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Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Biological Unit 7 (Jmol Viewer)

Biological Unit 8 (Jmol Viewer)

Biological Unit 9 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF ERP46 TRX1

Authors :   K. Inaba, M. Suzuki, R. Kojima

Date :   04 Aug 13 (Deposition) - 25 Jun 14 (Release) - 25 Jun 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: E  (1x)
Biol. Unit 6: F  (1x)
Biol. Unit 7: G  (1x)
Biol. Unit 8: H  (1x)
Biol. Unit 9: I  (1x)

Keywords :   Pdi Family Member, Thioredoxin Domain, Protein Disulfide Isomerase, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. Kojima, M. Okumura, S. Masui, S. Kanemura, M. Inoue, M. Saiki, H. Yamaguchi, T. Hikima, M. Suzuki, S. Akiyama, K. Inaba
Radically Different Thioredoxin Domain Arrangement Of Erp46 An Efficient Disulfide Bond Introducer Of The Mammalian Pdi Family
Structure V. 22 431 2014
PubMed-ID: 24462249 | Reference-DOI: 10.1016/J.STR.2013.12.013

Molecule 1 - THIOREDOXIN DOMAIN-CONTAINING PROTEIN 5
	Chains	:	A, B, C, D, E, F, G, H, I
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	POPTG
	Expression System Strain	:	C41(DE3)RIPL
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	TRX1 DOMAIN, UNP RESIDUES 62-170
	Gene	:	TXNDC5
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	ERP46, ENDOPLASMIC RETICULUM RESIDENT PROTEIN 46, ER PROTEIN 46, THIOREDOXIN-LIKE PROTEIN P46

		1	2	3	4	5	6	7	8	9
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:					E
Biological Unit 6 (1x)	:						F
Biological Unit 7 (1x)	:							G
Biological Unit 8 (1x)	:								H
Biological Unit 9 (1x)	:									I

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 31)

No.	Name	Count	Type	Full Name
1	GOL	11	Ligand/Ion	GLYCEROL
2	K	5	Ligand/Ion	POTASSIUM ION
3	PO4	15	Ligand/Ion	PHOSPHATE ION

Biological Unit 1 (2, 7)

No.	Name	Count	Type	Full Name
1	GOL	3	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	4	Ligand/Ion	PHOSPHATE ION

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	GOL	2	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	1	Ligand/Ion	PHOSPHATE ION

Biological Unit 3 (2, 3)

No.	Name	Count	Type	Full Name
1	GOL	1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	2	Ligand/Ion	PHOSPHATE ION

Biological Unit 4 (1, 2)

No.	Name	Count	Type	Full Name
1	GOL	-1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	2	Ligand/Ion	PHOSPHATE ION

Biological Unit 5 (2, 2)

No.	Name	Count	Type	Full Name
1	GOL	1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	1	Ligand/Ion	PHOSPHATE ION

Biological Unit 6 (1, 1)

No.	Name	Count	Type	Full Name
1	GOL	1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	-1	Ligand/Ion	PHOSPHATE ION

Biological Unit 7 (2, 3)

No.	Name	Count	Type	Full Name
1	GOL	1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	2	Ligand/Ion	PHOSPHATE ION

Biological Unit 8 (2, 2)

No.	Name	Count	Type	Full Name
1	GOL	1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	1	Ligand/Ion	PHOSPHATE ION

Biological Unit 9 (2, 3)

No.	Name	Count	Type	Full Name
1	GOL	1	Ligand/Ion	GLYCEROL
2	K	-1	Ligand/Ion	POTASSIUM ION
3	PO4	2	Ligand/Ion	PHOSPHATE ION

