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(-) Description

Title :  CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI PEROXIREDOXIN I C48S MUTANT WITH ONE DECAMER IN THE ASU
 
Authors :  F. Saccoccia, F. Angelucci, M. Ardini, G. Boumis, M. Brunori, L. Dilean R. Ippoliti, A. E. Miele, G. Natoli, S. Scotti, A. Bellelli
Date :  28 Jan 13  (Deposition) - 11 Sep 13  (Release) - 13 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.49
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J
Keywords :  Oxidoreductase, Peroxidase, Schistosomiasis, Chaperone, Thioredoxin Fold (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Angelucci, F. Saccoccia, M. Ardini, G. Boumis, M. Brunori, L. Dileandro, R. Ippoliti, A. E. Miele, G. Natoli, S. Scotti, A. Bellelli
Switching Between The Alternative Structures And Functions Of A 2-Cys Peroxiredoxin, By Site-Directed Mutagenesis
J. Mol. Biol. V. 425 4556 2013
PubMed-ID: 24021815  |  Reference-DOI: 10.1016/J.JMB.2013.09.002

(-) Compounds

Molecule 1 - PEROXIREDOXIN I
    Chains: A, B, C, D, E, F, G, H, I, J
    EC Number: 1.11.1.15
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PRSETA
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: PLYSS
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: SCHISTOSOMA MANSONI
    Organism Taxid: 6183

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric/Biological Unit : ABCDEFGHIJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric/Biological Unit (2, 16)
No.NameCountTypeFull Name
1PEG4Ligand/IonDI(HYDROXYETHYL)ETHER
2SO412Ligand/IonSULFATE ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:45 , PHE A:46 , VAL A:47 , SER A:48 , ARG A:124BINDING SITE FOR RESIDUE SO4 A1165
02AC2SOFTWARETHR C:45 , SER C:48 , ARG C:124BINDING SITE FOR RESIDUE SO4 C1165
03AC3SOFTWARETHR H:45 , PHE H:46 , VAL H:47 , SER H:48 , ARG H:124BINDING SITE FOR RESIDUE SO4 H1164
04AC4SOFTWAREPRO J:41 , THR J:45 , PHE J:46 , VAL J:47 , SER J:48 , ARG J:124 , LYS J:143 , SO4 J:1166BINDING SITE FOR RESIDUE SO4 J1165
05AC5SOFTWARETYR A:78 , ASN J:121 , SO4 J:1165BINDING SITE FOR RESIDUE SO4 J1166
06AC6SOFTWARETHR I:45 , PHE I:46 , VAL I:47 , SER I:48 , ARG I:124 , HOH I:2005 , HOH I:2019BINDING SITE FOR RESIDUE SO4 I1164
07AC7SOFTWAREASP I:87 , ARG I:88 , LYS I:89 , SO4 I:1166BINDING SITE FOR RESIDUE SO4 I1165
08AC8SOFTWARETHR E:45 , PHE E:46 , VAL E:47 , SER E:48 , ARG E:124 , HOH E:2009BINDING SITE FOR RESIDUE SO4 E1164
09AC9SOFTWARETHR D:45 , PHE D:46 , VAL D:47 , SER D:48 , ARG D:124 , HOH D:2011BINDING SITE FOR RESIDUE SO4 D1165
10BC1SOFTWARETHR F:45 , PHE F:46 , VAL F:47 , SER F:48 , ARG F:124 , PEG F:1166BINDING SITE FOR RESIDUE SO4 F1164
11BC2SOFTWARETHR G:45 , PHE G:46 , VAL G:47 , SER G:48 , ARG G:124BINDING SITE FOR RESIDUE SO4 G1164
12BC3SOFTWARETYR E:78 , LYS I:89 , SO4 I:1165 , HOH I:2024BINDING SITE FOR RESIDUE SO4 I1166
13BC4SOFTWAREGLU E:151 , LEU E:155 , THR F:139 , ARG F:147 , SER F:148 , GLU F:151 , THR F:152 , LEU F:155BINDING SITE FOR RESIDUE PEG F1165
14BC5SOFTWARETYR H:78 , ASP I:119 , ASN I:121 , LYS I:143BINDING SITE FOR RESIDUE PEG I1167
15BC6SOFTWAREVAL H:2 , LEU H:3 , LEU H:4 , ARG H:7 , PRO H:8BINDING SITE FOR RESIDUE PEG H1165
16BC7SOFTWAREPHE F:46 , SO4 F:1164BINDING SITE FOR RESIDUE PEG F1166

