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(-) Description

Title :  STRUCTURE OF MACROPHAGE MIGRATION INHIBITORY FACTOR FROM GIARDIA LAMBLIA
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  28 Jul 11  (Deposition) - 24 Aug 11  (Release) - 26 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Ssgcid, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. W. Buchko, J. Abendroth, H. Robinson, Y. Zhang, S. N. Hewitt, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Crystal Structure Of A Macrophage Migration Inhibitory Factor From Giardia Lamblia.
J. Struct. Funct. Genom. V. 14 47 2013
PubMed-ID: 23709284  |  Reference-DOI: 10.1007/S10969-013-9155-9

(-) Compounds

Molecule 1 - MACROPHAGE MIGRATION INHIBITORY FACTOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: GL50803_12091
    Organism Scientific: GIARDIA LAMBLIA
    Organism Taxid: 184922
    Strain: ATCC 50803
    Synonym: GILAA.00834.A

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2SO41Ligand/IonSULFATE ION
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2SO43Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:13 , LYS A:14BINDING SITE FOR RESIDUE SO4 A 115
2AC2SOFTWAREHIS A:87BINDING SITE FOR RESIDUE CL A 116

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(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:PROTEIN  Length:97
 aligned with A8BFP4_GIAIC | A8BFP4 from UniProtKB/TrEMBL  Length:114

    Alignment length:102
                             1                                                                                                    
                             |       9        19        29        39        49        59        69        79        89        99  
         A8BFP4_GIAIC     - -MPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKPVSYCMAGVRKADMSFGTSTDLCCFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYISFNE 101
               SCOP domains d3t5sa_ A: automated matches                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee....hhhhhhhhhhhhhhhhhhhhh.hhhhheeeeee............eeeeee...-----.hhhhhhhhhhhhhhhhh.hhh.eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 3t5s A   0 SMPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKPVSYCMAGVRKADMSFGTSTDLCCFVDFYCIG-----KNPSISAAITGCLTQHFKVKPERVYISFNE 101
                                     9        19        29        39        49        59      |  -  |     79        89        99  
                                                                                             66    72
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Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

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