Asymmetric Unit (31, 31)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	SER A:129 , ARG A:134 , HOH A:331 , HOH A:337 , THR F:67 , ALA F:68 , ASP F:69 , HIS F:124	BINDING SITE FOR RESIDUE PO4 A 201
02	AC2	SOFTWARE	THR A:67 , ALA A:68 , ASP A:69 , HIS A:124 , HOH A:320 , HOH A:340	BINDING SITE FOR RESIDUE PO4 A 202
03	AC3	SOFTWARE	PRO A:154 , ARG A:155	BINDING SITE FOR RESIDUE PO4 A 203
04	AC4	SOFTWARE	GLN A:146 , GLU A:147	BINDING SITE FOR RESIDUE PO4 A 204
05	AC5	SOFTWARE	ALA A:123 , HIS A:124 , HOH A:318 , HOH A:336	BINDING SITE FOR RESIDUE GOL A 205
06	AC6	SOFTWARE	ARG A:134	BINDING SITE FOR RESIDUE GOL A 206
07	AC7	SOFTWARE	TYR A:151 , GLN A:152 , GLY A:153 , ARG A:155	BINDING SITE FOR RESIDUE GOL A 207
08	AC8	SOFTWARE	THR B:67 , ALA B:68 , ASP B:69 , HIS B:124 , HOH B:323	BINDING SITE FOR RESIDUE PO4 B 201
09	AC9	SOFTWARE	SER B:77 , HOH B:315 , LYS F:113	BINDING SITE FOR RESIDUE GOL B 202
10	BC1	SOFTWARE	LEU B:65 , THR B:67 , HIS B:124 , HOH B:312	BINDING SITE FOR RESIDUE GOL B 203
11	BC2	SOFTWARE	THR C:67 , ALA C:68 , ASP C:69 , HIS C:124 , HOH C:327	BINDING SITE FOR RESIDUE PO4 C 201
12	BC3	SOFTWARE	HIS C:60 , LYS C:63 , ASN C:100	BINDING SITE FOR RESIDUE PO4 C 202
13	BC4	SOFTWARE	LEU C:65 , THR C:67 , ALA C:123 , HIS C:124 , HOH C:331 , HOH C:334	BINDING SITE FOR RESIDUE GOL C 203
14	BC5	SOFTWARE	HIS C:64 , LEU C:65 , TYR C:66 , HOH C:320	BINDING SITE FOR RESIDUE K C 204
15	BC6	SOFTWARE	GLN C:146	BINDING SITE FOR RESIDUE K C 205
16	BC7	SOFTWARE	THR D:67 , ALA D:68 , ASP D:69 , HIS D:124	BINDING SITE FOR RESIDUE PO4 D 201
17	BC8	SOFTWARE	ARG D:134 , HOH D:318	BINDING SITE FOR RESIDUE PO4 D 202
18	BC9	SOFTWARE	SER B:129 , ARG B:134 , HOH B:311 , HOH B:317 , THR E:67 , ALA E:68 , ASP E:69 , HIS E:124	BINDING SITE FOR RESIDUE PO4 E 201
19	CC1	SOFTWARE	SER B:125 , ASP B:126 , SER B:129 , HOH B:311 , LEU E:65 , THR E:67 , HIS E:124 , HOH E:302	BINDING SITE FOR RESIDUE GOL E 202
20	CC2	SOFTWARE	CYS B:128 , TYR B:136 , THR E:67 , MET E:70	BINDING SITE FOR RESIDUE K E 203
21	CC3	SOFTWARE	SER A:125 , ASP A:126 , HOH A:350 , TYR F:66 , ALA F:123 , HIS F:124 , HOH F:304 , HOH F:331	BINDING SITE FOR RESIDUE GOL F 201
22	CC4	SOFTWARE	THR A:122 , HOH A:314 , TYR F:66 , ASN F:107 , TYR F:115 , HOH F:327	BINDING SITE FOR RESIDUE K F 202
23	CC5	SOFTWARE	PRO C:154 , ARG C:155 , GLY G:90 , GLN G:93 , ARG G:94	BINDING SITE FOR RESIDUE PO4 G 201
24	CC6	SOFTWARE	THR G:67 , ALA G:68 , ASP G:69 , HIS G:124 , HOH G:309 , HOH G:317 , SER H:129 , ARG H:134	BINDING SITE FOR RESIDUE PO4 G 202
25	CC7	SOFTWARE	LEU G:65 , THR G:67 , ASP G:120 , ALA G:123 , HIS G:124 , SER H:125 , ASP H:126	BINDING SITE FOR RESIDUE GOL G 203
26	CC8	SOFTWARE	THR H:67 , ALA H:68 , ASP H:69 , HIS H:124 , GOL H:202	BINDING SITE FOR RESIDUE PO4 H 201
27	CC9	SOFTWARE	TYR H:66 , THR H:67 , HIS H:124 , PO4 H:201 , HOH H:301 , HOH H:309 , HOH H:314	BINDING SITE FOR RESIDUE GOL H 202
28	DC1	SOFTWARE	GLN I:146 , GLU I:147	BINDING SITE FOR RESIDUE PO4 I 201
29	DC2	SOFTWARE	THR I:67 , ALA I:68 , ASP I:69 , HIS I:124 , HOH I:316	BINDING SITE FOR RESIDUE PO4 I 202
30	DC3	SOFTWARE	THR I:67 , HIS I:124 , HOH I:304	BINDING SITE FOR RESIDUE GOL I 203
31	DC4	SOFTWARE	ASP I:69 , HIS I:73	BINDING SITE FOR RESIDUE K I 204

Asymmetric Unit

No.	Residues
1	A:89	-	A:92
2	A:121	-	A:128
3	B:121	-	B:128
4	C:121	-	C:128
5	D:89	-	D:92
6	D:121	-	D:128
7	E:121	-	E:128
8	F:121	-	F:128
9	G:121	-	G:128
10	H:121	-	H:128
11	I:121	-	I:128