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3ZL5)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Phe B:46 -Val B:47

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ZL5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3ZL5)

(-) Exons   (0, 0)

(no "Exon" information available for 3ZL5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:162
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:162
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162  
         O97161_SCHMA     3 LLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
               SCOP domains d3zl5a_ A: automated matches                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....ee....eeeee....eeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhhh........eee...hhhhhhh..ee....ee.eeeeee....eeeeeeee......hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3zl5 A   3 LLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162  


Chain B from PDB  Type:PROTEIN  Length:164
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    
         O97161_SCHMA     1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
               SCOP domains d3zl5b_ B: automated matches                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee....eeeeee..eeeeee.hhhh..eeeeee.........hhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhhh........eee...hhhhhhh..ee....ee.eeeeee....eeeeeeee......hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 B   1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    


Chain C from PDB  Type:PROTEIN  Length:164
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    
         O97161_SCHMA     1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
               SCOP domains d3zl5c_ C: automated matches                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeeee..eeeeee.hhhh..eeeeee.......hhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh..............eee...hhhhhhh..ee....ee.eeeeee.....eeeeeee......hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 C   1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    


Chain D from PDB  Type:PROTEIN  Length:163
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:163
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161   
         O97161_SCHMA     2 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
               SCOP domains d3zl5d_ D: automated matches                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee....eeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhh.............eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 D   2 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161   


Chain E from PDB  Type:PROTEIN  Length:161
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:161
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162 
         O97161_SCHMA     3 LLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
               SCOP domains d3zl5e_ E: automated matches                                                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeee..eeeeee.hhhh..eeeeee.......hhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhhh........eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 E   3 LLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162 


Chain F from PDB  Type:PROTEIN  Length:163
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160   
         O97161_SCHMA     1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
               SCOP domains d3zl5f_ F: automated matches                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee....eeeeee..eeeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhh.............eee...hhhhhhh...........eeeeee....eeeeeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 F   1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160   


Chain G from PDB  Type:PROTEIN  Length:162
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:162
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161  
         O97161_SCHMA     2 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
               SCOP domains d3zl5g_ G: automated matches                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........eeeeee..eeeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhh.............eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3zl5 G   2 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161  


Chain H from PDB  Type:PROTEIN  Length:163
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160   
         O97161_SCHMA     1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
               SCOP domains d3zl5h_ H: automated matches                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeeee..eeeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh........eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 H   1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160   


Chain I from PDB  Type:PROTEIN  Length:162
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:162
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161  
         O97161_SCHMA     2 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
               SCOP domains d3zl5i_ I: automated matches                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........eeeeee..eeeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhhh........eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3zl5 I   2 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVE 163
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161  


Chain J from PDB  Type:PROTEIN  Length:164
 aligned with O97161_SCHMA | O97161 from UniProtKB/TrEMBL  Length:185

    Alignment length:164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    
         O97161_SCHMA     1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
               SCOP domains d3zl5j_ J: automated matches                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeeee..eeeeee.hhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhh.............eee...hhhhhhh...........eeeeee.....eeeeeee......hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zl5 J   1 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVSPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEK 164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 10)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3ZL5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ZL5)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J   (O97161_SCHMA | O97161)
molecular function
    GO:0016209    antioxidant activity    Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004601    peroxidase activity    Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
    GO:0051920    peroxiredoxin activity    Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH.
biological process
    GO:0098869    cellular oxidant detoxification    Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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        O97161_SCHMA | O97161: 3zlp 3ztl 3zvj

(-) Related Entries Specified in the PDB File

3zlp CRYSTAL STRUCTURE OF SCHISTOSOMA MANSONI PEROXIREDOXIN 1 C48P MUTANT FORM WITH FOUR DECAMERS IN THE ASYMMETRIC UNIT