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(-) Description

Title :  CRYSTAL STRUCTURE OF A 2'-AZIDO-URIDINE-MODIFIED RNA
 
Authors :  E. Ennifar, R. Micura
Date :  26 May 11  (Deposition) - 11 Apr 12  (Release) - 11 Apr 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Hairpin Rna, Rna Labelling, 2'-Azido-Uridine, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. Fauster, M. Hartl, T. Santner, M. Aigner, C. Kreutz, K. Bister, E. Ennifar, R. Micura
2'-Azido Rna, A Versatile Tool For Chemical Biology: Synthesis, X-Ray Structure, Sirna Applications, Click Labeling.
Acs Chem. Biol. V. 7 581 2012
PubMed-ID: 22273279  |  Reference-DOI: 10.1021/CB200510K

(-) Compounds

Molecule 1 - ECOLI 23 S RRNA SARCIN RICIN LOOP
    ChainsA
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1UZR1Mod. Nucleotide2'-DEOXY-2'-TRIAZA-1,2-DIEN-2-IUM-1-YL-URIDINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

(no "Site" information available for 3S7C)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3S7C)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA/RNA  Length:27
                                                            
                3s7c A 2647 UGCuCCUAGUACGAGAGGACCGGAGUG 2673
                               |  2656      2666       
                               |                       
                            2650-UZR                   

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3S7C)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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