Asymmetric Unit

No.	Residues
1	Tyr A:136	-	Pro A:137
2	Tyr B:136	-	Pro B:137
3	Tyr C:136	-	Pro C:137
4	Tyr D:136	-	Pro D:137
5	Tyr E:136	-	Pro E:137
6	Tyr F:136	-	Pro F:137
7	Tyr G:136	-	Pro G:137
8	Tyr H:136	-	Pro H:137
9	Tyr I:136	-	Pro I:137

(no "SAP(SNP)/Variant" information available for 3WGD)

Asymmetric Unit (2, 18)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	9	- A:170-170 B:170-170 C:170-170 D:170-170 E:170-170 F:170-170 G:170-170 H:170-170 I:170-170 -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	9	A:81-99 B:81-99 C:81-99 D:81-99 E:81-99 F:81-99 G:81-99 H:81-99 I:81-99 - -

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- A:170-170 - - - - - - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	A:81-99 - - - - - - - - - -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - B:170-170 - - - - - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- B:81-99 - - - - - - - - -

Biological Unit 3 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - C:170-170 - - - - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - C:81-99 - - - - - - - -

Biological Unit 4 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - - D:170-170 - - - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - - D:81-99 - - - - - - -

Biological Unit 5 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - - - E:170-170 - - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - - - E:81-99 - - - - - -

Biological Unit 6 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - - - - F:170-170 - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - - - - F:81-99 - - - - -

Biological Unit 7 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - - - - - G:170-170 - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - - - - - G:81-99 - - - -

Biological Unit 8 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - - - - - - H:170-170 - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - - - - - - H:81-99 - - -

Biological Unit 9 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	TXND5_HUMAN	36-169 170-295 304-429	1	- - - - - - - - - I:170-170 -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	TXND5_HUMAN	81-99 209-227 342-360	1	- - - - - - - - I:81-99 - -

Asymmetric Unit (3, 27)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000379757	1	ENSE00001482400	chr6:7911047-7910747	301	TXND5_HUMAN	1-88	88	9	A:60-88 B:60-88 C:59-88 D:60-88 E:60-88 F:60-88 G:60-88 H:61-88 I:60-88	29 29 30 29 29 29 29 28 29
1.3	ENST00000379757	3	ENSE00002035816	chr6:7904956-7904807	150	TXND5_HUMAN	88-138	51	9	A:88-138 B:88-138 C:88-138 D:88-138 E:88-138 F:88-138 (gaps) G:88-138 (gaps) H:88-138 I:88-138	51 51 51 51 51 51 51 51 51
1.4b	ENST00000379757	4b	ENSE00002030712	chr6:7899914-7899809	106	TXND5_HUMAN	138-173	36	9	A:138-170 B:138-170 C:138-170 D:138-170 E:138-170 F:138-170 G:138-170 H:138-170 I:138-170	33 33 33 33 33 33 33 33 33
1.5b	ENST00000379757	5b	ENSE00002020031	chr6:7895435-7895339	97	TXND5_HUMAN	174-206	33	0	-	-
1.6	ENST00000379757	6	ENSE00002062288	chr6:7891969-7891854	116	TXND5_HUMAN	206-244	39	0	-	-
1.7	ENST00000379757	7	ENSE00002051337	chr6:7889814-7889728	87	TXND5_HUMAN	245-273	29	0	-	-
1.8c	ENST00000379757	8c	ENSE00002072823	chr6:7889081-7888938	144	TXND5_HUMAN	274-321	48	0	-	-
1.9	ENST00000379757	9	ENSE00002061487	chr6:7886276-7886194	83	TXND5_HUMAN	322-349	28	0	-	-
1.10	ENST00000379757	10	ENSE00002026226	chr6:7884721-7884592	130	TXND5_HUMAN	349-392	44	0	-	-
1.11c	ENST00000379757	11c	ENSE00001964269	chr6:7883499-7881750	1750	TXND5_HUMAN	393-432	40	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:111
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhheeeeeee...hhhhhhhhhhhhhhhhhhh......eeeeeee...hhhhhhhh......eeeee......eee....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: A:60-88       -------------------------------------------------Exon 1.4b  PDB: A:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: A:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd A  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109       119       129       139       149       159       169

Chain B from PDB  Type:PROTEIN  Length:111
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhheeeeeee...hhhhhhhhhhhhhhhhhhh......eeeeeee...hhhhhhhh......eeeee......eee....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: B:60-88       -------------------------------------------------Exon 1.4b  PDB: B:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: B:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd B  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109       119       129       139       149       159       169

