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(-) Description

Title :  CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS BIOTIN PROTEIN LIGASE
 
Authors :  N. R. Pendini, M. Y. Yap
Date :  23 Dec 11  (Deposition) - 26 Dec 12  (Release) - 17 Jul 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Biotin, Metabolism, Biotin Carboxyl Carrier Protein, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. P. Soares Da Costa, W. Tieu, M. Y. Yap, N. R. Pendini, S. W. Polyak, D. Sejer Pedersen, R. Morona, J. D. Turnidge, J. C. Wallace, M. C. Wilce, G. W. Booker, A. D. Abell
Selective Inhibition Of Biotin Protein Ligase From Staphylococcus Aureus.
J. Biol. Chem. V. 287 17823 2012
PubMed-ID: 22437830  |  Reference-DOI: 10.1074/JBC.M112.356576

(-) Compounds

Molecule 1 - BIOTIN LIGASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SAOG_00031
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 553596
    Strain: A9781

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3V8J)

(-) Sites  (0, 0)

(no "Site" information available for 3V8J)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3V8J)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Lys A:15 -Pro A:16
2Trp A:176 -Pro A:177

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3V8J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3V8J)

(-) Exons   (0, 0)

(no "Exon" information available for 3V8J)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhh....hhhhhhhhhh.hhhhhhhhhhhhhhh..eeeee...eeeeee.....hhhhhhhhhhh.....eeeeeee..hhhhhhhhhh......eeeeeee...eeeeeeee.......hhhhhhhhhhhhhhhhhhh.....eeee...eeee..eeeeeeeeeeee....eeeeeeeeeee...hhhhh...hhhhh..hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee...eeeeeeeee.....eeeee....eeee...eee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3v8j A   1 SKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF 322
                                    10        20        30        40        50        60        70        80        90       100       110    || 135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285||     296       306       316      
                                                                                                                                            115|                                                                                                                                                        286|                                  
                                                                                                                                             131                                                                                                                                                         288
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3V8J)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3V8J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3V8J)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Lys A:15 - Pro A:16   [ RasMol ]  
    Trp A:176 - Pro A:177   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1hxd CRYSTAL STRUCTURE OF E. COLI BIOTIN REPRESSOR WITH BOUND BIOTIN
2cgh CRYSTAL STRUCTURE OF BIOTIN LIGASE FROM MYCOBACTERIUM TUBERCULOSIS
2eay CRYSTAL STRUCTURE OF BIOTIN PROTEIN LIGASE FROM AQUIFEX AEOLICUS
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3v8l