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(-) Description

Title :  CRYSTAL STRUCTURE OF TCOYE WITH PHBA
 
Authors :  N. Okamoto, K. Yamaguchi, E. Mizohata, K. Tokuoka, N. Uchiyama, S. Sugi H. Matsumura, K. Inaka, Y. Urade, T. Inoue
Date :  26 Jan 11  (Deposition) - 01 Feb 12  (Release) - 01 Feb 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.04
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Alpha/Beta Barrel, Flavin Mononucleotide, Oxidoreductase- Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Okamoto, K. Yamaguchi, E. Mizohata, K. Tokuoka, N. Uchiyama, S. Sugiyama, H. Matsumura, K. Inaka, Y. Urade, T. Inoue
Structural Insight Into The Stereoselective Production Of Pgf2(Alpha) By Old Yellow Enzyme From Trypanosoma Cruzi
J. Biochem. V. 150 563 2011
PubMed-ID: 21840922  |  Reference-DOI: 10.1093/JB/MVR096

(-) Compounds

Molecule 1 - PROSTAGLANDIN F2A SYNTHASE
    ChainsA, B, C, D
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX-4T-1
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneTCPGFS
    Organism ScientificTRYPANOSOMA CRUZI
    Organism Taxid5693
    SynonymTCOYE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)A   
Biological Unit 2 (1x) B  
Biological Unit 3 (1x)  C 
Biological Unit 4 (1x)   D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1FMN4Ligand/IonFLAVIN MONONUCLEOTIDE
2HBA4Ligand/IonP-HYDROXYBENZALDEHYDE
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1FMN1Ligand/IonFLAVIN MONONUCLEOTIDE
2HBA1Ligand/IonP-HYDROXYBENZALDEHYDE
Biological Unit 2 (2, 2)
No.NameCountTypeFull Name
1FMN1Ligand/IonFLAVIN MONONUCLEOTIDE
2HBA1Ligand/IonP-HYDROXYBENZALDEHYDE
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1FMN1Ligand/IonFLAVIN MONONUCLEOTIDE
2HBA1Ligand/IonP-HYDROXYBENZALDEHYDE
Biological Unit 4 (2, 2)
No.NameCountTypeFull Name
1FMN1Ligand/IonFLAVIN MONONUCLEOTIDE
2HBA1Ligand/IonP-HYDROXYBENZALDEHYDE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:25 , PRO A:26 , LEU A:27 , THR A:28 , ALA A:61 , GLN A:103 , HIS A:195 , ASN A:198 , ARG A:249 , LEU A:286 , ASN A:313 , LEU A:314 , ARG A:315 , PHE A:335 , GLY A:336 , ALA A:337 , TYR A:363 , TYR A:364 , HOH A:398 , HOH A:423 , HOH A:481 , HOH A:496 , HBA A:600BINDING SITE FOR RESIDUE FMN A 501
2AC2SOFTWARETHR A:28 , PHE A:71 , HIS A:195 , ASN A:198 , TYR A:200 , TYR A:364 , FMN A:501BINDING SITE FOR RESIDUE HBA A 600
3AC3SOFTWAREALA B:25 , PRO B:26 , LEU B:27 , THR B:28 , ALA B:61 , GLN B:103 , HIS B:195 , ASN B:198 , ARG B:249 , LEU B:286 , ASN B:313 , LEU B:314 , ARG B:315 , GLY B:336 , ALA B:337 , TYR B:363 , TYR B:364 , HOH B:383 , HOH B:393 , HOH B:402 , HOH B:441 , HBA B:601BINDING SITE FOR RESIDUE FMN B 501
4AC4SOFTWAREPHE B:148 , HIS B:195 , ASN B:198 , TYR B:200 , TYR B:364 , FMN B:501BINDING SITE FOR RESIDUE HBA B 601
5AC5SOFTWAREALA C:25 , PRO C:26 , LEU C:27 , THR C:28 , ALA C:61 , GLN C:103 , HIS C:195 , ASN C:198 , ARG C:249 , LEU C:286 , MET C:290 , ASN C:313 , LEU C:314 , ARG C:315 , GLY C:336 , ALA C:337 , TYR C:363 , TYR C:364 , HOH C:399 , HOH C:413 , HBA C:602BINDING SITE FOR RESIDUE FMN C 501
6AC6SOFTWARETHR C:28 , PHE C:71 , HIS C:195 , ASN C:198 , TYR C:200 , TYR C:364 , FMN C:501BINDING SITE FOR RESIDUE HBA C 602
7AC7SOFTWAREALA D:25 , PRO D:26 , LEU D:27 , THR D:28 , ALA D:61 , GLN D:103 , HIS D:195 , ASN D:198 , ARG D:249 , MET D:290 , ASN D:313 , LEU D:314 , ARG D:315 , PHE D:335 , GLY D:336 , ALA D:337 , TYR D:363 , TYR D:364 , HOH D:405 , HOH D:439 , HOH D:451 , HOH D:472 , HOH D:515 , HBA D:603BINDING SITE FOR RESIDUE FMN D 501
8AC8SOFTWARETHR D:28 , PHE D:71 , PHE D:148 , HIS D:195 , ASN D:198 , TYR D:200 , TYR D:364 , FMN D:501BINDING SITE FOR RESIDUE HBA D 603

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3ATZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3ATZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ATZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3ATZ)

(-) Exons   (0, 0)

(no "Exon" information available for 3ATZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:368
 aligned with Q8I6L9_TRYCR | Q8I6L9 from UniProtKB/TrEMBL  Length:379

    Alignment length:373
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373   
         Q8I6L9_TRYCR     4 FPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYPT 376
               SCOP domains d3atza_ A: automated matches                                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee..eee...eee...............hhhhhhhhhhh.....eeeeeeee...............hhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhh..-----.......ee...........................ee.hhhhhhhhhhhhhhhhhhhhhhh....eeeee....hhhhhhhh..............hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhh...hhhhhhhhhhhhhhhhh..eeeee..........hhhhhhhhhh...eeee...hhhhhhhhhhh....eeeehhhhhhh.hhhhhhhh.......hhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3atz A   4 FPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQ-----DPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYPT 376
                                    13        23        33        43        53        63        73        83        93       103       113     |   - |     133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373   
                                                                                                                                             119   125                                                                                                                                                                                                                                                           

Chain B from PDB  Type:PROTEIN  Length:374
 aligned with Q8I6L9_TRYCR | Q8I6L9 from UniProtKB/TrEMBL  Length:379

    Alignment length:374
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371    
         Q8I6L9_TRYCR     2 ATFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYP 375
               SCOP domains d3atzb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eee..eee...eee...............hhhhhhhhhhh.....eeeeeeee...............hhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhh.............ee...........................ee.hhhhhhhhhhhhhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh...eeeee............hhhhhhhhhhhhhhhhh..eeeee..........hhhhhhhhhh...eeee...hhhhhhhhhhh....eeeehhhhhhh.hhhhhhhh.......hhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3atz B   2 ATFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYP 375
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371    

Chain C from PDB  Type:PROTEIN  Length:374
 aligned with Q8I6L9_TRYCR | Q8I6L9 from UniProtKB/TrEMBL  Length:379

    Alignment length:374
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373    
         Q8I6L9_TRYCR     4 FPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYPTY 377
               SCOP domains d3atzc_ C: automated matches                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee..eee...eee...............hhhhhhhhhhh.....eeeeeeee...............hhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhh..............ee...........................ee.hhhhhhhhhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh..............hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhh...hhhhhhhhhhhhhhhhh..eeeee..........hhhhhhhh.....eeee...hhhhhhhhhhh....eeeehhhhhhh.hhhhhhhhh......hhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3atz C   4 FPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYPTY 377
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373    

Chain D from PDB  Type:PROTEIN  Length:376
 aligned with Q8I6L9_TRYCR | Q8I6L9 from UniProtKB/TrEMBL  Length:379

    Alignment length:376
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371      
         Q8I6L9_TRYCR     2 ATFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYPTY 377
               SCOP domains d3atzd_ D: automated matches                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eee..eee...eee...............hhhhhhhhhhh.....eeeeeeee...............hhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhh..............ee.........ee..........ee....ee.hhhhhhhhhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh..............hhhhhhhhhhhhhhhhhhhhh...eeeee....hhhhh...hhhhhhhhhhhhhhhhh..eeeee..........hhhhhhhhhh...eeee...hhhhhhhhhhh....eeeehhhhhhh.hhhhhhhhh......hhhhh.............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3atz D   2 ATFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRTAVGYNDYPTY 377
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3ATZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ATZ)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q8I6L9_TRYCR | Q8I6L9)
molecular function
    GO:0010181    FMN binding    Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

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        Q8I6L9_TRYCR | Q8I6L93aty

(-) Related Entries Specified in the PDB File

3aty