Chain A from PDB Type:PROTEIN Length:125
aligned with D8VN48_9ZZZZ | D8VN48 from UniProtKB/TrEMBL Length:127
Alignment length:125
12 22 32 42 52 62 72 82 92 102 112 122
D8VN48_9ZZZZ 3 NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
SCOP domains d3r0pa_ A: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eee..............eeee..eeeeeee.............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
3r0p A 3 NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
12 22 32 42 52 62 72 82 92 102 112 122
Chain B from PDB Type:PROTEIN Length:125
aligned with D8VN48_9ZZZZ | D8VN48 from UniProtKB/TrEMBL Length:127
Alignment length:125
12 22 32 42 52 62 72 82 92 102 112 122
D8VN48_9ZZZZ 3 NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
SCOP domains d3r0pb_ B: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee..............eeee..eeeeeee.............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
3r0p B 3 NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
12 22 32 42 52 62 72 82 92 102 112 122
Chain C from PDB Type:PROTEIN Length:127
aligned with D8VN48_9ZZZZ | D8VN48 from UniProtKB/TrEMBL Length:127
Alignment length:127
10 20 30 40 50 60 70 80 90 100 110 120
D8VN48_9ZZZZ 1 MTNKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
SCOP domains d3r0pc_ C: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..............eeee..eeeeeee..ee....ee...hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
3r0p C 1 MTNKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
10 20 30 40 50 60 70 80 90 100 110 120
Chain D from PDB Type:PROTEIN Length:126
aligned with D8VN48_9ZZZZ | D8VN48 from UniProtKB/TrEMBL Length:127
Alignment length:126
11 21 31 41 51 61 71 81 91 101 111 121
D8VN48_9ZZZZ 2 TNKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
SCOP domains d3r0pd_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeee..............eeee..eeeeeee.............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
3r0p D 2 TNKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
11 21 31 41 51 61 71 81 91 101 111 121
Chain E from PDB Type:PROTEIN Length:125
aligned with D8VN48_9ZZZZ | D8VN48 from UniProtKB/TrEMBL Length:127
Alignment length:125
12 22 32 42 52 62 72 82 92 102 112 122
D8VN48_9ZZZZ 3 NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
SCOP domains d3r0pe_ E: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eee..............eeee..eeeeeee..ee....ee...hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
3r0p E 3 NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
12 22 32 42 52 62 72 82 92 102 112 122
Chain F from PDB Type:PROTEIN Length:126
aligned with D8VN48_9ZZZZ | D8VN48 from UniProtKB/TrEMBL Length:127
Alignment length:126
11 21 31 41 51 61 71 81 91 101 111 121
D8VN48_9ZZZZ 2 TNKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
SCOP domains d3r0pf_ F: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) -------Ribonuc_L-PSP-3r0pF01 F:9-127 Pfam domains (1)
Pfam domains (2) -------Ribonuc_L-PSP-3r0pF02 F:9-127 Pfam domains (2)
Pfam domains (3) -------Ribonuc_L-PSP-3r0pF03 F:9-127 Pfam domains (3)
Pfam domains (4) -------Ribonuc_L-PSP-3r0pF04 F:9-127 Pfam domains (4)
Pfam domains (5) -------Ribonuc_L-PSP-3r0pF05 F:9-127 Pfam domains (5)
Pfam domains (6) -------Ribonuc_L-PSP-3r0pF06 F:9-127 Pfam domains (6)
Sec.struct. author ..eeee..............eeee..eeeeeee.............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhh........eeeeee...hhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
3r0p F 2 TNKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLVEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQAPYPARAAIGINQLPRASLIEADGIMVI 127
11 21 31 41 51 61 71 81 91 101 111 121
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |