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(-) Description

Title :  STRUCTURE OF THE BACILLUS ANTHRACIS TETRAHYDROPICOLINATE SUCCINYLTRANSFERASE
 
Authors :  S. M. Anderson, Z. Wawrzak, O. Onopriyenko, S. N. Peterson, W. F. Anders A. Savchenko, Center For Structural Genomics Of Infectious Di (Csgid)
Date :  24 Mar 11  (Deposition) - 20 Apr 11  (Release) - 20 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Keywords :  Structural Genomics, Csgid, Center For Structural Genomics Of Infectious Diseases, 2 Domains- 3-Layer(Aba) Sandwich And 3 Solenoid, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Anderson, Z. Wawrzak, O. Onopriyenko, S. N. Peterson, W. F. Anderson, A. Savchenko, Center For Structural Genomics Of Infectious Diseases (Csgid)
Structure Of The Bacillus Anthracis Tetrahydropicolinate Succinyltransferase
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - 2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N- ACETYLTRANSFERASE
    Chains: A, B, C, D, E, F
    EC Number: 2.3.1.89
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21-CODONPLUS(DE3)-RIPL
    Expression System Taxid: 511693
    Gene: DAPH, BA_4194, GBAA_4194, BAS3891
    Organism Common: ANTHRAX,ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 1392
    Strain: AMES
    Synonym: TETRAHYDRODIPICOLINATE N-ACETYLTRANSFERASE, THP ACETYLTRANSFERASE, TETRAHYDROPICOLINATE ACETYLASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABC   
Biological Unit 2 (1x):    DEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 9)

Asymmetric Unit (1, 9)
No.NameCountTypeFull Name
1CA9Ligand/IonCALCIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:119 , GLY A:137 , GLY A:138 , HOH B:1195BINDING SITE FOR RESIDUE CA A 241
2AC2SOFTWAREASN A:115 , HOH A:1300 , ASN B:115 , HOH B:258 , ASN C:115 , HOH C:255BINDING SITE FOR RESIDUE CA A 242
3AC3SOFTWARELYS B:88BINDING SITE FOR RESIDUE CA B 241
4AC4SOFTWAREHOH A:275 , ASN C:119 , GLY C:138BINDING SITE FOR RESIDUE CA C 241
5AC5SOFTWAREASN D:115 , HOH D:1549 , ASN E:115 , HOH E:257 , ASN F:115 , HOH F:276BINDING SITE FOR RESIDUE CA D 241
6AC6SOFTWAREASN D:119 , GLY D:137 , GLY D:138 , HOH E:268 , HOH E:305BINDING SITE FOR RESIDUE CA D 242
7AC7SOFTWAREASN F:119 , GLY F:138BINDING SITE FOR RESIDUE CA F 241
8AC8SOFTWARELYS F:164 , HOH F:594 , HOH F:758BINDING SITE FOR RESIDUE CA F 242
9AC9SOFTWAREGLY F:156 , GLU F:182 , HOH F:274 , HOH F:600BINDING SITE FOR RESIDUE CA F 243

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3R8Y)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Glu A:159 -Pro A:160
2Thr A:211 -Pro A:212
3Glu B:159 -Pro B:160
4Thr B:211 -Pro B:212
5Glu C:159 -Pro C:160
6Thr C:211 -Pro C:212
7Glu D:159 -Pro D:160
8Thr D:211 -Pro D:212
9Glu E:159 -Pro E:160
10Thr E:211 -Pro E:212
11Glu F:159 -Pro F:160
12Thr F:211 -Pro F:212

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3R8Y)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HEXAPEP_TRANSFERASESPS00101 Hexapeptide-repeat containing-transferases signature.DAPH_BACAN174-202
 
 
 
 
 		  6A:174-202
B:174-202
C:174-202
D:174-202
E:174-202
F:174-202
Biological Unit 1 (1, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HEXAPEP_TRANSFERASESPS00101 Hexapeptide-repeat containing-transferases signature.DAPH_BACAN174-202
 
 
 
