3UTO - JenaLib

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Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   TWITCHIN KINASE REGION FROM C.ELEGANS (FN31-NL-KIN-CRD-IG26)

Authors :   E. Castelmur, S. Barbieri, O. Mayans

Date :   26 Nov 11 (Deposition) - 08 Aug 12 (Release) - 12 Sep 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.40

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Kinase, Muscle Sarcomere, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Von Castelmur, J. Strumpfer, B. Franke, J. Bogomolovas, S. Barbieri, H. Qadota, P. V. Konarev, D. I. Svergun, S. Labeit, G. M. Benian, K. Schulten, O. Mayans
Identification Of An N-Terminal Inhibitory Extension As The Primary Mechanosensory Regulator Of Twitchin Kinase.
Proc. Natl. Acad. Sci. Usa V. 109 13608 2012
PubMed-ID: 22869697 | Reference-DOI: 10.1073/PNAS.1200697109

Molecule 1 - TWITCHIN
	Chains	:	A, B
	EC Number	:	2.7.11.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PETM-11
	Expression System Taxid	:	562
	Fragment	:	TWITCHIN KINASE REGION (FN3-NL-KIN-CRD-IG), UNP RESIDUES 6108-6675
	Gene	:	UNC-22, ZK617.1
	Organism Common	:	NEMATODE
	Organism Scientific	:	CAENORHABDITIS ELEGANS
	Organism Taxid	:	6239
	Synonym	:	UNCOORDINATED PROTEIN 22

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 4)

No.	Name	Count	Type	Full Name
1	FLC	1	Ligand/Ion	CITRATE ANION
2	GOL	1	Ligand/Ion	GLYCEROL
3	P33	1	Ligand/Ion	3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
4	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Biological Unit 1 (3, 3)

No.	Name	Count	Type	Full Name
1	FLC	1	Ligand/Ion	CITRATE ANION
2	GOL	1	Ligand/Ion	GLYCEROL
3	P33	-1	Ligand/Ion	3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
4	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	FLC	-1	Ligand/Ion	CITRATE ANION
2	GOL	-1	Ligand/Ion	GLYCEROL
3	P33	1	Ligand/Ion	3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
4	PEG	-1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:78	BINDING SITE FOR RESIDUE GOL A 571
2	AC2	SOFTWARE	ARG A:529 , TYR A:530 , ASP A:534 , HOH A:731 , VAL B:207	BINDING SITE FOR RESIDUE PEG A 572
3	AC3	SOFTWARE	THR A:401 , PHE A:482 , LYS A:485 , LYS A:561 , GLU A:563 , HOH A:668 , HOH A:711	BINDING SITE FOR RESIDUE FLC A 573
4	AC4	SOFTWARE	GLU A:270 , ARG A:502 , ASN A:533 , ASP A:534 , GLU B:270 , ASN B:271 , ARG B:502 , ASN B:533 , ASP B:534 , HOH B:620 , HOH B:784	BINDING SITE FOR RESIDUE P33 B 571

(no "SS Bond" information available for 3UTO)

Asymmetric Unit

No.	Residues
1	Pro A:417	-	Gly A:418
2	Leu A:446	-	Pro A:447
3	Leu B:446	-	Pro B:447

(no "SAP(SNP)/Variant" information available for 3UTO)

Asymmetric Unit (3, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	FN3	PS50853	Fibronectin type-III domain profile.	UNC22_CAEEL	1598-1690 1696-1791 1891-1988 1994-2087 2189-2282 2288-2383 2483-2576 2579-2675 2775-2868 2874-2968 3070-3165 3171-3265 3365-3459 3465-3559 3661-3753 3759-3853 3954-4047 4053-4146 4246-4340 4346-4440 4538-4631 4637-4733 4739-4834 4936-5028 5034-5129 5231-5326 5333-5427 5430-5528 5723-5817 5823-5919 6114-6207	2	- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A:9-100 B:9-102
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	UNC22_CAEEL	6267-6290	2	A:162-185 B:162-185
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	UNC22_CAEEL	6378-6390	2	A:273-285 B:273-285

Biological Unit 1 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	FN3	PS50853	Fibronectin type-III domain profile.	UNC22_CAEEL	1598-1690 1696-1791 1891-1988 1994-2087 2189-2282 2288-2383 2483-2576 2579-2675 2775-2868 2874-2968 3070-3165 3171-3265 3365-3459 3465-3559 3661-3753 3759-3853 3954-4047 4053-4146 4246-4340 4346-4440 4538-4631 4637-4733 4739-4834 4936-5028 5034-5129 5231-5326 5333-5427 5430-5528 5723-5817 5823-5919 6114-6207	1	- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A:9-100 -
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	UNC22_CAEEL	6267-6290	1	A:162-185 -
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	UNC22_CAEEL	6378-6390	1	A:273-285 -

