3X34 - JenaLib

Title :   CRYSTAL STRUCTURE OF THE REDUCED FORM OF THE SOLUBILIZED DOMAIN OF PORCINE CYTOCHROME B5 IN FORM 1 CRYSTAL

Authors :   Y. Hirano, S. Kimura, T. Tamada

Date :   14 Jan 15 (Deposition) - 15 Jul 15 (Release) - 15 Jul 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   0.76

Chains :   Asym./Biol. Unit : A

Keywords :   Heme, Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Hirano, S. Kimura, T. Tamada
High-Resolution Crystal Structures Of The Solubilized Domai Of Porcine Cytochrome B5
Acta Crystallogr. , Sect. D V. 71 1572 2015
PubMed: search | Reference-DOI: 10.1107/S1399004715009438

Compounds

Molecule 1 - CYTOCHROME B5
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21
	Expression System Plasmid	:	PCPB5
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Vector Type	:	PLASMID
	Fragment	:	N-TERMINAL DOMAIN, UNP RESIDUES 1-94
	Gene	:	CYB5A, CYB5
	Organism Common	:	PIG
	Organism Scientific	:	SUS SCROFA
	Organism Taxid	:	9823

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:10 , TYR A:12 , LEU A:30 , LEU A:37 , PHE A:40 , HIS A:44 , PRO A:45 , GLY A:46 , VAL A:50 , LEU A:51 , ASN A:62 , PHE A:63 , VAL A:66 , HIS A:68 , SER A:69 , ALA A:72 , SER A:76 , HOH A:240 , HOH A:288 , HOH A:302 , HOH A:329 , HOH A:349 , HOH A:353 , HOH A:373 , HOH A:376 , HOH A:388 , HOH A:407 , HOH A:413 , HOH A:441	BINDING SITE FOR RESIDUE HEM A 101
2	AC2	SOFTWARE	GLU A:42 , GLU A:48 , GLN A:54 , ASP A:58 , HOH A:201 , HOH A:202	BINDING SITE FOR RESIDUE CA A 102
3	AC3	SOFTWARE	GLU A:42 , HOH A:206 , HOH A:211 , HOH A:215 , HOH A:228 , HOH A:231 , HOH A:241	BINDING SITE FOR RESIDUE CA A 103

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:PROTEIN  Length:87
                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eehhhhhh..ee..eeeeee..eeee..hhhhh....hhhhhh.....hhhhhhhhh.hhhhhhhhhh.eeeee.hhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                  3x34 A  8 AVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKIAK 94
                                    17        27        37        47        57        67        77        87

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (13, 13)

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	3x34
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Description