVmPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTmGRmTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQK--NFTFNIIQPYQDGDPRGmYPTILIQPNN 475
                             |       9        19        29        39        49        59        69        79        89        |-  |    109       119       129       139    |  149       159       169       179       189       199       209       219       229  |    239      |  -       259       269       279       289  |    299       309       319       329       339       349     | 359       369       379       389       399   |  |409       419       429       439     | 449       459     | 469      
                             1-MSE                                                                                           98   |                                       144-MSE                                                                                 232-MSE       246        257                                292-MSE                              329-MSE                   355-MSE                                         403-MSE                                   445  |              465-MSE      
                                                                                                                                102-MSE                                                                                                                                                                                                                                                                                                         406-MSE                                   448                           


Chain C from PDB  Type:PROTEIN  Length:465
 aligned with Q30V63_DESAG | Q30V63 from UniProtKB/TrEMBL  Length:477

    Alignment length:476
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
         Q30V63_DESAG     - -MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNN 475
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------3c8vC02 C:42-228,C:395-411,C:431-475 Hexapeptide repeat    proteins                                                                                                                        3c8vC03 C:229-394 Hexa      peptide repeat proteins                                                                                                                   3c8vC02          3c8vC04 C:412-430  3c8vC02 C:42-22  8,C:395-411,C:431-475        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhh......hhhhhh..hhhhhhh...eeeee.......eeee.......eee..eeee..eee..eee.........ee.---..ee.....eeeee..eee..eee..........eeeeeeeee....eee...eeeeee....eee..eee..ee....eee..eee..ee...eeeee....eeeeee.hhhhhh............hhhhhhhhh.hhhhhhhhh...------.....ee....eee...ee....ee....eee..ee....ee....eee..eeee..ee....eee.eeeee..ee....eee......eee....ee....eee....eee...eee..ee.hhhhhhhheeehhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhhhhhh..........hhhhh--..eeeee.............eeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3c8v C   0 GmTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFV---KmIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAmPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLmEFVEVRQEDFEEVFASGH------SASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWmGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDmIFTGFNSFLQGSESSPLKIGDGCVVmPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTmGRmTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQK--NFTFNIIQPYQDGDPRGmYPTILIQPNN 475
                             |       9        19        29        39        49        59        69        79        89       | - ||    109       119       129       139    |  149       159       169       179       189       199       209       219       229  |    239       249|      259       269       279       289  |    299       309       319       329       339       349     | 359       369       379       389       399   |  |409       419       429       439     | 449       459     | 469      
                             1-MSE                                                                                          97 101|                                       144-MSE                                                                                 232-MSE           250    257                                292-MSE                              329-MSE                   355-MSE                                         403-MSE                                   445  |              465-MSE      
                                                                                                                                102-MSE                                                                                                                                                                                                                                                                                                         406-MSE                                   448                           


Chain D from PDB  Type:PROTEIN  Length:464
 aligned with Q30V63_DESAG | Q30V63 from UniProtKB/TrEMBL  Length:477

    Alignment length:476
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
         Q30V63_DESAG     - -MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNN 475
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------3c8vD02 D:42-228,D:395-411,D:431-475 Hexapeptide repeat proteins                                                                                                                           3c8vD03 D:229-394           Hexapeptide repeat proteins                                                                                                               3c8vD02          3c8vD04 D:412-430  3c8vD02 D:42-22  8,D:395-411,D:431-475        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh..hhhhhh..hhhhhhh...eeeee.......eeee.......eee..eeee..eee..eee.........eeee..eeee.....eeeee..eee..eee..........eeeee..ee....eee...ee..ee....eee..eee..ee....eee..eee..ee...eeeeee...eeeeee.hhhhhh............hhhhhhhhh.hhhhhhh.----------.....ee....eee...ee....ee....eeeeeee....ee....eeeeeeeee..ee....eee.eeeee..ee....eee......eee....ee....eee....eee...eee..ee.hhhhhhhheeehhhhh..eeeeee..eeeeeehhhhhhhhhhhhhhhhhhh...............--..eeeee.............eeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3c8v D   0 GmTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKNSSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKmIPLHDDEVITIKDSFLNKTLVHSNSHDPESPEEFTIRNTVAmPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSYVQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLmEFVEVRQEDFEEVF----------SASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWmGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDmIFTGFNSFLQGSESSPLKIGDGCVVmPHTIIDLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTmGRmTFRGKGGPFLDSFKKRIKRILSENGAFFDGSEGTGHAQK--NFTFNIIQPYQDGDPRGmYPTILIQPNN 475
                             |       9        19        29        39        49        59        69        79        89        99  |    109       119       129       139    |  149       159       169       179       189       199       209       219       229  |    239      |  -       259       269       279       289  |    299       309       319       329       339       349     | 359       369       379       389       399   |  |409       419       429       439     | 449       459     | 469      
                             1-MSE                                                                                              102-MSE                                   144-MSE                                                                                 232-MSE       246        257                                292-MSE                              329-MSE                   355-MSE                                         403-MSE                                   445  |              465-MSE      
                                                                                                                                                                                                                                                                                                                                                                                                                                                406-MSE                                   448
   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3C8V)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)
(-)
Class: Mainly Beta (13760)
(-)
Architecture: 3 Solenoid (196)
(-)
Topology: UDP N-Acetylglucosamine Acyltransferase; domain 1 (90)
(-)
Homologous Superfamily: Hexapeptide repeat proteins (85)
(-)
Desulfuricans str (Desulfovibrio desulfuricans subsp) (1)
2a3c8vC03C:229-394
2b3c8vA03A:229-394
2c3c8vB03B:229-394
2d3c8vD03D:229-394
2e3c8vA02A:42-228,A:395-411,A:431-475
2f3c8vB02B:42-228,B:395-411,B:431-475
2g3c8vC02C:42-228,C:395-411,C:431-475
2h3c8vD02D:42-228,D:395-411,D:431-475

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3C8V)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q30V63_DESAG | Q30V63)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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  3c8v
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  Q30V63_DESAG | Q30V63
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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