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(-) Description

Title :  CRYSTAL STRUCTURE OF CERATO-PLATANIN 5 FROM M. PERNICIOSA (MPCP5)
 
Authors :  J. F. Oliveira, M. R. O. Barsottini, G. Zaparoli, L. O. Machado, S. M. G. D G. A. G. Pereira, A. L. B. Ambrosio
Date :  11 Jul 11  (Deposition) - 11 Jul 12  (Release) - 11 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.87
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Double Psi Beta Barrel, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. F. Oliveira, M. R. O. Barsottini, G. Zaparoli, L. O. Machado, S. M. G. Dias, G. A. G. Pereira, A. L. B. Ambrosio
Crystal Structure Of Cerato-Platanins From M. Perniciosa
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CERATO-PLATANIN-LIKE PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ORIGAMI II
    Expression System Taxid: 562
    Expression System Vector Type: PETSUMO
    Gene: CP5
    Organism Scientific: MONILIOPHTHORA PERNICIOSA
    Organism Taxid: 153609

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3SUM)

(-) Sites  (0, 0)

(no "Site" information available for 3SUM)

(-) SS Bonds  (12, 12)

Asymmetric Unit
No.Residues
1A:43 -A:80
2A:83 -A:145
3A:144 -A:153
4B:43 -B:80
5B:83 -B:145
6B:144 -B:153
7C:43 -C:80
8C:83 -C:145
9C:144 -C:153
10D:43 -D:80
11D:83 -D:145
12D:144 -D:153

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Phe A:67 -Pro A:68
2Phe B:67 -Pro B:68
3Phe C:67 -Pro C:68
4Phe D:67 -Pro D:68

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3SUM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3SUM)

(-) Exons   (0, 0)

(no "Exon" information available for 3SUM)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:135
 aligned with B2C3I4_MONPR | B2C3I4 from UniProtKB/TrEMBL  Length:156

    Alignment length:135
                                    31        41        51        61        71        81        91       101       111       121       131       141       151     
         B2C3I4_MONPR    22 NWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCGDP 156
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.hhhhh...hhhhh.hhhhhhh..........hhhhh.....eee..........eeeeee..eeeeeeeee......eeeehhhhhhhhh.....hhhhhhheee..eeeeehhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sum A  22 NWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCGDP 156
                                    31        41        51        61        71        81        91       101       111       121       131       141       151     


Chain B from PDB  Type:PROTEIN  Length:136
 aligned with B2C3I4_MONPR | B2C3I4 from UniProtKB/TrEMBL  Length:156

    Alignment length:136
                                    30        40        50        60        70        80        90       100       110       120       130       140       150      
         B2C3I4_MONPR    21 ANWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCGDP 156
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.hhhhh...hhhhh.hhhhhh...........hhhhh.....eeeee........eeeeee..eeeeeeeeeee....eeeehhhhhhhhhee..eehhhhhh.ee..eeeeehhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sum B  21 SNWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCGDP 156
                                    30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain C from PDB  Type:PROTEIN  Length:136
 aligned with B2C3I4_MONPR | B2C3I4 from UniProtKB/TrEMBL  Length:156

    Alignment length:136
                                    30        40        50        60        70        80        90       100       110       120       130       140       150      
         B2C3I4_MONPR    21 ANWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCGDP 156
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeehhhhh...hhhhh.hhhhhh...........hhhhh.....eee..........eeeeee..eeeeeeeee......eeeeehhhhhhhhee..eehhhhhheee..eeeeehhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sum C  21 SNWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCGDP 156
                                    30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain D from PDB  Type:PROTEIN  Length:133
 aligned with B2C3I4_MONPR | B2C3I4 from UniProtKB/TrEMBL  Length:156

    Alignment length:133
                                    31        41        51        61        71        81        91       101       111       121       131       141       151   
         B2C3I4_MONPR    22 NWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCG 154
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.hhhhh...hhhhh.hhhhhh...........hhhhh.....eee..........eeeeee..eeeeeeeee......eeeehhhhhhhhhee..ee......eee..eeeeehhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sum D  22 NWLIKWDDKFQNDTLSISEFKCSAALAKLGPDPKHPPTKLGEVLNFPHFVAAPEAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVDGSCCQQNTGKQCG 154
                                    31        41        51        61        71        81        91       101       111       121       131       141       151
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3SUM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3SUM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3SUM)

(-) Gene Ontology  (0, 0)

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    (no "Gene Ontology" information available for 3SUM)

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  Cis Peptide Bonds
    Phe A:67 - Pro A:68   [ RasMol ]  
    Phe B:67 - Pro B:68   [ RasMol ]  
    Phe C:67 - Pro C:68   [ RasMol ]  
    Phe D:67 - Pro D:68   [ RasMol ]  
 
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 Related Entries

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(-) Related Entries Specified in the PDB File

3suj CRYSTAL STRUCTURE OF CERATO-PLATANIN 1 FROM M. PERNICIOSA (MPCP1)
3suk CRYSTAL STRUCTURE OF CERATO-PLATANIN 2 FROM M. PERNICIOSA (MPCP2)
3sul CRYSTAL STRUCTURE OF CERATO-PLATANIN 3 FROM M. PERNICIOSA (MPCP3)