 
 		  3A:174-202
B:174-202
C:174-202
-
-
-
Biological Unit 2 (1, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HEXAPEP_TRANSFERASESPS00101 Hexapeptide-repeat containing-transferases signature.DAPH_BACAN174-202
 
 
 
 
 		  3-
-
-
D:174-202
E:174-202
F:174-202

(-) Exons   (0, 0)

(no "Exon" information available for 3R8Y)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:203
 aligned with DAPH_BACAN | Q81MQ2 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:203
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216   
           DAPH_BACAN    17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEI 219
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee.hhhh......eeee...eeeeeeehhhhhhhhhhh...eeeeeeee.................ee....ee....ee....ee....ee....ee....ee....ee....ee....ee....ee............ee....ee....ee....ee....ee....ee.......eeee....eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         ----------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r8y A  17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEI 219
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216   


Chain B from PDB  Type:PROTEIN  Length:213
 aligned with DAPH_BACAN | Q81MQ2 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:213
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214   
           DAPH_BACAN     5 DANEIISFIQKSEKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIK 217
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh....eeeeeeee.hhhh......eeee...eeeeeeehhhhhhhhhhh...eeeeeeee.................ee....ee....ee....ee....ee....ee....ee....ee....ee....ee....ee............ee....ee....ee....ee....ee....ee........eee....eeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         --------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r8y B   5 DANEIISFIQKSEKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIK 217
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214   


Chain C from PDB  Type:PROTEIN  Length:201
 aligned with DAPH_BACAN | Q81MQ2 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:201
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216 
           DAPH_BACAN    17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIK 217
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee.hhhh......eeee...eeeeeeehhhhhhhhhhh...eeeeeee..................ee....ee....ee....ee....ee....ee....ee....ee....ee....ee....ee............ee....ee....ee....ee....ee....ee........eee....eeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         --------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r8y C  17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIK 217
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216 


Chain D from PDB  Type:PROTEIN  Length:203
 aligned with DAPH_BACAN | Q81MQ2 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:203
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216   
           DAPH_BACAN    17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEI 219
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee.hhhh......eeee...eeeeeeehhhhhhhhhhh...eeeeeee..................ee....ee....ee....ee....ee....ee....ee....ee....ee....ee....ee............ee....ee....ee....ee....ee....ee.......eeee....eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         ----------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r8y D  17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEI 219
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216   


Chain E from PDB  Type:PROTEIN  Length:212
 aligned with DAPH_BACAN | Q81MQ2 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:212
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214  
           DAPH_BACAN     5 DANEIISFIQKSEKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVI 216
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh....eeeeeeee.hhhh......eeee...eeeeeeehhhhhhhhhhh...eeeeeee..................ee....ee....ee....ee....ee....ee....ee....ee....ee....ee....ee............ee....ee....ee....ee....ee....ee........eee....ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         -------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r8y E   5 DANEIISFIQKSEKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVI 216
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214  


