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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HYPOTHETICAL TANDEM-TYPE UNIVERSAL STRESS PROTEIN TTHA0350 FROM THERMUS THERMOPHILUS HB8
 
Authors :  M. Goto, H. Iino, N. Shimizu, S. Kuramitsu
Date :  01 Dec 09  (Deposition) - 15 Dec 10  (Release) - 15 Dec 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.52
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  A  (1x)
Biol. Unit 3:  B  (1x)
Keywords :  Tandem-Type Universal Stress Protein, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Iino, N. Shimizu, A. Ebihara, M. Goto, K. Hirotsu, S. Kuramitsu
Crystal Structure Of The Hypothetical Tandem-Type Universal Stress Protein Ttha0350 From Thermus Thermophilus Hb8
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE UNCHARACTERIZED PROTEIN TTHA0350
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TTHA0350
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 300852
    Strain: HB8
    Synonym: HYPOTHETICAL TANDEM-TYPE UNIVERSAL STRESS PROTEIN TTHA0350

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): AB
Biological Unit 2 (1x): A 
Biological Unit 3 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3AB7)

(-) Sites  (0, 0)

(no "Site" information available for 3AB7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3AB7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3AB7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3AB7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3AB7)

(-) Exons   (0, 0)

(no "Exon" information available for 3AB7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:242
 aligned with Q5SLE3_THET8 | Q5SLE3 from UniProtKB/TrEMBL  Length:268

    Alignment length:268
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260        
         Q5SLE3_THET8     1 MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLALGAPVRRLVFGSTAERVIRNAQGPVLTAR 268
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...hhhhhhhhhhhhhhhhhhh..eeeeeee....---------------------.hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhhhhh...eeeee..-----.hhhhhhhhhhhhhhhh...eeee........eeeee...hhhhhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhh...eeeeee.hhhhh...hhhhhhhhhh...eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ab7 A   1 MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRL---------------------ELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRS-----DGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLALGAPVRRLVFGSTAERVIRNAQGPVLTAR 268
                                    10        20        30        40|        -         -  |     70        80        90       100       110       | -   |   130       140       150       160       170       180       190       200       210       220       230       240       250       260        
                                                                   41                    63                                                    118   124                                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:235
 aligned with Q5SLE3_THET8 | Q5SLE3 from UniProtKB/TrEMBL  Length:268

    Alignment length:268
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260        
         Q5SLE3_THET8     1 MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLALGAPVRRLVFGSTAERVIRNAQGPVLTAR 268
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...hhhhhhhhhhhhhhhhhhh..eeeeeee...---------------------.hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhh.eeeee...-------...hhhhhhhhhhh...eeee........eeeee...hhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhh...eeeeee....-----hhhhhhhhhh...eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ab7 B   1 MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTR---------------------TELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSG-------GGLGSTADRVLRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLALGAPVR-----STAERVIRNAQGPVLTAR 268
                                    10        20        30        40         -         - |      70        80        90       100       110        |-      |130       140       150       160       170       180       190       200       210       220       230       240    |    -|      260        
                                                                  40                    62                                                      119     127                                                                                                                   245   251
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3AB7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3AB7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3AB7)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (Q5SLE3_THET8 | Q5SLE3)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q5SLE3_THET8 | Q5SLE3: 3ab8

(-) Related Entries Specified in the PDB File

3ab8