Biological Unit 2 (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	FN3	PS50853	Fibronectin type-III domain profile.	UNC22_CAEEL	1598-1690 1696-1791 1891-1988 1994-2087 2189-2282 2288-2383 2483-2576 2579-2675 2775-2868 2874-2968 3070-3165 3171-3265 3365-3459 3465-3559 3661-3753 3759-3853 3954-4047 4053-4146 4246-4340 4346-4440 4538-4631 4637-4733 4739-4834 4936-5028 5034-5129 5231-5326 5333-5427 5430-5528 5723-5817 5823-5919 6114-6207	1	- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - B:9-102
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	UNC22_CAEEL	6267-6290	1	- B:162-185
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	UNC22_CAEEL	6378-6390	1	- B:273-285

(no "Exon" information available for 3UTO)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:559
 aligned with UNC22_CAEEL | Q23551 from UniProtKB/Swiss-Prot  Length:7158

    Alignment length:566
                                  6119      6129      6139      6149      6159      6169      6179      6189      6199      6209      6219      6229      6239      6249      6259      6269      6279      6289      6299      6309      6319      6329      6339      6349      6359      6369      6379      6389      6399      6409      6419      6429      6439      6449      6459      6469      6479      6489      6499      6509      6519      6529      6539      6549      6559      6569      6579      6589      6599      6609      6619      6629      6639      6649      6659      6669      
         UNC22_CAEEL   6110 DVPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 6675
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeee....eeeeee...........eeeeeeee......eeeeee...eeee.......eeeeeeeeee..ee.........ee..-------...ee.....ee........hhhhhh.hhhhhh..........hhhh.eeeeeeeeee..eeeeeeee.....eeeeeeee..hhhhhhhhhhhhhhhhhh.......eeeeee...eeeeeee.....hhhhhhh.....eehhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.......eee......ee.....eeeee..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh......hhhhh..hhhhhhhhhh....hhhhh.hhhhhhhh.............eehhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh.....eeeee.hhhhhh.eeee....eeee....eeeeeeee.....eeeeee..ee......eeeeee..eeeeee...hhhhheeeeeeeee..eeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----FN3  PDB: A:9-100 UniProt: 6114-6207                                                          -----------------------------------------------------------PROTEIN_KINASE_ATP      ---------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3uto A    5 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIP-------RGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT  570
                                    14        24        34        44        54        64        74        84        94     |   -   |   114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564      
                                                                                                                         100     108

Chain B from PDB  Type:PROTEIN  Length:566
 aligned with UNC22_CAEEL | Q23551 from UniProtKB/Swiss-Prot  Length:7158

    Alignment length:566
                                  6119      6129      6139      6149      6159      6169      6179      6189      6199      6209      6219      6229      6239      6249      6259      6269      6279      6289      6299      6309      6319      6329      6339      6349      6359      6369      6379      6389      6399      6409      6419      6429      6439      6449      6459      6469      6479      6489      6499      6509      6519      6529      6539      6549      6559      6569      6579      6589      6599      6609      6619      6629      6639      6649      6659      6669      
         UNC22_CAEEL   6110 DVPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 6675
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeee....eeeeee...........eeeeeee.......eeeeee...eeee.......eeeeeeeeee..ee.........ee.hhhhh......ee.....ee........hhhhhh.hhhhhh..........hhhh.eeeeeeeeee..eeeeeeee.....eeeeeeee..hhhhhhhhhhhhhhhhhh.......eeeeee...eeeeeee.....hhhhhhh.....eehhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.......eee......ee.....eeeee..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.............hhhhhhhhhh....hhhhh.hhhhhhhh.............eehhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh.....eeeee.hhhhhh.eeee....eee.....eeeeeeee.....eeeeee..........eeeeee..eeeeee...hhhhheeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----FN3  PDB: B:9-102 UniProt: 6114-6207                                                          -----------------------------------------------------------PROTEIN_KINASE_ATP      ---------------------------------------------------------------------------------------PROTEIN_KINAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3uto B    5 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT  570
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3UTO)

(no "CATH Domain" information available for 3UTO)

(no "Pfam Domain" information available for 3UTO)

Asymmetric Unit(hide GO term definitions)

Chain A,B (UNC22_CAEEL | Q23551)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0005516	calmodulin binding	Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0051782	negative regulation of cell division	Any process that stops, prevents, or reduces the frequency, rate or extent of cell division.
	GO:0018105	peptidyl-serine phosphorylation	The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.
	GO:0018107	peptidyl-threonine phosphorylation	The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
cellular component
	GO:0031672	A band	The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.

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	Cis Peptide Bonds
		Leu A:446 - Pro A:447	[ RasMol ]
		Leu B:446 - Pro B:447	[ RasMol ]
		Pro A:417 - Gly A:418	[ RasMol ]

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	UNC22_CAEEL \| Q23551	:	1koa 1wit 1wiu

Description

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Chains, Units

Ligands, Modified Residues, Ions (4, 4)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

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