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(-) Description

Title :  STRUCTURE OF FLGT, A FLAGELLAR BASAL BODY COMPONENT PROTEIN
 
Authors :  H. Terashima, M. Sakuma, M. Homma, K. Imada
Date :  14 Nov 12  (Deposition) - 03 Apr 13  (Release) - 14 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  H-Ring Formation, The Flagellar Basal Body, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Terashima, N. Li, M. Sakuma, M. Koike, S. Kojima, M. Homma, K. Imada
Insight Into The Assembly Mechanism In The Supramolecular Rings Of The Sodium-Driven Vibrio Flagellar Motor From The Structure Of Flgt
Proc. Natl. Acad. Sci. Usa V. 110 6133 2013
PubMed-ID: 23530206  |  Reference-DOI: 10.1073/PNAS.1222655110

(-) Compounds

Molecule 1 - FLAGELLA BASAL-BODY PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3A
    Expression System Strain: B834(DE3)/PLYSS
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: FLGT
    Organism Scientific: VIBRIO ALGINOLYTICUS
    Organism Taxid: 663

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 10)

Asymmetric/Biological Unit (1, 10)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3W1E)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:92 -A:264

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3W1E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3W1E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3W1E)

(-) Exons   (0, 0)

(no "Exon" information available for 3W1E)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:356
 aligned with D9N551_VIBAL | D9N551 from UniProtKB/TrEMBL  Length:377

    Alignment length:356
                                                                                                                                                                                                                                                                                                                                                                                           377  
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373   |  
         D9N551_VIBAL    24 SWYEVTGVATIVSSEETARLHALEDALFKAVNFSGADIGSISNLMPLLEESRNEYQFTNHEVRYILVESERKRRGKVEVKIRVDIYPSATGCHTDQYKKTILVGNIEVASPQQAVMGQIYQVGDDFSRVVNRQLDQTSRSFVSVGTTDYSISSNYPARTQMIAQDNGAQYIIGGVITDLTATVESQLLQDDIINRQFALEMKVFDGKTGHEVFNKAYREVARWPFAKTSQVDTRSARFWASTYGEMMLRVSRNIMLDLESELSCKITLPEVVAVFGNTVTMDLGRMHGVKEGDKLQLWHTASFIDQNGLPRNKVSQSEITLTVSRIYEHEAELTIDQPNLASSVQIGDVMNKIL--   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.hhhhh..hhhhhh....eee.....eeeeeeeeeeee..eeeeeeeeee.............eeeeeee.ee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhh..eeeeeeee......hhhhhhhhhhhhh..eeeeeeeee..eeee.......eeeeeeeeeeeeee.....eeeeeeeeeeee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee..eeee..hhhhh.....eeeeeeeeeee.....eeeeeeeeeeeeeeeee....eeeee.hhhhhhhh....eeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3w1e A   1 SWYEVTGVATIVSSEETARLHALEDALFKAVNFSGADIGSISNLmPLLEESRNEYQFTNHEVRYILVESERKRRGKVEVKIRVDIYPSATGCHTDQYKKTILVGNIEVASPQQAVmGQIYQVGDDFSRVVNRQLDQTSRSFVSVGTTDYSISSNYPARTQmIAQDNGAQYIIGGVITDLTATVESQLLQDDIINRQFALEmKVFDGKTGHEVFNKAYREVARWPFAKTSQVDTRSARFWASTYGEmmLRVSRNImLDLESELSCKITLPEVVAVFGNTVTmDLGRmHGVKEGDKLQLWHTASFIDQNGLPRNKVSQSEITLTVSRIYEHEAELTIDQPNLASSVQIGDVmNKILHH 356
                                    10        20        30        40    |   50        60        70        80        90       100       110     | 120       130       140       150       160|      170       180       190       200|      210       220       230       240     ||250    |  260       270       280|    | 290       300       310       320       330       340       350      
                                                                       45-MSE                                                                116-MSE                                      161-MSE                                 201-MSE                                      246-MSE  255-MSE                   281-MSE|                                                             350-MSE  
                                                                                                                                                                                                                                                                                247-MSE                                286-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3W1E)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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