Chain C from PDB  Type:PROTEIN  Length:112
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:112
                                    68        78        88        98       108       118       128       138       148       158       168  
          TXND5_HUMAN    59 DPHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains ---------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhh.......eeeeee...hhhhhhhh......eeeee......ee.....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                          T PROSITE (1)
                PROSITE (2) ----------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: C:59-88        -------------------------------------------------Exon 1.4b  PDB: C:138-170         Transcript 1 (1)
           Transcript 1 (2) -----------------------------Exon 1.3  PDB: C:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd C  59 SHMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    68        78        88        98       108       118       128       138       148       158       168

Chain D from PDB  Type:PROTEIN  Length:111
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhheeeeeee...hhhhhhhhhhhhhhhhhhh......eeeeeee...hhhhhhhh......eeeee......eee....hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: D:60-88       -------------------------------------------------Exon 1.4b  PDB: D:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: D:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd D  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109       119       129       139       149       159       169

Chain E from PDB  Type:PROTEIN  Length:111
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhh.......eeeeee...hhhhhhhh......eeeee......ee.....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: E:60-88       -------------------------------------------------Exon 1.4b  PDB: E:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: E:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd E  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109       119       129       139       149       159       169

Chain F from PDB  Type:PROTEIN  Length:109
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhh..--...eeeeee...hhhhhhhh......eeeee......eee....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: F:60-88       -------------------------------------------------Exon 1.4b  PDB: F:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: F:88-138 (gaps) UniProt: 88-138     -------------------------------- Transcript 1 (2)
                 3wgd F  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSM--AKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109  |    119       129       139       149       159       169 
                                                                           109  |                                                          
                                                                              112

Chain G from PDB  Type:PROTEIN  Length:109
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhheeeeeee...hhhhhhhhhhhhhhhhhhh...--.eeeeeee...hhhhhhhh......eeeee......eee....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: G:60-88       -------------------------------------------------Exon 1.4b  PDB: G:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: G:88-138 (gaps) UniProt: 88-138     -------------------------------- Transcript 1 (2)
                 3wgd G  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSME--KVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109|  |   119       129       139       149       159       169 
                                                                            110  |                                                         
                                                                               113

Chain H from PDB  Type:PROTEIN  Length:110
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:110
                                    70        80        90       100       110       120       130       140       150       160       170
          TXND5_HUMAN    61 HSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhheeeeeee...hhhhhhhhhhhhhhhhhhh......eeeeeee...hhhhhhhh......eeeee......ee.....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                        T PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: H:61-88      -------------------------------------------------Exon 1.4b  PDB: H:138-170         Transcript 1 (1)
           Transcript 1 (2) ---------------------------Exon 1.3  PDB: H:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd H  61 MSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    70        80        90       100       110       120       130       140       150       160       170

Chain I from PDB  Type:PROTEIN  Length:111
 aligned with TXND5_HUMAN | Q8NBS9 from UniProtKB/Swiss-Prot  Length:432

    Alignment length:111
                                    69        79        89        99       109       119       129       139       149       159       169 
          TXND5_HUMAN    60 PHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
               SCOP domains --------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhh.......eeeeee...hhhhhhhh......eeeee......ee.....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 36-169                                                                         T PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      ----------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1  PDB: I:60-88       -------------------------------------------------Exon 1.4b  PDB: I:138-170         Transcript 1 (1)
           Transcript 1 (2) ----------------------------Exon 1.3  PDB: I:88-138 UniProt: 88-138            -------------------------------- Transcript 1 (2)
                 3wgd I  60 HMSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNE 170
                                    69        79        89        99       109       119       129       139       149       159       169

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3WGD)

(no "CATH Domain" information available for 3WGD)

(no "Pfam Domain" information available for 3WGD)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H,I (TXND5_HUMAN | Q8NBS9)

molecular function
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0003756	protein disulfide isomerase activity	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.
biological process
	GO:0043277	apoptotic cell clearance	The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0043066	negative regulation of apoptotic process	Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
	GO:0006457	protein folding	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
	GO:0034976	response to endoplasmic reticulum stress	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stress acting at the endoplasmic reticulum. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.
cellular component
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0005788	endoplasmic reticulum lumen	The volume enclosed by the membranes of the endoplasmic reticulum.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0043202	lysosomal lumen	The volume enclosed within the lysosomal membrane.

Asymmetric Unit
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	3wgd
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	TXND5_HUMAN \| Q8NBS9
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	TXND5_HUMAN \| Q8NBS9	:	2diz 3uj1 3uvt 3wge 3wgx

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 31)

Sites (31, 31)

SS Bonds (11, 11)

Cis Peptide Bonds (9, 9)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 18)

Exons (3, 27)

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