Chain F from PDB  Type:PROTEIN  Length:202
 aligned with DAPH_BACAN | Q81MQ2 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:202
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216  
           DAPH_BACAN    17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKE 218
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) DapH_N-3r8yF01 F:17-87                                                 -----------------------------------------------------------------------------Hexapep-3r8yF07 F:165-200           ------------------ Pfam domains (1)
           Pfam domains (2) DapH_N-3r8yF02 F:17-87                                                 -----------------------------------------------------------------------------Hexapep-3r8yF08 F:165-200           ------------------ Pfam domains (2)
           Pfam domains (3) DapH_N-3r8yF03 F:17-87                                                 -----------------------------------------------------------------------------Hexapep-3r8yF09 F:165-200           ------------------ Pfam domains (3)
           Pfam domains (4) DapH_N-3r8yF04 F:17-87                                                 -----------------------------------------------------------------------------Hexapep-3r8yF10 F:165-200           ------------------ Pfam domains (4)
           Pfam domains (5) DapH_N-3r8yF05 F:17-87                                                 -----------------------------------------------------------------------------Hexapep-3r8yF11 F:165-200           ------------------ Pfam domains (5)
           Pfam domains (6) DapH_N-3r8yF06 F:17-87                                                 -----------------------------------------------------------------------------Hexapep-3r8yF12 F:165-200           ------------------ Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF13 F:165-200           ------------------ Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF14 F:165-200           ------------------ Pfam domains (8)
           Pfam domains (9) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF15 F:165-200           ------------------ Pfam domains (9)
          Pfam domains (10) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF16 F:165-200           ------------------ Pfam domains (10)
          Pfam domains (11) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF17 F:165-200           ------------------ Pfam domains (11)
          Pfam domains (12) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF18 F:165-200           ------------------ Pfam domains (12)
          Pfam domains (13) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF19 F:165-200           ------------------ Pfam domains (13)
          Pfam domains (14) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF20 F:165-200           ------------------ Pfam domains (14)
          Pfam domains (15) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF21 F:165-200           ------------------ Pfam domains (15)
          Pfam domains (16) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF22 F:165-200           ------------------ Pfam domains (16)
          Pfam domains (17) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF23 F:165-200           ------------------ Pfam domains (17)
          Pfam domains (18) ----------------------------------------------------------------------------------------------------------------------------------------------------Hexapep-3r8yF24 F:165-200           ------------------ Pfam domains (18)
         Sec.struct. author ....eeeeeeee.hhhh......eeee...eeeeeeehhhhhhhhhhh...eeeeeee..................ee....ee....ee....ee....ee....ee....ee....ee....ee....ee....ee............ee....ee....ee....ee....ee....ee........eee....eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         ---------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r8y F  17 EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGVLFGEWSEIKTILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKE 218
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3R8Y)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3R8Y)

(-) Pfam Domains  (2, 24)

Asymmetric Unit
(-)
Clan: no clan defined [family: DapH_N] (1)
(-)
Clan: no clan defined [family: Hexapep] (52)
(-)
Family: Hexapep (52)
(-)
Bacillus anthracis (1)
2aHexapep-3r8yF07F:165-200
2bHexapep-3r8yF08F:165-200
2cHexapep-3r8yF09F:165-200
2dHexapep-3r8yF10F:165-200
2eHexapep-3r8yF11F:165-200
2fHexapep-3r8yF12F:165-200
2gHexapep-3r8yF13F:165-200
2hHexapep-3r8yF14F:165-200
2iHexapep-3r8yF15F:165-200
2jHexapep-3r8yF16F:165-200
2kHexapep-3r8yF17F:165-200
2lHexapep-3r8yF18F:165-200
2mHexapep-3r8yF19F:165-200
2nHexapep-3r8yF20F:165-200
2oHexapep-3r8yF21F:165-200
2pHexapep-3r8yF22F:165-200
2qHexapep-3r8yF23F:165-200
2rHexapep-3r8yF24F:165-200

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (DAPH_BACAN | Q81MQ2)
molecular function
    GO:0016407    acetyltransferase activity    Catalysis of the transfer of an acetyl group to an acceptor molecule.
    GO:0047200    tetrahydrodipicolinate N-acetyltransferase activity    Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H(2)O = L-2-acetamido-6-oxopimelate + CoA.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0019877    diaminopimelate biosynthetic process    The chemical reactions and pathways resulting in the formation of diaminopimelate, both as an intermediate in lysine biosynthesis and as a component (as meso-diaminopimelate) of the peptidoglycan of Gram-negative bacterial cell walls.
    GO:0009085    lysine biosynthetic process    The chemical reactions and pathways resulting in the formation of lysine, 2,6-diaminohexanoic acid.
    GO:0009089    lysine biosynthetic process via diaminopimelate    The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.

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  Cis Peptide Bonds
    Glu A:159 - Pro A:160   [ RasMol ]  
    Glu B:159 - Pro B:160   [ RasMol ]  
    Glu C:159 - Pro C:160   [ RasMol ]  
    Glu D:159 - Pro D:160   [ RasMol ]  
    Glu E:159 - Pro E:160   [ RasMol ]  
    Glu F:159 - Pro F:160   [ RasMol ]  
    Thr A:211 - Pro A:212   [ RasMol ]  
    Thr B:211 - Pro B:212   [ RasMol ]  
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